EsuBft1105_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1105_5a-0001
Unique NameEsuBft1105_5a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_618contigScaffold_618:701652..707475 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LRB2
ProteomeIdEsuBft1105_5
Protein domainsIPR017904
Protein domainsSSF55753
Protein domainsPTHR11913
Protein domainsIPR029006
Protein domainsIPR002108
Ownerapollo_admin@sb-roscoff.fr
Noteactin-depolymerizing factor 7 os:arabidopsis thaliana gn:adf7 pe:2 sv:1 [Automatic annotation]
Nb exon4
Max annot lvl2759|Eukaryota
Length3540
Hectar predicted targeting categoryother localisation
Evalue1.96e-257
EggNOG OGsKOG1735@1|root,KOG1735@2759|Eukaryota
Ec32 ortholog descriptionActin-depolymerising factor homology domain
Ec32 orthologEc-06_003170.1
Date last modified2016-06-13
Date creation2016-06-13
Preferred nameCFL2
KEGG koko:K05765,ko:K10363
KEGG Pathwayko04360,ko04666,ko04810,ko05133,map04360,map04666,map04810,map05133
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000302,GO:0000902,GO:0000904,GO:0000910,GO:0001101,GO:0001558,GO:0001667,GO:0001755,GO:0001838,GO:0001841,GO:0001842,GO:0001952,GO:0001954,GO:0002009,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003006,GO:0003674,GO:0003779,GO:0005102,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005829,GO:0005856,GO:0005865,GO:0005884,GO:0005886,GO:0005911,GO:0005938,GO:0006464,GO:0006468,GO:0006606,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006950,GO:0006952,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007166,GO:0007264,GO:0007265,GO:0007266,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007517,GO:0007519,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008289,GO:0008360,GO:0008361,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009826,GO:0009856,GO:0009860,GO:0009870,GO:0009888,GO:0009893,GO:0009932,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010469,GO:0010591,GO:0010592,GO:0010593,GO:0010604,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010720,GO:0010769,GO:0010810,GO:0010811,GO:0010927,GO:0010941,GO:0010975,GO:0010976,GO:0014020,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014706,GO:0014823,GO:0014866,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016049,GO:0016310,GO:0016331,GO:0016363,GO:0016477,GO:0017038,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019902,GO:0019903,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021915,GO:0022008,GO:0022402,GO:0022411,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0030010,GO:0030016,GO:0030017,GO:0030018,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030042,GO:0030043,GO:0030054,GO:0030154,GO:0030155,GO:0030162,GO:0030175,GO:0