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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LBM6 |
| ProteomeId | EsuBft1099_6 |
| Protein domains | PTHR21493 |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SignalP-TM |
| Protein domains | IPR002921 |
| Protein domains | SignalP-noTM |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | IPR029058 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | lipase os:rhizomucor miehei pe:1 sv:2 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2721 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 2.57e-272 |
| EggNOG OGs | KOG4569@1|root,KOG4569@2759|Eukaryota |
| Ec32 ortholog description | Lipase domain protein |
| Ec32 ortholog | Ec-27_003400.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | phospholipase A1 activity |
| COG category | G |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0005975 |
| GO | 0016788 |
| GO | 0009056 |
| GO | 0006629 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1099_6a-0001 ID=EsuBft1099_6a-0001|Name=EsuBft1099_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2721bp|location=Sequence derived from alignment at Scaffold_365:179757..184446- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCACACGACCCCGTGTACACATGAGCACCGAGCACAACCACCGCTTA CTTTGAGCGCGCGTTGTGTGGTTGTGTCACCTGTCGGCGATATGAAGGTC TCAACGCCACGGTTGGGGCTCAACCCTCTTGCCGTCTCGTTGCTCCTATT CTTTTCCCCAGCCTCCGCCGATCCCGCCCCTGTGACCGATCTTACAACAA CAGTTGCTACATCGTCCGCCGGCGACGGTGGGCTGGGCTTGTGCTACGAC GAGGGGCTCGCGAGCGTGATCGTCCGCTTGACGGAAGCTGCGTACTGCAC ACCGCAGCTCGCGTCGTGGAGCTGCAAGGCCTGCCAGCACTTCCCGGGCA TGAGGAACGTCACCGTAATCAACGGCGAAAAGCGCAACGTTCGGGGCTTT GTGGGAGTCGATATCGGGGACGCCGAAGCATCAAACCGGTACACTTCAAC TCCGCGCGGACCCGGCCCTGACGATCGACGACACCTCCGCGCTGCAGAGG GTGACGACAAGGGCGCAGGTGGGGCTGCACGATCCGGTAAACCGCGCATC GTGATTACCTTTTCGGGGACGGACCCGAGCAGCGTCAAGAACTGGATCGA CGACCTGGAAGCTACTACCGTCCCCAACACGTACGGGGGATTATGCGAGC AGTGCCAAGTCCACCGAGGCTTTCTAGCGGCGTATGACCTGGTGAAGGAC CAGGTCCGCTACGCGATTGGGCAGCACATGCAATACAACCCGCACGTCCA GATCCTCATCACCGGCCACTCCTTAGGGGCGGCGCTGGCCGTGCTCTGCT TCTTGGACCTCCGGGTGAATAGGGGTCTCGGGCAGGGACCGAACTCGTCG GTCTCCTTCGCACCTCTCTACCTCTTCGGCTCCCCGCGGGTCGGGAACGA AGCGTTCGCGACCTTGACGACCCGCCCGGGCGTTTCGATCTTCCGGCTGG TGCACCACCGTGACCCGGTGCCACACCTGCCGCTGGAGGCCTGGGGGTAC CACCACCCGCCCACGGAGGTGTTCTACACCGAGGACCAGTCGAGCTACCA GGTCTGCAACAAAAGCGGGGAGGACGACACGTGCTCGAACCAATTCTGGG