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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 40559.M7U181 |
| ProteomeId | EsuBft1106_6 |
| Protein domains | IPR001584 |
| Protein domains | IPR013103 |
| Protein domains | IPR012337 |
| Protein domains | PTHR11439 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | copia protein os:drosophila melanogaster gn:gip pe:1 sv:3 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 4751|Fungi |
| Length | 2583 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.51e-29 |
| EggNOG OGs | COG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3NUZ7@4751|Fungi,3QNZW@4890|Ascomycota,20YYK@147548|Leotiomycetes |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Reverse transcriptase (RNA-dependent DNA polymerase) |
| COG category | L |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0003676 |
| GO | 0005515 |
| EC | 3.1 |
| GO | 0015074 |
| GO | 0004518 |
| GO | 0016740 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1106_6a-0001 ID=EsuBft1106_6a-0001|Name=EsuBft1106_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2583bp|location=Sequence derived from alignment at Scaffold_210:66344..69332+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTGTGTCGGGTCCAGGGAAGACACCTTTCAATGTCGGCAATGCACA AAAGGTTATGGATATTAACACGTTCCATAACCGTGCCGGCCACTTGTCCG AACCCATTTTGAGACTGTCCGCGAAGCAGCACGGGATTACCCTCACGGGC ACGATGGACAGCTGCCGATGGTGCTTGCCGGCGGGTGGGAAGAGGGCGCC GGTGCCGAAGCAGGGGGGCGGGTACCGCGGCAAGAGGGCGCCGAACGACG TGTTCCACATCGACCTCTGCGGCGCGTACACGGCGACGATCGGTGGCAAC CACTATATGCTCTTCGGTGTGAACGCCGCCACGGGATGGATGGTCTGCTA CGCCATGCGGCGTAAGTCGGAGGCGCTAGCGGTCGTCAAGCACGTGGTCG TGGATGCTGCCCACAAGGCTGGTACCGCGATCAAGTGCATCCGCTGCGAC TGCGATGCCCTCTGGACCAGCAGCGACTTCAAGGAGTTCTGTGCCAGCAT GGGGATCGCGCTTGAGTACTCCCCTTCAGGAGTGCAGCAGTACAACGGCG TCGTCGAGAGCGACATCCAGAGGTGCCTCAAGGTGGCCAAGGCACCCCGC TGGGTCGCCCAGGAGCTGCATGGCCCCGCAAGATTTTCTCGGTTCCGCGG ACTGAGTGTTCGTGGCGATGAGCTCTGGGCGGAGTCCGCCAAAGACGCCG CGCAGAAGCTGAACCAGTCAGCATCTCCTTCCAACCTCGGGGCTGCTGCC GCCGCCGGACCGTCTTTGCCGCCGCCGCCTTCGGGGCCCGCGTTGTGGCC CGCGCCTTTGCCTGGTGCTGCCGCTCCGCCGCTCCCGAGGCCGCCCGCGT CATCGACATCCGCCGTCTCACCGCCGCCCGCTGCTGCTGCCGCCGCCGGA CCGTCGCCGTCGCCGCCGCCTCCAGGGTCTGCGCCGCTGTGGCCGTCGCC GCCGCTCCCGGACTGGTCGTCGACATCCATTGAGGCTGAGCAGTCCCCGC