030239,GO:0030240,GO:0030307,GO:0030308,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030496,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030836,GO:0030838,GO:0030863,GO:0030864,GO:0030900,GO:0031002,GO:0031032,GO:0031090,GO:0031252,GO:0031323,GO:0031325,GO:0031334,GO:0031344,GO:0031345,GO:0031346,GO:0031347,GO:0031349,GO:0031674,GO:0031915,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032231,GO:0032232,GO:0032268,GO:0032270,GO:0032271,GO:0032273,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032432,GO:0032501,GO:0032502,GO:0032535,GO:0032870,GO:0032878,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0032984,GO:0032989,GO:0033036,GO:0033043,GO:0033267,GO:0033365,GO:0033554,GO:0034097,GO:0034399,GO:0034504,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034622,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035091,GO:0035148,GO:0035239,GO:0035295,GO:0035556,GO:0035690,GO:0035722,GO:0035821,GO:0036211,GO:0036379,GO:0036477,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042221,GO:0042493,GO:0042542,GO:0042592,GO:0042692,GO:0042742,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043197,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043242,GO:0043243,GO:0043244,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043412,GO:0043434,GO:0043624,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044309,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044706,GO:0044788,GO:0044794,GO:0044877,GO:0045088,GO:0045089,GO:0045184,GO:0045202,GO:0045214,GO:0045472,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045785,GO:0045792,GO:0045862,GO:0045926,GO:0045927,GO:0046677,GO:0046686,GO:0046716,GO:0046907,GO:0048046,GO:0048167,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048598,GO:0048638,GO:0048640,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048762,GO:0048814,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0048870,GO:0050767,GO:0050769,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050807,GO:0050896,GO:0051014,GO:0051015,GO:0051017,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051146,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051258,GO:0051261,GO:0051270,GO:0051271,GO:0051272,GO:0051301,GO:0051493,GO:0051494,GO:0051495,GO:0051510,GO:0051511,GO:0051641,GO:0051649,GO:0051674,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051893,GO:0051894,GO:0051960,GO:0051962,GO:0055001,GO:0055002,GO:0055044,GO:0060249,GO:0060255,GO:0060284,GO:0060322,GO:0060341,GO:0060429,GO:0060485,GO:0060491,GO:0060537,GO:0060538,GO:0060548,GO:0060560,GO:0060562,GO:0060571,GO:0060998,GO:0060999,GO:0061001,GO:0061061,GO:0061572,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070301,GO