CGATTTTCGGCAATATTGAGGACCACCTGTGGTACCTGGTGGTGAACTAC AGCACGGCTTACATGCAGTGCCAGCTCGACGGAGAATCGCGAACGGACAG AGAGGCGGCGCCGGCGCTTGCTCCGCCGGCTGCGGTCGCCTAAGACCCGG GCCACAAGGGGTGTGATGCTTCTTTTTTGACGGACGACGGCGTGACGAGA GCACCCGTGCGTACGAGATGGGCGGAGGAGACCATCGTTTATCTCACGGC AGAGGCAGGGGCCGCTATATATCCACGTGTATTTGAGCAGGCTGTCTTGC GTACGACTCGCCCAGAGGGCTTAGGACGGGACGGAGGCGGAGGCTTGGGC GGTACGTAACGGATGCTGCGGTTGCGGCTGGGCTTCTGTCGCCTGCTGTG GTGACGGGGCCGTTGCTGTCGAGTACGGGCTATGGTTACAGGTGTCCGAC TGGTTGGAAACAGGAGGTTGCAAGCTCTTTATCCCTTCCTAATGGAACCC GGATTCCGCGCTCATAGCGATTGGTAGATTGGTGGGGGGCCGGGGCCGGG GCCGGGGCCGGGGCCGGGGCTGGGGGAGAGAGCTAGATTCAGGTGGTAAC CCGAAAATGACAAGAGAGGCGGCTCTCAAGGGAGGAGGCAGAAGGTTGAA GAGCTGCCGTCGACTGCTGAGGGCGTAGCCGCAGCTGTTGTGTCAGTTTT CGGGGATGATTTGGGTGTTATAATGCAGGGCCATTCAATACCCAACCCTT GTTGATATTTTTCCATTCTATTGTTGCTGGTTGGCAGTCCCTCCTCCGGT AAGGGTATAGCAACCGCCGACGCTCTTCAATTATGCACGCCCTGGTTGAT AGCGGTTTATTTTTGGGGAACAGCCTGCCTTCGAAGCCTGGTGGAGGAGT GGGGATGTCATGCCATCAGAGCAAGCAGTGGTAGGCGTAGTGCCGAAGCC CTGTGAAGGGAGCGCTCATCTCACGCGTTGGGCGGTCCCTGTGCAGGCTG GGCTGGTTGATTAGTCGTGCAGGTTTGGAGCCGACAATGGCGCCTTCGAA CCTCCTGTGGGTGCTTGTTGGGTCGGTGTTGCTAATGGTAACAAGAACAA GAATGTTGTTTGCAGTTTTCTTGGGGGGGGGGGAGGTCACATCCTTGTCC ATATATATTTGTAAAAATGGCGTCCGCATTTGCTCGAATGAGGAGTGACG CAGAAGAATTTCTAGTGGTGCATGCGTTGTACGTCGCTTTCCAAATGGTG GGCGGGGTAGCATCTCGTATATCCGGTGGGTCGTCTGTACGAAGTAGTAC GTGATTGCCCGCGAACGCAACTAGAGGCAAGAAGAATGAGAATATCAGGG GCGGTGTTCGTCCGTTGCCCTTAATTTTCAAACGGTCACACTGGGGTTGG AGGTGCCAAGGTGGGAAAAAAGCGGCGGGGTGTTAATCCATCTTCGCTGG GGGAGACCCCTTAAGGCAAACAGCCAGTGAGTAGAAGCTAAAATTAAGAG GAATTTTTGTGGGCATAAGATACGCGTAATGAAAAATTGCCTTCGGAAAG ATCCAGCGGAAAATGGGCAATCTGTTCTGCGCAGCACACGAAACGGCGAG GATATACCCTCCACACTCTCC back to topprotein sequence of EsuBft1099_6a-0001 >EsuBft1099_6 ID=EsuBft1099_6|Name=EsuBft1099_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=383bp
MKVSTPRLGLNPLAVSLLLFFSPASADPAPVTDLTTTVATSSAGDGGLGL CYDEGLASVIVRLTEAAYCTPQLASWSCKACQHFPGMRNVTVINGEKRNV RGFVGVDIGDAEASNRYTSTPRGPGPDDRRHLRAAEGDDKGAGGAARSGK PRIVITFSGTDPSSVKNWIDDLEATTVPNTYGGLCEQCQVHRGFLAAYDL VKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGP NSSVSFAPLYLFGSPRVGNEAFATLTTRPGVSIFRLVHHRDPVPHLPLEA WGYHHPPTEVFYTEDQSSYQVCNKSGEDDTCSNQFWAIFGNIEDHLWYLV VNYSTAYMQCQLDGESRTDREAAPALAPPAAVA back to topmRNA from alignment at Scaffold_365:179757..184446- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1099_6a-0001 ID=EsuBft1099_6a-0001|Name=EsuBft1099_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4690bp|location=Sequence derived from alignment at Scaffold_365:179757..184446- (Ectocarpus subulatus male Bft15b) ATGCCACACGACCCCGTGTACACATGAGCACCGAGCACAACCACCGCTTA