CGCAACCGCACCAAGATCGGCGGACCACACAGTCGGCGACCGCACCGGGG TACGCACCTCTCACGCCCCATGCTTCGAGACTGCTAGGCGAGGGGGGAGA TCCGCGGATCCGAGGACGCACGAGAGCGGAAGCGCGCACCATCGCCCAGC AACAGCTTTCTGCCCTATCGGTGGACCGGCAGTTGCCATCACTGCAGGAA GATGCCGTCACCACGCCTTTCCCTCCGACCGAAATCACCATGGGGCTGCT GGCTCAAGCAAACGAAGACGTCCTCCTCTCCATGCTGGATGCTCGGCGAT TCATGAACGGCAAGACAATGCTCCGGCCAGGATTGGAGGAGGGCGGCGAG AAGGGGGGCCAAGGCGAGCAGCTCGCGAGGAGTGAGGGCGTGGGAGAGAG CACGGGAAAGATGCCGGAGGTGGACATCGGCGAGGAGGGACGCATGGGGA ATGGTTGGTCGATCGGTTCGTCTGAGCGGGGCGTTCCGCTCGGACTTGTG GCGCGTCTTGCGACGCGCGACGACCTCGACGCATCTGTGCGCGAGATGGA GCCGCCTCTCTTGCGACTCGACATGCCGCGCTGCCACGCCAAGGACCTCC GAGTNTTCATGAACGGCAAGACAATGCTCCGGCCAGGATTGGAGGAGGGC GGCGAGAAGGGGGGCCAAGGCGAGCAGCTCGCGAGGAGTGAGGGCGTGGG AGAGAGCACGGGAAAGATGCCGGAGGTGGACATCGGCGAGGAGGGACGCA TGGGGAATGGTTGGTCGATCGGTCCGTCTGAGCGGGGCGTTCCGCTCGGA CTTGTGGCGCGTCTTGCGACGCGCGACGACCTCGACTCAGCTGTGCGCGA GANGCCGCGCTGCCACGCCAAGGACCTCCGAGTACCCCAGACTTTCAAAG ACGCAAAGCAGTGCGAGCACAGCGAGCAGTTCATGGATGCGGTCAAGCAT AACTACATCAAGTCGAAGTTGATTTTTGATTGGAAGGTAGATGCGTTCGG CTTTCCTACGAAGGCCAAGGCTAGACTTGTTGCGAGAGGAGACATGCAGA AGGAGTGCATTGACTTTGGTGATTCGTATGCACCTACTGTAACTTCATCT AGTGTTCGTATGTTGGCAGCTTTGGCGTGTGAGCTTGACTTGGAACTGTG TCACTTCGATATCGACCAGGCTTTTGTGAGGGCCCTGCTCAAGGAAGATA TTTTCATGCGACTGCCGGAAGGATGTGGTGCGTTGTCGGGGAAGATAGTG CAGTTGAACAAGAGCCTTTATGGCTTGAGGCAGGCATCTAGAGAGTGGTA CGCGTTACTGAAGAAGTGTCTTTCGGCTTTGGGGTTCGAGCAGTGCATGA TGACTGATTCGTGTGTTTTTCGTTTAGTCGAAGGGGGGGAAGTAGTGTTG CTACTTGTAGTACACGTAGACGATATTTTTGCTGTGGGGACGAAGGCGAG GTGTGATCAATTCGGCAAGGACGTGGGAGAGTACGTGCCAGTGAAGTTTC TAGGGGAGTTGAAGTGGTACTCCGGTTGCTATTACGAGAGGGACAGAGAG GCAGGCAGGCTGACGCTTTCACAGCAGACATAG back to topprotein sequence of EsuBft1106_6a-0001 >EsuBft1106_6 ID=EsuBft1106_6|Name=EsuBft1106_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=860bp
MAVSGPGKTPFNVGNAQKVMDINTFHNRAGHLSEPILRLSAKQHGITLTG TMDSCRWCLPAGGKRAPVPKQGGGYRGKRAPNDVFHIDLCGAYTATIGGN HYMLFGVNAATGWMVCYAMRRKSEALAVVKHVVVDAAHKAGTAIKCIRCD CDALWTSSDFKEFCASMGIALEYSPSGVQQYNGVVESDIQRCLKVAKAPR WVAQELHGPARFSRFRGLSVRGDELWAESAKDAAQKLNQSASPSNLGAAA AAGPSLPPPPSGPALWPAPLPGAAAPPLPRPPASSTSAVSPPPAAAAAAG PSPSPPPPGSAPLWPSPPLPDWSSTSIEAEQSPPQPHQDRRTTQSATAPG YAPLTPHASRLLGEGGDPRIRGRTRAEARTIAQQQLSALSVDRQLPSLQE DAVTTPFPPTEITMGLLAQANEDVLLSMLDARRFMNGKTMLRPGLEEGGE KGGQGEQLARSEGVGESTGKMPEVDIGEEGRMGNGWSIGSSERGVPLGLV