:0070555,GO:0070671,GO:0070727,GO:0070741,GO:0070848,GO:0070849,GO:0070887,GO:0070925,GO:0071236,GO:0071310,GO:0071345,GO:0071347,GO:0071349,GO:0071354,GO:0071356,GO:0071362,GO:0071363,GO:0071364,GO:0071375,GO:0071417,GO:0071495,GO:0071689,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072175,GO:0072594,GO:0080090,GO:0080134,GO:0090066,GO:0090109,GO:0090732,GO:0097060,GO:0097237,GO:0097435,GO:0097447,GO:0097458,GO:0098542,GO:0098590,GO:0098794,GO:0098858,GO:0099080,GO:0099081,GO:0099175,GO:0099177,GO:0099512,GO:0099513,GO:0099568,GO:0099601,GO:0110053,GO:0120025,GO:0120032,GO:0120033,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1900006,GO:1900449,GO:1900451,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901879,GO:1901880,GO:1901881,GO:1901888,GO:1901890,GO:1901981,GO:1902743,GO:1902744,GO:1902745,GO:1902903,GO:1902904,GO:1902905,GO:1902936,GO:1902950,GO:1902951,GO:1903047,GO:1903391,GO:1903393,GO:1903827,GO:1903829,GO:1904062,GO:1904064,GO:1904783,GO:1905809,GO:1905871,GO:1905873,GO:1905874,GO:1905875,GO:1990314,GO:2000026,GO:2000114,GO:2000145,GO:2000146,GO:2000147,GO:2000273,GO:2000310,GO:2000769,GO:2000771,GO:2000782,GO:2000784,GO:2000812,GO:2000814,GO:2001257,GO:2001259
Descriptionactin filament depolymerization
COG categoryO
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Cross References
External references for this mRNA
DatabaseAccession
GO0003779
GO0015629
GO0030042
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1105_5aEsuBft1105_5aEctocarpus subulatus male Bft15bgeneScaffold_618 701652..707475 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1105_5a-0001EsuBft1105_5Ectocarpus subulatus male Bft15bpolypeptideScaffold_618 703355..707041 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1105_5a-0001-exonEsuBft1105_5a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_618 701652..703495 -
EsuBft1105_5a-0001-exonagat-exon-20531Ectocarpus subulatus male Bft15bexonScaffold_618 704123..705277 -
EsuBft1105_5a-0001-exonagat-exon-20532Ectocarpus subulatus male Bft15bexonScaffold_618 706260..706472 -
EsuBft1105_5a-0001-exonagat-exon-20530Ectocarpus subulatus male Bft15bexonScaffold_618 706880..707162 -
EsuBft1105_5a-0001-exonagat-exon-20534Ectocarpus subulatus male Bft15bexonScaffold_618 707218..707240 -
EsuBft1105_5a-0001-exonagat-exon-20533Ectocarpus subulatus male Bft15bexonScaffold_618 707454..707475 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1105_5a-0001-exonagat-three_prime_utr-1004Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_618 701652..703354 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1105_5a-0001-cdsEsuBft1105_5a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_618 703355..703495 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1105_5a-0001-exonagat-five_prime_utr-634Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_618 707042..707162 -