CTTTGAGCGCGCGTTGTGTGGTTGTGTCACCTGTCGGCGATATGAAGGTC
TCAACGCCACGGTTGGGGCTCAACCCTCTTGCCGTCTCGTTGCTCCTATT
CTTTTCCCCAGCCTCCGCCGATCCCGCCCCTGTGACCGATCTTACAACAA
CAGTTGCTACATCGTCCGCCGGCGACGGTGGGCTGGGCTTGTGCTACGAC
GAGGGGCTCGCGAGCGTGATCGTCCGCTTGACGGAAGCTGCGTACTGCAC
ACCGCAGCTCGCGTCGTGGAGCTGCAAGGCCTGCCAGCACTTCCCGGGCA
TGAGGAACGTCACCGTAATCAACGGCGAAAAGCGCAACGTTCGGGGCTTT
GTGGGAGTCGATATCGGGGACGCCGAAGCATCAAACCGGTACACTTCAAC
TCCGCGCGGACCCGGCCCTGACGATCGACGACACCTCCGCGCTGCAGAGG
GTGACGACAAGGGCGCAGGTGGGGCTGCACGATCCGGTAAACCGCGCATC
GTGATTACCTTTTCGGGGACGGACCCGAGCAGCGTCAAGGTATGTTAATT
GGAGTGCAACATACGTGGTCTAAATAGTCCGCTGCTGGTTGGTTCCTTGG
GGATGATGAAAAAGTTCATGAGCGCGGGTCCTGCTCCAACCATCCACTCC
AATGGAGGCGGGTTGAAGACCTCAAAGCAGCAGTGTACAAGAGAATGAAG
TTGAAGGACACCGTCGCGTAGCAACTGCTTGTTAAGGTCCACACACATGA
GACCAAAATGTAAGCAATTTTTGGAAACAAACGCGGCGAGAATTCTTTGG
GGGGGGCGCAAAGAGGCAAGACAAGGAAGATTGTTGTTCTGCTCTCTGGA
TGCACGCACGCGGCTCATGGCAGCCGCCGGACCTCCCGTGAGCAGAGAGG
TTTGTGGACGACTAACACAACAATCTCTCGCGGTCCCCGTCCCCTGTCCT
GTATAGTTCCAGCAATCTTAGTCAGCCCCAACCGACCGGCAGCAGCAGGT
GGTAGCACAAACGATTGCATTACTGCAACACTCGCTGCTTTGCCGGAAAG
GGACCAGAGAAAAACGCCCAACCGGCGCGTGACCACGAGTGCAGTAGTAC
GCCTACCGTAGACTCCTCCTTCATACCGCCTGACCAAGTGCTGTCGCCCA
CCAACATCTGCATTAACGTTACTGCTATTAATCTATGAACACTGTTTTTT
ATGCGTTAACTTTACTCTTAAACCCATGTATCAACACTAACTACTGCTGT
TTTTTTGTCGCGACGCAGAACTGGATCGACGACCTGGAAGCTACTACCGT
CCCCAACACGTACGGGGGATTATGCGAGCAGTGCCAAGTCCACCGAGGCT
TTCTAGCGGCGTATGACCTGGTGAAGGACCAGGTATGTATAATGGTGTAC
TGCTGTATATGCATGCAAACCCAGTGTCATAGTCGTCAGGTCCCAATAGC
CTACATACAACATACGTCAGCTCTGAAGGCCGTATATTGTGCGATGCGAA
GCGGTAGGGTAGGTGATATGGTGTATGAGTTGTCGGTAACGGGGGTCGCT
ATCTGTGCGGAGAGTATCATAACTCGCCTCTTTGAGTTTCCCGCGTCCCC
CCTCCCTTTCCGTGCACGTTGTCTACTGCACGCGAAATCTCCTCTCTGTC
CACCCTCTTCTTTTTTCTCACGCTCACCTCGCCGCACCCCGCCGCTTGCT
GCTGCTGCTGCTGTTGCTGCTGCGGCCATACTGCTGCCGCTGCTCGACCG
AAGGTCCGCTACGCGATTGGGCAGCACATGCAATACAACCCGCACGTCCA
GATCCTCATCACCGGCCACTCCTTAGGGGCGGCGCTGGCCGTGCTCTGCT
TCTTGGACCTCCGGGTGAATAGGGGTCTCGGGCAGGGACCGAACTCGTCG
GTCTCCTTCGCACCTCTCTACCTCTTCGGCTCCCCGCGGGTGCGTGGGTG
TGGGGTGTTGGCAACCAAGCCGGGTCGTGGATTTCATGTGCCATGCGCGA
ACAGCGCATGGCCGTCCACGCCACGGTGCGAAAGAAACAATCGACGCGTC
GCTCGTGACCTAGTAGCTACGGGTTGCGTGGTGACTTGGTTCGTTTCAGT
CTTTCCCTCTGAAGCTCGTGGTCGGGGAGATTTTGAGCCAAGCCTTTGGG