ARLATRDDLDASVREMEPPLLRLDMPRCHAKDLRVFMNGKTMLRPGLEEG GEKGGQGEQLARSEGVGESTGKMPEVDIGEEGRMGNGWSIGPSERGVPLG LVARLATRDDLDSAVREXPRCHAKDLRVPQTFKDAKQCEHSEQFMDAVKH NYIKSKLIFDWKVDAFGFPTKAKARLVARGDMQKECIDFGDSYAPTVTSS SVRMLAALACELDLELCHFDIDQAFVRALLKEDIFMRLPEGCGALSGKIV QLNKSLYGLRQASREWYALLKKCLSALGFEQCMMTDSCVFRLVEGGEVVL LLVVHVDDIFAVGTKARCDQFGKDVGEYVPVKFLGELKWYSGCYYERDRE AGRLTLSQQT back to topmRNA from alignment at Scaffold_210:66344..69332+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1106_6a-0001 ID=EsuBft1106_6a-0001|Name=EsuBft1106_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2989bp|location=Sequence derived from alignment at Scaffold_210:66344..69332+ (Ectocarpus subulatus male Bft15b) ATGGCTGTGTCGGGTCCAGGGAAGACACCTTTCAATGTCGGCAATGCACA
AAAGGTTATGGATATTAACACGTTCCATAACCGTGCCGGCCACTTGTCCG
AACCCATTTTGAGACTGTCCGCGAAGCAGCACGGGATTACCCTCACGGGC
ACGATGGACAGCTGCCGATGGTGCTTGCCGGCGGGTGGGAAGAGGGCGCC
GGTGCCGAAGCAGGGGGGCGGGTACCGCGGCAAGAGGGCGCCGAACGACG
TGTTCCACATCGACCTCTGCGGCGCGTACACGGCGACGATCGGTGGCAAC
CACTATATGCTCTTCGGTGTGAACGCCGCCACGGGATGGATGGTCTGCTA
CGCCATGCGGCGTAAGTCGGAGGCGCTAGCGGTCGTCAAGCACGTGGTCG
TGGATGCTGCCCACAAGGCTGGTACCGCGATCAAGTGCATCCGCTGCGAC
TGCGATGCCCTCTGGACCAGCAGCGACTTCAAGGAGTTCTGTGCCAGCAT
GGGGATCGCGCTTGAGTACTCCCCTTCAGGAGTGCAGCAGTACAACGGCG
TCGTCGAGAGCGACATCCAGAGGTGCCTCAAGGTGGCCAAGGCACCCCGC
TGGGTCGCCCAGGAGCTGCATGGCCCCGCAAGATTTTCTCGGTTCCGCGG
ACTGAGTGTTCGTGGCGATGAGCTCTGGGCGGAGTCCGCCAAAGACGCCG
CGCAGAAGCTGAACCAGTCAGCATCTCCTTCCAACCTCGGGGGTGCGTCG
TTCTTCCAGTACGGTTTCATGTGGGAACGGCCGGCGGCGAAAATGGACGA
CAGGGCCGTGCCGTGATTTTTCCTCGACGCCGGGGGCAACCATGCCGACG
TCACGGTTAAGGTGCTCAAGGAGAGGACCGGCCACGTGTGCTACACCTCC
AATGTAGTTTGGGCGGCGCTCCCGCCGTCGNNNNNNNNNNNNNNNNGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GAGCAATGCTTCACCAACCCCCTCCGCGAGGACTCTACCCACGCCCCAGC
ATCTACCCTTCGAGATTGTCGCTTCGCCGTCGCCAGCTGCTGCCGCCGCC
GGACCGTCTTTGCCGCCGCCGCCTTCGGGGCCCGCGTTGTGGCCCGCGCC
TTTGCCTGGTGCTGCCGCTCCGCCGCTCCCGAGGCCGCCCGCGTCATCGA
CATCCGCCGTCTCACCGCCGCCCGCTGCTGCTGCCGCCGCCGGACCGTCG
CCGTCGCCGCCGCCTCCAGGGTCTGCGCCGCTGTGGCCGTCGCCGCCGCT
CCCGGACTGGTCGTCGACATCCATTGAGGCTGAGCAGTCCCCGCCGCAAC
CGCACCAAGATCGGCGGACCACACAGTCGGCGACCGCACCGGGGTACGCA
CCTCTCACGCCCCATGCTTCGAGACTGCTAGGCGAGGGGGGAGATCCGCG
GATCCGAGGACGCACGAGAGCGGAAGCGCGCACCATCGCCCAGCAACAGC