EsuBft1105_5a-0001-exonagat-five_prime_utr-635Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_618 707218..707240 -
EsuBft1105_5a-0001-exonagat-five_prime_utr-636Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_618 707454..707475 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1105_5a-0001 ID=EsuBft1105_5a-0001|Name=EsuBft1105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3540bp|location=Sequence derived from alignment at Scaffold_618:701652..707475- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGGAGCCGCCGCCGACGAAACAGGCACGAGAATCGCGCCCGGCAATAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCGGTGGC
AGTAGCCTGAGAGGAGGGGAGAACTGGCGCTCACGACCGAACTCCCCCGG
CGTCGTGAGAACGGGAATGGAAGAGGCCGACGCTCGCCTGCAGGAAGTCG
TCGCTTCGCTGCTCAACGAGCACGGGGGTAGCCACGAGCAGGCGCTCCGG
CAGACGTTCGCGTGCCTGCACAACTCTGGGCTGTACGAGGCGCAGTCTGC
CGCTGAGGAGGAGCAGAGGGAGCAGCAGGTGCTAGCGGTCTTCCGCTCGT
TTCCGTTCCGAACCCCGGCCGCCCCCGAGGGCAACGGTGCCGGGAGCCTC
GTGGAGGAGACCCAGGCGCAGCCGCCGCCGCCGCCGGCTTATAACAACGC
CCTCGCACGGGAGCCTGAAGAGGCGGGCGAGGTGACACCGGCCCAGGTGG
ACCCGGAAAACGTTGGGGAGGACGCTGGAGCTCAGCCAGCCCCCGAGGCT
TTGTTGCCGCTGAATCCGGTCGAGCCCCAACCGGCAGACCAGCAGCCATC
TCCGGCGCCTCCAGGTCCGGAGGTGAGTCACCAGGGAGCTGCCCCGCCGT
CCAACCTCCCACCGCATCAGCCACCTGCTGGAGAGGACGCGGCACCGCCA
CGAGGCTCGGCTACTCCCGAGAGTTTCGCGTCTGCGGCACTGGATACTGG
AGACGCAGTTGTCGCAGCGGCAGCGGCAGCGGCGGCCGCGGCGGCGGCCG
GGGGAGGCGTTGAGGAGACGAAGGGCGAAGAGAGGGGCGAGGGGATAGTA
TATCCCGAGACTGGGGAAGCGGAGGAGGGGTTGCCGGTCACCATAGAGGA
AGGCGCGGTGGGGGCATCAACGGAAGAATCGGGGTCACAGCTGGAAGCGG
GGGGGCAACAAGAAGTGACAGGAAACGGAGCGGCGGGAGCGCACGGCGAG
AGCACTTACGGCTGTAACGGCACCGCGGCGTCCGAATCCAGCAAAGGGGT
AGTGTACAGCGACCCGGAGAGCACCCGGCAGGAAGGGAGCACGGCATCAC
AACAGCAGGAACCACCACCTCCACGAGAACAGGAGGCGGCGCGAACCCCT
CAGGTTAACGGAAGTGCTCCCACCGCCACCGCCGCGGCCGCCGCCGCCGC
TGTGGGTGAAGCAGCCGGAGGAGAGAGAAATATGGACGCTCCCGCGCGCC
CCGCGGACGCTGGCGATGGTGGTGCTGCCGCTTCAGCGACCGTTCCAGCT
CCCGCCGCCGGTACCGCCGGCGCCGCCGCGGCCGTGTCTGCGCCGACGAC
GACAGCGGTAACAGAGCCACACCTCAAGACCGCTGGGCAGCCCTTGACCC
ACGCGAACCGCGCGGAGTCCCCGACGGGGATGTCGACCGACCTCCAGGAC
AAGCTCAAGGCGCTCAAGTTGCGCCGCAAGCACCGGTTCGTCACCATGCG
AATCGAGGGGACGGAGGTGGTGGCGGAGACGGTGGCGGCGCCCGCGGAGG
GCCCGGCGGAGCTAAAGGCGGCGCTGCCGTACAGCGACTGCCGGTACGCG
GTCTACGACCAGGCGATCGTTACCGTGGATGGCCGCAAGGCCAACAAGCT
CTTCTTTTTCACGTGGGTTCCGCACAACGCGACGCCCCACAACAAGATGG
CGTACTCTCACGGGAAGGTGACGGTGAGGCAACGCCTGGAGGGTTTGTAC
GATGTGGCGGCCAGCAGCTTCGGGGACGTGGAGGTGGCGCTGGGGTTGGT
CGACGAGGACGAGGAAGACTCAGACATCGACTTTTGAAGTAAATCTCTAG
ACACGATTCGGGGTATTGGTTCGGGGTATTTGGCTAATGGCGGCGTTCGA
GTTAGTTGTGCTCTTTCCTAGGGTACGTTTGTGTTTTGGTTTGACTTGTA
