|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft1106_3 |
| Protein domains | SSF56672 |
| Protein domains | PTHR19446 |
| Protein domains | IPR000477 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | rna-directed dna polymerase from mobile element jockey os:drosophila funebris gn:jockey\pol pe: [Automatic annotation] |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2139 |
| Evalue | 1.18e-86 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0006259 |
| EC | 3.1 |
| GO | 0004518 |
| GO | 0016740 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1106_3a-0001 ID=EsuBft1106_3a-0001|Name=EsuBft1106_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2139bp|location=Sequence derived from alignment at Scaffold_210:32309..35753+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGGACGTGGCCGGAGTTCACCAGGCANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT AGACGTACGAGCAGCAGGGGACTGGGTGATNTTCGACTACGTCCTGGTAG ATAGGGGGAGGACAGATCCCAGAGCTGCATGGGACTGGGTGATTGAAGGG TGGGAGTCCATCGTGAACGCAACGGCAGAGAGAGTAGTGGGAAGGAAGGT GGTACGATGTGGGGTATCGGTTAAGTGGTGGGATGACGAGCTGAAAGAAG AAATAGGGGAACGTAGAGAAGTCTTCAAGCAGTACCTGAGTGAGGCGTCT GAGGAGAGTTGGGAAAAGTACAGGGCCAAGAGAAAACAGGTGAAGGGACT AGTGAGAAAGAAGAAAAAGTGTATTTGGGACCAAGTAGTGCAGAAGGCCA ACGGAGGCCTGGAGGGAAACGTCAAGCAGATGTGGGAAGGGATTAGTGGA ATGGACACTACTCGAGACTTGGAGTGCCCTCAGAAAAAGAAGCTTTTGAC CAACCAAGTGTTCAAGAAGGAGGTGGACGCATGGGCCCAGAAAGAAGAAG AGACATCGAAGGCAGACGTTGGGAACGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGAAATGGGTTGTGGAAAC AACTGTGTGTGGTCCAAATACGGGATCAAGAGGAAAATGTGGCGAGTGCT GAAGAAGACGACAGAGTGTACGAAAGGCGCGGTCATGTTAGACGGAGAAC TGTCTAAATTCTTCGACATTGAGCAGGGGGTCCCACAAGGTTGCACGCTG TCCCCAACATTGTTCCAGGTGTTCATCAACGATCTGTTGGAAGTCGTAGA GGCAGTCCGGAAGGGAGTAAAAGTAGGGGACACGGAAACGTCGGTTTCAG GAATGCTGTTTGCGGATGATTTTGTCGGTATGTCGGACACCCCTGAGGGA CTGCAACTGCAATTTGACGCGGCGACAAAGTTTACTGGTAAGTGGAGATT GTCTGCCAACGTTAAGAAGAGTGCCGTCATGGTATGCAACGAGAACAAGG AGGAACCAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTA GTGGACCAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTG GAATGCACACATGTTCAAAGTAGCGGAAAAGGGCAAAGCAAGAGCAGGGA AGCTGCACCCAATACTCGCNGTCCACACATACCTCGGAGTAGAGATCGCA AAAGACTGCTCGTGGAATGCATACATGTCCAAGAATCTAAAGGAAGAATC CAAGGATAAGGAGGGTCTAGAAGTGCAGGGAATGTTGAAGGAAGGAATAG GGTTCAAGGACTACCTACATGGACCAATGGATGCAGGAACAAAGCTTAAG GTCAAATTCAGGACCGGGGACATGGACCTCCGAGAACGCCGACGAAGACA TAGGACGGTAGACGACGAAGACGACGAGTTCAAATGTGATTGCGGCTTCG AATGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTACAAGAAG GAGAGGGAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGAACGTACAG GGAGATGTTTGAGGCATGGAATAGAGAGGAAAGGACGGTAGCTGTACTGG GGCATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGAC AGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACG ATTGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAG GACGCGTGGTCAATGGTCTAACCGCTAAGGCATGCAAAACACCTGAGTAC GTCCTCCTCCCCGGGAGGCGGGAGAAATTCGAAAAGTGA back to topprotein sequence of EsuBft1106_3a-0001 >EsuBft1106_3 ID=EsuBft1106_3|Name=EsuBft1106_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=712bp
MGTWPEFTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXVDVRAAGDWVXFDYVLVDRGRTDPRAAWDWVIEG WESIVNATAERVVGRKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEAS EESWEKYRAKRKQVKGLVRKKKKCIWDQVVQKANGGLEGNVKQMWEGISG MDTTRDLECPQKKKLLTNQVFKKEVDAWAQKEEETSKADVGNXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEMGCGN NCVWSKYGIKRKMWRVLKKTTECTKGAVMLDGELSKFFDIEQGVPQGCTL SPTLFQVFINDLLEVVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEG LQLQFDAATKFTGKWRLSANVKKSAVMVCNENKEEPVEHRWKWGIEEIAV VDQYTYLGVEIAKDCSWNAHMFKVAEKGKARAGKLHPILAVHTYLGVEIA KDCSWNAYMSKNLKEESKDKEGLEVQGMLKEGIGFKDYLHGPMDAGTKLK VKFRTGDMDLRERRRRHRTVDDEDDEFKCDCGFECEDRVHVVAECPWYKK EREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRID RLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTPEY VLLPGRREKFEK back to topmRNA from alignment at Scaffold_210:32309..35753+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1106_3a-0001 ID=EsuBft1106_3a-0001|Name=EsuBft1106_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3445bp|location=Sequence derived from alignment at Scaffold_210:32309..35753+ (Ectocarpus subulatus male Bft15b) ATGGGGACGTGGTAAGCAAACTAGGGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGG
ACAGGCGATCGGGCAGCACGGAGAAGACAAAGTGAATGACAACGGAGTGA
GGATGCTTGAATTCTTGGCAACGAACTGCCTGATGGTGTTGAACGGTAGG
AGGGAATGCGATAGGCCGGAGTTCACCAGGCANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTAAGAAACAGAGGAAAGTGTTCCGGTGGAAAGTAGAGCGTTTGGGAGA
CGAGGGGTCTGGCTGGTACTGTAGAACCCTTCAGGAAACTTCCGAGGAGC
GTCGGAGACGGACAGGTAGACGTACGAGCAGCAGGGGACTGGGTGATNTT
CGACTACGTCCTGGTAGATAGGGGGAGGACAGATCCCAGAGCTGCATGTA
AGTGCGATGGTTATAGGTTCGACCGACCACTTCCTCATATGGGCAAACAA
ACATCGACCGATCTAGAAAGATGGAAAGTAAGAAGCAGAGGAAAGTGTTC
CGGTGGAAAGTAGAGCGTTTGGGAGACGAGGGGACTGGCTGGTAGTGTAG
AACCCTTCAGGAAACTTCCGAGAAGCGTCGGAGACGGACAGGTAGACGTA
CGAGCAGCAGGGGACTGGGTGATTGAAGGGTGGGAGTCCATCGTGAACGC
AACGGCAGAGAGAGTAGTGGGAAGGAAGGTGGTACGATGTGGGGTATCGG
TTAAGTGGTGGGATGACGAGCTGAAAGAAGAAATAGGGGAACGTAGAGAA
GTCTTCAAGCAGTACCTGAGTGAGGCGTCTGAGGAGAGTTGGGAAAAGTA
CAGGGCCAAGAGAAAACAGGTGAAGGGACTAGTGAGAAAGAAGAAAAAGT
GTATTTGGGACCAAGTAGTGCAGAAGGCCAACGGAGGCCTGGAGGGAAAC
GTCAAGCAGATGTGGGAAGGGATTAGTGGAATGGTAAAAAAGACCGCGTA
AGGGGTAGCAACTTTGCGAGGTGTGAACGGTGGATTGGTCAGCAATGGGA
AGGGAAAGAGGGGAGTTCTAGCAGGACACTACTCGAGACTTGGAGTGCCC
TCAGAAAAAGAAGCTTTTGACCAACCAAGTGTTCAAGAAGGAGGTGGACG
CATGGGCCCAGAAAGAAGAAGAGACATCGAAGGCAGACGTTGGGAACGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GGAGAAATGGGTTGTGGAAACAACTGTGTGTGGTCCAAATACGGGATCAA
GAGGAAAATGTGGCGAGTGCTGAAGAAGACGACAGAGTGTACGAAAGGCG
CGGTCATGTTAGACGGAGAACTGTCTAAATTCTTCGACATTGAGCAGGGG
GTCCCACAAGGTTGCACGCTGTCCCCAACATTGTTCCAGGTGTTCATCAA
CGATCTGTTGGAAGTCGTAGAGGCAGTCCGGAAGGGAGTAAAAGTAGGGG
ACACGGAAACGTCGGTTTCAGGAATGCTGTTTGCGGATGATTTTGTCGGT
ATGTCGGACACCCCTGAGGGACTGCAACTGCAATTTGACGCGGCGACAAA
GTTTACTGGTAAGTGGAGATTGTCTGCCAACGTTAAGAAGAGTGCCGTCA
TGGTATGCAACGAGAACAAGGAGGAACCAGTAGAACATAGATGGAAGTGG
GGGATCGAGGAGATTGCAGTAGTGGACCAGTACACATACCTCGGAGTAGA
GATCGCAAAAGACTGCTCGTGGAATGCACACATGTTCAAAGTAGCGGAAA
AGGGCAAAGCAAGAGCAGGGAAGCTGCACCCAATACTCGCNGTCCACACA
TACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTGGAATGCATACATGTC
CAAGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGCGCACAAGTAATGCAGTCACCAGGGC
AGAATTGGGGATCCAATCCCTACGGTCGGGAAGAGACGCGAGGAAGCTGA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGC
TCGACATCGACGAAGATCAATGAAACGCTGGAAAAGGATGGTCTACAGGG
TTCAAGGAGATATCTGTTGCTTGTGCCGAGAGAGAACAGAATCTAAAGGA
AGAATCCAAGGATAAGGAGGGTCTAGAAGTGCAGGGAATGTTGAAGGAAG
GAATAGGGTTCAAGGACTACCTACATGGACCAATGGATGCAGGAACAAAG
CTTAAGGTCAAATTCAGGACCGGGGACATGGACCTCCGAGAACGCCGACG
AAGACATAGGACGGTAGACGACGAAGACGACGAGTTCAAATGTGATTGCG
GCTTCGAATGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTAC
AAGAAGGAGAGGGAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGAAC
GTACAGGGAGATGTTTGAGGCATGGAATAGAGAGGAAAGGACGGTAGCTG
TACTGGGGCATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCGTTAGG
ATAGACAGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAA
GGAACGATTGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCT
CTCGAGGACGCGTGGTCAATGGTCTAACCGCTAAGGCATGCAAAACACCT
GAGTACGTCCTCCTCCCCGGGAGGCGGGAGAAATTCGAAAAGTGA back to topCoding sequence (CDS) from alignment at Scaffold_210:32309..35753+ >EsuBft1106_3a-0001 ID=EsuBft1106_3a-0001|Name=EsuBft1106_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2139bp|location=Sequence derived from alignment at Scaffold_210:32309..35753+ (Ectocarpus subulatus male Bft15b) ATGGGGACGTGGCCGGAGTTCACCAGGCANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT AGACGTACGAGCAGCAGGGGACTGGGTGATNTTCGACTACGTCCTGGTAG ATAGGGGGAGGACAGATCCCAGAGCTGCATGGGACTGGGTGATTGAAGGG TGGGAGTCCATCGTGAACGCAACGGCAGAGAGAGTAGTGGGAAGGAAGGT GGTACGATGTGGGGTATCGGTTAAGTGGTGGGATGACGAGCTGAAAGAAG AAATAGGGGAACGTAGAGAAGTCTTCAAGCAGTACCTGAGTGAGGCGTCT GAGGAGAGTTGGGAAAAGTACAGGGCCAAGAGAAAACAGGTGAAGGGACT AGTGAGAAAGAAGAAAAAGTGTATTTGGGACCAAGTAGTGCAGAAGGCCA ACGGAGGCCTGGAGGGAAACGTCAAGCAGATGTGGGAAGGGATTAGTGGA ATGGACACTACTCGAGACTTGGAGTGCCCTCAGAAAAAGAAGCTTTTGAC CAACCAAGTGTTCAAGAAGGAGGTGGACGCATGGGCCCAGAAAGAAGAAG AGACATCGAAGGCAGACGTTGGGAACGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGAAATGGGTTGTGGAAAC AACTGTGTGTGGTCCAAATACGGGATCAAGAGGAAAATGTGGCGAGTGCT GAAGAAGACGACAGAGTGTACGAAAGGCGCGGTCATGTTAGACGGAGAAC TGTCTAAATTCTTCGACATTGAGCAGGGGGTCCCACAAGGTTGCACGCTG TCCCCAACATTGTTCCAGGTGTTCATCAACGATCTGTTGGAAGTCGTAGA GGCAGTCCGGAAGGGAGTAAAAGTAGGGGACACGGAAACGTCGGTTTCAG GAATGCTGTTTGCGGATGATTTTGTCGGTATGTCGGACACCCCTGAGGGA CTGCAACTGCAATTTGACGCGGCGACAAAGTTTACTGGTAAGTGGAGATT GTCTGCCAACGTTAAGAAGAGTGCCGTCATGGTATGCAACGAGAACAAGG AGGAACCAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTA GTGGACCAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTG GAATGCACACATGTTCAAAGTAGCGGAAAAGGGCAAAGCAAGAGCAGGGA AGCTGCACCCAATACTCGCNGTCCACACATACCTCGGAGTAGAGATCGCA AAAGACTGCTCGTGGAATGCATACATGTCCAAGAATCTAAAGGAAGAATC CAAGGATAAGGAGGGTCTAGAAGTGCAGGGAATGTTGAAGGAAGGAATAG GGTTCAAGGACTACCTACATGGACCAATGGATGCAGGAACAAAGCTTAAG GTCAAATTCAGGACCGGGGACATGGACCTCCGAGAACGCCGACGAAGACA TAGGACGGTAGACGACGAAGACGACGAGTTCAAATGTGATTGCGGCTTCG AATGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTACAAGAAG GAGAGGGAAGTGTACGTGACTGAGCTGGGAAAAATAGATGGAACGTACAG GGAGATGTTTGAGGCATGGAATAGAGAGGAAAGGACGGTAGCTGTACTGG GGCATAGGAGGTGGGTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGAC AGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGAAAGGAACG ATTGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAG GACGCGTGGTCAATGGTCTAACCGCTAAGGCATGCAAAACACCTGAGTAC GTCCTCCTCCCCGGGAGGCGGGAGAAATTCGAAAAGTGA back to top
|