TTTCTGCCCTATCGGTGGACCGGCAGTTGCCATCACTGCAGGAAGATGCC
GTCACCACGCCTTTCCCTCCGACCGAAATCACCATGGGGCTGCTGGCTCA
AGCAAACGAAGACGTCCTCCTCTCCATGCTGGATGCTCGGCGATTCATGA
ACGGCAAGACAATGCTCCGGCCAGGATTGGAGGAGGGCGGCGAGAAGGGG
GGCCAAGGCGAGCAGCTCGCGAGGAGTGAGGGCGTGGGAGAGAGCACGGG
AAAGATGCCGGAGGTGGACATCGGCGAGGAGGGACGCATGGGGAATGGTT
GGTCGATCGGTTCGTCTGAGCGGGGCGTTCCGCTCGGACTTGTGGCGCGT
CTTGCGACGCGCGACGACCTCGACGCATCTGTGCGCGAGATGGAGCCGCC
TCTCTTGCGACTCGACATGCCGCGCTGCCACGCCAAGGACCTCCGAGTNT
TCATGAACGGCAAGACAATGCTCCGGCCAGGATTGGAGGAGGGCGGCGAG
AAGGGGGGCCAAGGCGAGCAGCTCGCGAGGAGTGAGGGCGTGGGAGAGAG
CACGGGAAAGATGCCGGAGGTGGACATCGGCGAGGAGGGACGCATGGGGA
ATGGTTGGTCGATCGGTCCGTCTGAGCGGGGCGTTCCGCTCGGACTTGTG
GCGCGTCTTGCGACGCGCGACGACCTCGACTCAGCTGTGCGCGAGANGCC
GCGCTGCCACGCCAAGGACCTCCGAGTACCCCAGACTTTCAAAGACGCAA
AGCAGTGCGAGCACAGCGAGCAGTTCATGGATGCGGTCAAGCGTGAGGGG
TTTGGATTGCTAGAAGCAGAGGCGTTGAAGATTTTGGACCGTAGCAGCGA
ATAGATAACTACATCAAGTCGAAGTTGATTTTTGATTGGAAGGTAGATGC
GTTCGGCTTTCCTACGAAGGCCAAGGCTAGACTTGTTGCGAGAGGAGACA
TGCAGAAGGAGTGCATTGACTTTGGTGATTCGTATGCACCTACTGTAACT
TCATCTAGTGTTCGTATGTTGGCAGCTTTGGCGTGTGAGCTTGACTTGGA
ACTGTGTCACTTCGATATCGACCAGGCTTTTGTGAGGGCCCTGCTCAAGG
AAGATATTTTCATGCGACTGCCGGAAGGATGTGGTGCGTTGTCGGGGAAG
ATAGTGCAGTTGAACAAGAGCCTTTATGGCTTGAGGCAGGCATCTAGAGA
GTGGTACGCGTTACTGAAGAAGTGTCTTTCGGCTTTGGGGTTCGAGCAGT
GCATGATGACTGATTCGTGTGTTTTTCGTTTAGTCGAAGGGGGGGAAGTA
GTGTTGCTACTTGTAGTACACGTAGACGATATTTTTGCTGTGGGGACGAA
GGCGAGGTGTGATCAATTCGGCAAGGACGTGGGAGAGTACGTGCCAGTGA
AGTTTCTAGGGGAGTTGAAGTGGTACTCCGGTTGCTATTACGAGAGGGAC
AGAGAGGCAGGCAGGCTGACGCTTTCACAGCAGACATAG back to topCoding sequence (CDS) from alignment at Scaffold_210:66344..69332+ >EsuBft1106_6a-0001 ID=EsuBft1106_6a-0001|Name=EsuBft1106_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2583bp|location=Sequence derived from alignment at Scaffold_210:66344..69332+ (Ectocarpus subulatus male Bft15b) ATGGCTGTGTCGGGTCCAGGGAAGACACCTTTCAATGTCGGCAATGCACA AAAGGTTATGGATATTAACACGTTCCATAACCGTGCCGGCCACTTGTCCG AACCCATTTTGAGACTGTCCGCGAAGCAGCACGGGATTACCCTCACGGGC ACGATGGACAGCTGCCGATGGTGCTTGCCGGCGGGTGGGAAGAGGGCGCC GGTGCCGAAGCAGGGGGGCGGGTACCGCGGCAAGAGGGCGCCGAACGACG TGTTCCACATCGACCTCTGCGGCGCGTACACGGCGACGATCGGTGGCAAC CACTATATGCTCTTCGGTGTGAACGCCGCCACGGGATGGATGGTCTGCTA CGCCATGCGGCGTAAGTCGGAGGCGCTAGCGGTCGTCAAGCACGTGGTCG TGGATGCTGCCCACAAGGCTGGTACCGCGATCAAGTGCATCCGCTGCGAC