GCTTGGGCTTTAACTAACAAACTGCGCTGCAGGGTGTGGGTCGCCAACGA
CGAGTGTTTAACTATAACGGTGTGTCATGACTCTTTCCCACAGCTGCCTA
GTTTTTGTCTTTGTTTTTTTTGTGCTTCAGGAGCCCCACTGGCGAGTCTT
CCCGTGGAACGGGGTTGAGGCGGGCTGTGTTGATTGTTGCATTAGGTCTG
TATGACCGAACACGATTTGTCCTTCCAGCGTTCGTTCGATATTCGTGACT
CGTTACGTTGTGTTCCGCCCACCCACACCCTCATGTCATCCCCTTCCGTG
TATCTGTATGGGCGGGATCGCTGGATTCTCACCTCGACGCATAAAATAAT
CATTGATTGAGTAGCTGCGATTCTATGAGCTGGCATTCAATCAGCTTCCC
TCTGCTGAGTCCATTCGTTGCTGTGGGTGGATTCTAGTCCGCGGGACAAG
TTTCGGTAGTGTTCCTTCTCCTAGCATGCCTCTGTCAGACACTGAGAATG
AACTCGTGTGTTTTCGCGAGATTTTGCTGATCTGCCGGTTCCTCCGTGCG
ATGTGCTTCGCCCGGCGCACTCCCCATTTTCGGCGACCAAACGTTGTTTC
CTTGTACGCAATTTTGCATACAACCGATGCTTCGTGCTGTTTTCGCAGCG
CGCCAATTCCGCACAAGCCAGCGATTCCAGAGCTTGGATCACAAACAAGC
CTTCTTCGGGCGTGACTCAAGACTTGCATGTTTTGGTCTTGTGTGTGTTT
TTGTGTTCGTGTGGTTCAAGCACGCGCGCACGTGCTGGGTGAAAACGAAG
AAGTTCCGGCATCCTGGCTTGCCCGCCCCTCATTTGAGTTTGTATTTTTT
GTTGCTGGCGTGTCGTTTTGCGGCGCAGCAAGCTGGTAGGATTCCCCCGT
GTATCCTCAACACCCTTCGATGGATGTTCAAGATCGTAGATTCAAATCCA
GGTAGGACCTTGTGCAGACGTTGCTCGTTCGTCAAGTAGATGAACTCGTT
TTGTGATTGTCGATTGAAATAGGGTTACGAACGCTTACCTTCTAGCGATA
ATGCTGCCCGTCCGTTTGGCCCCGGGTTGTAGCTGTTCGGCAGAGAAGGC
CGTCGGTAATGTAGCAGGTGCTGCGAGCGGCCACACGTTGTAGGCATGTC
GGGATAACCGCAAAACGTAGTTCAATTAAGGGGCTGCAATCAAGACAATG
CGAGACCCTCCCTTCCTCCTTGGCTCCAAAAATTCGGTCGAGGAAAAAGC
TTGCTGACGGAGTCCCGGGGGACTCCTTCCAGATAGATACGTGTAGCAAG
TGGGATCGAGACGAGAGAAGATGTCGTCGGTTTTACATATCTGGACAACC
AAAGCCGCGCTGTCATCTTTTCAAGGGAAGCCAATCTCTCCTACACTGTA
CTTTGTTAGACTAGACCAAGGACCGGGAAAGTTTTTTTTTATGTGAGGTT
GTGAAGGTGACTCTGTCCGGTTTCAGGAATTTGAGGGGACCGGTTGGCAT
TCTTTTTTTGAGGTTGCTGCACGACCGGTTTCTCTTTTGCTTTTGGTGGC
ATAAACGTTTCCTTTGCCCCGCGGGCTAACTTGTAAGTTG
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protein sequence of EsuBft1105_5a-0001

>EsuBft1105_5 ID=EsuBft1105_5|Name=EsuBft1105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=556bp
MEEADARLQEVVASLLNEHGGSHEQALRQTFACLHNSGLYEAQSAAEEEQ
REQQVLAVFRSFPFRTPAAPEGNGAGSLVEETQAQPPPPPAYNNALAREP
EEAGEVTPAQVDPENVGEDAGAQPAPEALLPLNPVEPQPADQQPSPAPPG
PEVSHQGAAPPSNLPPHQPPAGEDAAPPRGSATPESFASAALDTGDAVVA
AAAAAAAAAAAGGGVEETKGEERGEGIVYPETGEAEEGLPVTIEEGAVGA
STEESGSQLEAGGQQEVTGNGAAGAHGESTYGCNGTAASESSKGVVYSDP
ESTRQEGSTASQQQEPPPPREQEAARTPQVNGSAPTATAAAAAAAVGEAA
GGERNMDAPARPADAGDGGAAASATVPAPAAGTAGAAAAVSAPTTTAVTE
PHLKTAGQPLTHANRAESPTGMSTDLQDKLKALKLRRKHRFVTMRIEGTE
VVAETVAAPAEGPAELKAALPYSDCRYAVYDQAIVTVDGRKANKLFFFTW
VPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVEVALGLVDEDEE
DSDIDF
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mRNA from alignment at Scaffold_618:701652..707475-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1105_5a-0001 ID=EsuBft1105_5a-0001|Name=EsuBft1105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5824bp|location=Sequence derived from alignment at Scaffold_618:701652..707475- (Ectocarpus subulatus male Bft15b)
TGGAGCCGCCGCCGACGAAACAGTCACTTTCCTTTGCATGCAAATAGACC
GGTTGTACCCCGATTCCCTCTCTCGAGAGCTGAGGGAACGATAGGGTGTC
ATCGTGTCATGTGCCAAGAACGTGGCGGTACATGCCCCATGAAACATGTT
GTCGTTTTTTGTTGGTCGCTTGCCGCTCGCTGGCCAACAGGTTGTTTTCC
GCGCAGAACGCACTCAGGCAGTCAGCGCCATCCAGGGCACGAGAATCGCG
CCCGGCAAGTAAGTAGTACTGCTTCGACAGGCGGGGTACCGCACCCAGCA
GTAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGT
AGCAGCAGCAGCGGTGGCAGTAGCCTGAGAGGAGGGGAGAACTGGCGCTC
ACGACCGAACTCCCCCGGCGTCGTGAGAACGGGAATGGAAGAGGCCGACG
CTCGCCTGCAGGAAGTCGTCGCTTCGCTGCTCAACGAGCACGGGGGTAGC
CACGAGCAGGCGCTCCGGCAGACGTTCGCGTGCCTGCACAACTCTGGGCT
GTACGAGGCGCAGTCTGCCGCTGAGGAGGAGCAGAGGGAGCAGCAGGTCC
GTCCGTTCCTTCTTTTTTTTCGTTCACCGTGAATGCTTCCAAATAGTTGG
ATTGTTAGGCGTTTATCCGGTCGGCGAGCCCGGTCGCCAAGGAAGGCCAC
AGGCCGGGCTGAAGCCCGGGGGCGTCGCTGCCCCGCCGCCTAAGAACAAC
ACCAAGGCCGTGAATTCCTGCCGTACGCCGCAGTGGTGTGTTCTCAGCAG
GACACACATCCGCGTAGCCCCGGGCTGCTGGTCGTACGTACCTGCGGGCA
TTTATCCTTTCTTTTCATACGGAGTAAGTTCCCATTGTGGCCTGCTGCTA
TCGTCCGTCTGTGCCTGTGTTGTATTCGCCGACTAGAAGTTTTTTTTTCT
GTTCCTCGTGCTCGCTGCAATCGACGACGCACCCCACCGCCGGCGCGTTC
CAGGTGCTAGCGGTCTTCCGCTCGTTTCCGTTCCGAACCCCGGCCGCCCC
CGAGGGCAACGGTGCCGGGAGCCTCGTGGAGGAGACCCAGGCGCAGCCGC
CGCCGCCGCCGGCTTATAACAACGCCCTCGCACGGGAGCCTGAAGAGGCG
GGCGAGGTGACACCGGCCCAGGTGGACCCGGAAAACGTTGGGGAGGACGC
TGGAGCTCAGCCAGCCGTAAGTCGACTTTCGTCAGAGGAGAAGAAGAGAG
CGGCGGGGGGTTGCCGATCGTTTCAGCAACGACACCCTTTGACGCTGCTG
TGGAGAGTATGCGTTTCACGTGTCGGACGGGTGCCATTGCGCTTACCCTC
TGTCCTGGCTACTAAATAAGAACGTTGGGGTACATTATGCACAGCGGTAA
ATACCGAGCAGACACAGGCACCGGTAGGCCGCCTGGGATCATCGAGTCCG
TAGGCAATGCACAGCGCAACGCTTCGGATTGAGTCCCCACGCCGCTATGG
CAGGAAAGGAAGTACAACTTGCGTGCAAGCGATGCAGAGCTCCACTAGTA
CAGGAACATGGCGAGGGCAGATCGATGACCTGCCGGGGCTGAACGATGCA
TTCAGGGCCAACGCCCTCGCCATGCTTCCTGCAGCGTTAGTGGAGCTCTG
CAACGACTGCACGGAGCTCGCGCAGGTTTCAACAACCAACTCGGAGCTCG
CGTTATACTCCCTTTGCTGCCGTGGCGACACGGGGACTCTGTATGCTAGA
CCGTAGCGCTTTGCTTTGCCTGCGCACTCGTTGATCCTTGGTGGCATACC
GGCGCGGCCGGCTAGGTATTGGCCGCTGTCTGCATGCCCCAAGTGCAGGG
TTTCCTCTTGGCTAGGGCAGAGGGTACGCCCAAGCTCCTCCTTGTGTTAC
CCGCTCGGTACTTTGGTTGGGTTGCAGCTTGCGGCAGGCGTTCGGGCGCG
TTCTTGCCGTTTCGGCGGCGGCAACTTTGGAACATTGCAATGTAGATAAC
CTACCGTGGTTTCCGATTCTTTTTTGCGGACGCACTTCTCTTTGCATCTT
GTATCCTTGTGGTGGAAGCTGCTACTGTGTACGGTGCTCTGTCCCCTCCC
CCCGCCGCTGCTGGTTCTCTTGTGTCTCGGCTGAGGGTCGTCTTTTGATG
TCTGCTGTCCGCCCGCCCACCTTGAATCGAACGGCCTCCTCGTCGCAGCC
CGAGGCTTTGTTGCCGCTGAATCCGGTCGAGCCCCAACCGGCAGACCAGC
AGCCATCTCCGGCGCCTCCAGGTCCGGAGGTGAGTCACCAGGGAGCTGCC
CCGCCGTCCAACCTCCCACCGCATCAGCCACCTGCTGGAGAGGACGCGGC
ACCGCCACGAGGCTCGGCTACTCCCGAGAGTTTCGCGTCTGCGGCACTGG
ATACTGGAGACGCAGTTGTCGCAGCGGCAGCGGCAGCGGCGGCCGCGGCG
GCGGCCGGGGGAGGCGTTGAGGAGACGAAGGGCGAAGAGAGGGGCGAGGG
GATAGTATATCCCGAGACTGGGGAAGCGGAGGAGGGGTTGCCGGTCACCA
TAGAGGAAGGCGCGGTGGGGGCATCAACGGAAGAATCGGGGTCACAGCTG