TGCGATGCCCTCTGGACCAGCAGCGACTTCAAGGAGTTCTGTGCCAGCAT GGGGATCGCGCTTGAGTACTCCCCTTCAGGAGTGCAGCAGTACAACGGCG TCGTCGAGAGCGACATCCAGAGGTGCCTCAAGGTGGCCAAGGCACCCCGC TGGGTCGCCCAGGAGCTGCATGGCCCCGCAAGATTTTCTCGGTTCCGCGG ACTGAGTGTTCGTGGCGATGAGCTCTGGGCGGAGTCCGCCAAAGACGCCG CGCAGAAGCTGAACCAGTCAGCATCTCCTTCCAACCTCGGGGCTGCTGCC GCCGCCGGACCGTCTTTGCCGCCGCCGCCTTCGGGGCCCGCGTTGTGGCC CGCGCCTTTGCCTGGTGCTGCCGCTCCGCCGCTCCCGAGGCCGCCCGCGT CATCGACATCCGCCGTCTCACCGCCGCCCGCTGCTGCTGCCGCCGCCGGA CCGTCGCCGTCGCCGCCGCCTCCAGGGTCTGCGCCGCTGTGGCCGTCGCC GCCGCTCCCGGACTGGTCGTCGACATCCATTGAGGCTGAGCAGTCCCCGC CGCAACCGCACCAAGATCGGCGGACCACACAGTCGGCGACCGCACCGGGG TACGCACCTCTCACGCCCCATGCTTCGAGACTGCTAGGCGAGGGGGGAGA TCCGCGGATCCGAGGACGCACGAGAGCGGAAGCGCGCACCATCGCCCAGC AACAGCTTTCTGCCCTATCGGTGGACCGGCAGTTGCCATCACTGCAGGAA GATGCCGTCACCACGCCTTTCCCTCCGACCGAAATCACCATGGGGCTGCT GGCTCAAGCAAACGAAGACGTCCTCCTCTCCATGCTGGATGCTCGGCGAT TCATGAACGGCAAGACAATGCTCCGGCCAGGATTGGAGGAGGGCGGCGAG AAGGGGGGCCAAGGCGAGCAGCTCGCGAGGAGTGAGGGCGTGGGAGAGAG CACGGGAAAGATGCCGGAGGTGGACATCGGCGAGGAGGGACGCATGGGGA ATGGTTGGTCGATCGGTTCGTCTGAGCGGGGCGTTCCGCTCGGACTTGTG GCGCGTCTTGCGACGCGCGACGACCTCGACGCATCTGTGCGCGAGATGGA GCCGCCTCTCTTGCGACTCGACATGCCGCGCTGCCACGCCAAGGACCTCC GAGTNTTCATGAACGGCAAGACAATGCTCCGGCCAGGATTGGAGGAGGGC GGCGAGAAGGGGGGCCAAGGCGAGCAGCTCGCGAGGAGTGAGGGCGTGGG AGAGAGCACGGGAAAGATGCCGGAGGTGGACATCGGCGAGGAGGGACGCA TGGGGAATGGTTGGTCGATCGGTCCGTCTGAGCGGGGCGTTCCGCTCGGA CTTGTGGCGCGTCTTGCGACGCGCGACGACCTCGACTCAGCTGTGCGCGA GANGCCGCGCTGCCACGCCAAGGACCTCCGAGTACCCCAGACTTTCAAAG ACGCAAAGCAGTGCGAGCACAGCGAGCAGTTCATGGATGCGGTCAAGCAT AACTACATCAAGTCGAAGTTGATTTTTGATTGGAAGGTAGATGCGTTCGG CTTTCCTACGAAGGCCAAGGCTAGACTTGTTGCGAGAGGAGACATGCAGA AGGAGTGCATTGACTTTGGTGATTCGTATGCACCTACTGTAACTTCATCT AGTGTTCGTATGTTGGCAGCTTTGGCGTGTGAGCTTGACTTGGAACTGTG TCACTTCGATATCGACCAGGCTTTTGTGAGGGCCCTGCTCAAGGAAGATA TTTTCATGCGACTGCCGGAAGGATGTGGTGCGTTGTCGGGGAAGATAGTG CAGTTGAACAAGAGCCTTTATGGCTTGAGGCAGGCATCTAGAGAGTGGTA CGCGTTACTGAAGAAGTGTCTTTCGGCTTTGGGGTTCGAGCAGTGCATGA TGACTGATTCGTGTGTTTTTCGTTTAGTCGAAGGGGGGGAAGTAGTGTTG CTACTTGTAGTACACGTAGACGATATTTTTGCTGTGGGGACGAAGGCGAG GTGTGATCAATTCGGCAAGGACGTGGGAGAGTACGTGCCAGTGAAGTTTC TAGGGGAGTTGAAGTGGTACTCCGGTTGCTATTACGAGAGGGACAGAGAG GCAGGCAGGCTGACGCTTTCACAGCAGACATAG back to top
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