GAAGCGGGGGGGCAACAAGAAGTGACAGGAAACGGAGCGGCGGGAGCGCA
CGGCGAGAGCACTTACGGCTGTAACGGCACCGCGGCGTCCGAATCCAGCA
AAGGGGTAGTGTACAGCGACCCGGAGAGCACCCGGCAGGAAGGGAGCACG
GCATCACAACAGCAGGAACCACCACCTCCACGAGAACAGGAGGCGGCGCG
AACCCCTCAGGTTAACGGAAGTGCTCCCACCGCCACCGCCGCGGCCGCCG
CCGCCGCTGTGGGTGAAGCAGCCGGAGGAGAGAGAAATATGGACGCTCCC
GCGCGCCCCGCGGACGCTGGCGATGGTGGTGCTGCCGCTTCAGCGACCGT
TCCAGCTCCCGCCGCCGGTACCGCCGGCGCCGCCGCGGCCGTGTCTGCGC
CGACGACGACAGCGGTAACAGAGCCACACCTCAAGACCGCTGGGCAGCCC
TTGACCCACGCGAACCGCGCGGAGTCCCCGACGGGGATGTCGACCGACCT
CCAGGACAAGCTCAAGGCGCTCAAGTTGCGCCGCAAGCACCGGTTCGTCA
CCATGCGAATCGAGGGGACGGAGGTGGTGGCGGAGACGGTGGCGGCGCCC
GCGGAGGGCCCGGCGGAGCTAAAGGCGGCGCTGCCGTACAGCGACTGCCG
GTACGCGGTCTACGACCAGGCGATCGTTACCGTGGATGGCCGCAAGGCCA
ACAAGCTCTTCTTTTTCACGTGGGTTCCGCACAACGCGACGCCCCACAAC
AAGGTATATACTGCGTGTCTCGTCCTTTTCTTGTGAAGAACGTCGGCGTT
GACGTGTTCGATCCAGCGACGGGGGGGGAGGGGTTGAAGCAAGCCAGAAT
AATCGTGTATGCAATAGTCGGTTTGTGCTGCAGTGTTCTGGCCTGTGGCC
GCTCGTTCAACGATAGATTTGGTGTGTTTCATCAGTGTGGAGGGGGATGG
CAACCGTTGGGCGCTGTGGTCAGCTTTTCCCAAGTCCAACGTTGTCTACA
CCCCAACGTTAGTGTGGCCCACACCCCCCCCTAGACCCATCGTGTTGCGT
CTCTTGCGGATAACCCATGTCTACTGGGCCGTTCAACTCCGATGAAGCCG
AAAGTCCCCGACGAATGCGCTTCCTCCTGACAACCATTCTACACGCGGTC
TTGACCGGAAGCACCGCACCACTGCTCCAATTCAGAGGCGCATTTTCCAC
GACTTGACTTTCTTCGTTCACCTGATTCATCGGCGATAGGGGCCGTGTCC
CTCGCGTCTGTCGGTGGTTCCTGTGTTCGCGATAGATTGGTGCTGCATTG
CCATCAGTTATTTTGTTGTCATCTGAACACCGACCACTAAGCATGGATGC
ACACTTTTTTATTCTCTTGTCGGCACACAGATGGCGTACTCTCACGGGAA
GGTGACGGTGAGGCAACGCCTGGAGGGTTTGTACGATGTGGCGGCCAGCA
GCTTCGGGGACGTGGAGGTGGCGCTGGGGTTGGTCGACGAGGACGAGGAA
GACTCAGACATCGACTTTTGAAGTAAATCTCTAGACACGATTCGGGGTAT
TGGTTCGGGGTATTTGGCTAATGGCGGCGTTCGAGTTAGTTGTGCTCTTT
CCTAGGGTACGTTTGTGTTTTGGTTTGACTTGTAGCTTGGGCTTTAACTA
ACAAACTGCGCTGCAGGGTGTGGGTCGCCAACGACGAGTGTTTAACTATA
ACGGTGTGTCATGACTCTTTCCCACAGCTGCCTAGTTTTTGTCTTTGTTT
TTTTTGTGCTTCAGGAGCCCCACTGGCGAGTCTTCCCGTGGAACGGGGTT
GAGGCGGGCTGTGTTGATTGTTGCATTAGGTCTGTATGACCGAACACGAT
TTGTCCTTCCAGCGTTCGTTCGATATTCGTGACTCGTTACGTTGTGTTCC
GCCCACCCACACCCTCATGTCATCCCCTTCCGTGTATCTGTATGGGCGGG
ATCGCTGGATTCTCACCTCGACGCATAAAATAATCATTGATTGAGTAGCT
GCGATTCTATGAGCTGGCATTCAATCAGCTTCCCTCTGCTGAGTCCATTC
GTTGCTGTGGGTGGATTCTAGTCCGCGGGACAAGTTTCGGTAGTGTTCCT
TCTCCTAGCATGCCTCTGTCAGACACTGAGAATGAACTCGTGTGTTTTCG
CGAGATTTTGCTGATCTGCCGGTTCCTCCGTGCGATGTGCTTCGCCCGGC
GCACTCCCCATTTTCGGCGACCAAACGTTGTTTCCTTGTACGCAATTTTG
CATACAACCGATGCTTCGTGCTGTTTTCGCAGCGCGCCAATTCCGCACAA
GCCAGCGATTCCAGAGCTTGGATCACAAACAAGCCTTCTTCGGGCGTGAC
TCAAGACTTGCATGTTTTGGTCTTGTGTGTGTTTTTGTGTTCGTGTGGTT
CAAGCACGCGCGCACGTGCTGGGTGAAAACGAAGAAGTTCCGGCATCCTG
GCTTGCCCGCCCCTCATTTGAGTTTGTATTTTTTGTTGCTGGCGTGTCGT
TTTGCGGCGCAGCAAGCTGGTAGGATTCCCCCGTGTATCCTCAACACCCT
TCGATGGATGTTCAAGATCGTAGATTCAAATCCAGGTAGGACCTTGTGCA
GACGTTGCTCGTTCGTCAAGTAGATGAACTCGTTTTGTGATTGTCGATTG
AAATAGGGTTACGAACGCTTACCTTCTAGCGATAATGCTGCCCGTCCGTT
TGGCCCCGGGTTGTAGCTGTTCGGCAGAGAAGGCCGTCGGTAATGTAGCA
GGTGCTGCGAGCGGCCACACGTTGTAGGCATGTCGGGATAACCGCAAAAC
GTAGTTCAATTAAGGGGCTGCAATCAAGACAATGCGAGACCCTCCCTTCC
TCCTTGGCTCCAAAAATTCGGTCGAGGAAAAAGCTTGCTGACGGAGTCCC
GGGGGACTCCTTCCAGATAGATACGTGTAGCAAGTGGGATCGAGACGAGA
GAAGATGTCGTCGGTTTTACATATCTGGACAACCAAAGCCGCGCTGTCAT
CTTTTCAAGGGAAGCCAATCTCTCCTACACTGTACTTTGTTAGACTAGAC
CAAGGACCGGGAAAGTTTTTTTTTATGTGAGGTTGTGAAGGTGACTCTGT
CCGGTTTCAGGAATTTGAGGGGACCGGTTGGCATTCTTTTTTTGAGGTTG
CTGCACGACCGGTTTCTCTTTTGCTTTTGGTGGCATAAACGTTTCCTTTG
CCCCGCGGGCTAACTTGTAAGTTG
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Coding sequence (CDS) from alignment at Scaffold_618:701652..707475-

>EsuBft1105_5a-0001 ID=EsuBft1105_5a-0001|Name=EsuBft1105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1671bp|location=Sequence derived from alignment at Scaffold_618:701652..707475- (Ectocarpus subulatus male Bft15b)
ATGGAAGAGGCCGACGCTCGCCTGCAGGAAGTCGTCGCTTCGCTGCTCAA
CGAGCACGGGGGTAGCCACGAGCAGGCGCTCCGGCAGACGTTCGCGTGCC
TGCACAACTCTGGGCTGTACGAGGCGCAGTCTGCCGCTGAGGAGGAGCAG
AGGGAGCAGCAGGTGCTAGCGGTCTTCCGCTCGTTTCCGTTCCGAACCCC
GGCCGCCCCCGAGGGCAACGGTGCCGGGAGCCTCGTGGAGGAGACCCAGG
CGCAGCCGCCGCCGCCGCCGGCTTATAACAACGCCCTCGCACGGGAGCCT
GAAGAGGCGGGCGAGGTGACACCGGCCCAGGTGGACCCGGAAAACGTTGG
GGAGGACGCTGGAGCTCAGCCAGCCCCCGAGGCTTTGTTGCCGCTGAATC
CGGTCGAGCCCCAACCGGCAGACCAGCAGCCATCTCCGGCGCCTCCAGGT
CCGGAGGTGAGTCACCAGGGAGCTGCCCCGCCGTCCAACCTCCCACCGCA
TCAGCCACCTGCTGGAGAGGACGCGGCACCGCCACGAGGCTCGGCTACTC
CCGAGAGTTTCGCGTCTGCGGCACTGGATACTGGAGACGCAGTTGTCGCA
GCGGCAGCGGCAGCGGCGGCCGCGGCGGCGGCCGGGGGAGGCGTTGAGGA
GACGAAGGGCGAAGAGAGGGGCGAGGGGATAGTATATCCCGAGACTGGGG
AAGCGGAGGAGGGGTTGCCGGTCACCATAGAGGAAGGCGCGGTGGGGGCA
TCAACGGAAGAATCGGGGTCACAGCTGGAAGCGGGGGGGCAACAAGAAGT
GACAGGAAACGGAGCGGCGGGAGCGCACGGCGAGAGCACTTACGGCTGTA
ACGGCACCGCGGCGTCCGAATCCAGCAAAGGGGTAGTGTACAGCGACCCG
GAGAGCACCCGGCAGGAAGGGAGCACGGCATCACAACAGCAGGAACCACC
ACCTCCACGAGAACAGGAGGCGGCGCGAACCCCTCAGGTTAACGGAAGTG
CTCCCACCGCCACCGCCGCGGCCGCCGCCGCCGCTGTGGGTGAAGCAGCC
GGAGGAGAGAGAAATATGGACGCTCCCGCGCGCCCCGCGGACGCTGGCGA
TGGTGGTGCTGCCGCTTCAGCGACCGTTCCAGCTCCCGCCGCCGGTACCG
CCGGCGCCGCCGCGGCCGTGTCTGCGCCGACGACGACAGCGGTAACAGAG
CCACACCTCAAGACCGCTGGGCAGCCCTTGACCCACGCGAACCGCGCGGA
GTCCCCGACGGGGATGTCGACCGACCTCCAGGACAAGCTCAAGGCGCTCA
AGTTGCGCCGCAAGCACCGGTTCGTCACCATGCGAATCGAGGGGACGGAG
GTGGTGGCGGAGACGGTGGCGGCGCCCGCGGAGGGCCCGGCGGAGCTAAA
GGCGGCGCTGCCGTACAGCGACTGCCGGTACGCGGTCTACGACCAGGCGA
TCGTTACCGTGGATGGCCGCAAGGCCAACAAGCTCTTCTTTTTCACGTGG
GTTCCGCACAACGCGACGCCCCACAACAAGATGGCGTACTCTCACGGGAA
GGTGACGGTGAGGCAACGCCTGGAGGGTTTGTACGATGTGGCGGCCAGCA
GCTTCGGGGACGTGGAGGTGGCGCTGGGGTTGGTCGACGAGGACGAGGAA
GACTCAGACATCGACTTTTGA
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