AACGACCCGTTTGCTGGACGGCGCTACGCCGCTACTTTATCGATCGCACA
CAGAGGTAAAATACAGTCGGGAGGCGCCCATTTTCTGTAGTCCTGTTCGA
TGACGTGGCTGACATCTGGTACGCTCCTTTCACTGCGATTTTGTGTGGCT
GCTTTGTGTCTGTCTCGCATTGTTCCGCCTGTTGTTTTTTCCCGACGGAT
GGAACGGGTTGTTCCGTGTGAGCCAAGGTCGGGAACGAAGCGTTCGCGAC
CTTGACGACCCGCCCGGGCGTTTCGATCTTCCGGCTGGTGCACCACCGTG
ACCCGGTGCCACACCTGCCGCTGGAGGCCTGGGGGTACCACCACCCGCCC
ACGGAGGTGTTCTACACCGAGGACCAGTCGAGCTACCAGGTCTGCAACAA
AAGCGGGGAGGACGACACGTGCTCGAACCAATTCTGGGTGAGTTTTTTGT
GGATTACCTTTGCCTTTTGCTGGTGTTGTTGTGCTTCGGCGATCAATTCT
CTCGCGTTCGTGTGTGATGTGGGATTGCGATATTTATAGTTTATCCTGTG
GGCGTGTAACGTCGTTAGGTTAATTGTGATCTGGTGGCTATGTGCAGGCG
GCGCGTGGTTGATGGTGATGTTGCGGGTCTCCGGTGCATCTTCTATCCTG
AAACCAGCAGCAACAGCCTCAGCAGCAAACGAAATTTAGAGTTGGGCATT
CGTGATTGAGCATCTATGTGCTTTGACGTGTATCTCGTTGTCGGTCAAAT
CGGACCAAAACAATGACGCTCAATGAACCACGACAGCTGTATCCTGAGAA
AATAAACGCGACGATACCCGATGAAACCAACGCCCCATATGCCCTCGGCA
CACCACACCACACCGCAGGCGATTTTCGGCAATATTGAGGACCACCTGTG
GTACCTGGTGGTGAACTACAGCACGGCTTACATGCAGTGCCAGCTCGACG
GAGAATCGCGAACGGACAGAGAGGCGGCGCCGGCGCTTGCTCCGCCGGCT
GCGGTCGCCTAAGACCCGGGCCACAAGGGGTGTGATGCTTCTTTTTTGAC
GGACGACGGCGTGACGAGAGCACCCGTGCGTACGAGATGGGCGGAGGAGA
CCATCGTTTATCTCACGGCAGAGGCAGGGGCCGCTATATATCCACGTGTA
TTTGAGCAGGCTGTCTTGCGTACGACTCGCCCAGAGGGCTTAGGACGGGA
CGGAGGCGGAGGCTTGGGCGGTACGTAACGGATGCTGCGGTTGCGGCTGG
GCTTCTGTCGCCTGCTGTGGTGACGGGGCCGTTGCTGTCGAGTACGGGCT
ATGGTTACAGGTGTCCGACTGGTTGGAAACAGGAGGTTGCAAGCTCTTTA
TCCCTTCCTAATGGAACCCGGATTCCGCGCTCATAGCGATTGGTAGATTG
GTGGGGGGCCGGGGCCGGGGCCGGGGCCGGGGCCGGGGCTGGGGGAGAGA
GCTAGATTCAGGTGGTAACCCGAAAATGACAAGAGAGGCGGCTCTCAAGG
GAGGAGGCAGAAGGTTGAAGAGCTGCCGTCGACTGCTGAGGGCGTAGCCG
CAGCTGTTGTGTCAGTTTTCGGGGATGATTTGGGTGTTATAATGCAGGGC
CATTCAATACCCAACCCTTGTTGATATTTTTCCATTCTATTGTTGCTGGT
TGGCAGTCCCTCCTCCGGTAAGGGTATAGCAACCGCCGACGCTCTTCAAT
TATGCACGCCCTGGTTGATAGCGGTTTATTTTTGGGGAACAGCCTGCCTT
CGAAGCCTGGTGGAGGAGTGGGGATGTCATGCCATCAGAGCAAGCAGTGG
TAGGCGTAGTGCCGAAGCCCTGTGAAGGGAGCGCTCATCTCACGCGTTGG
GCGGTCCCTGTGCAGGCTGGGCTGGTTGATTAGTCGTGCAGGTTTGGAGC
CGACAATGGCGCCTTCGAACCTCCTGTGGGTGCTTGTTGGGTCGGTGTTG
CTAATGGTAACAAGAACAAGAATGTTGTTTGCAGTTTTCTTGGGGGGGGG
GGAGGTCACATCCTTGTCCATATATATTTGTAAAAATGGCGTCCGCATTT
GCTCGAATGAGGAGTGACGCAGAAGAATTTCTAGTGGTGCATGCGTTGTA
CGTCGCTTTCCAAATGGTGGGCGGGGTAGCATCTCGTATATCCGGTGGGT
CGTCTGTACGAAGTAGTACGTGATTGCCCGCGAACGCAACTAGAGGCAAG
AAGAATGAGAATATCAGGGGCGGTGTTCGTCCGTTGCCCTTAATTTTCAA
ACGGTCACACTGGGGTTGGAGGTGCCAAGGTGGGAAAAAAGCGGCGGGGT
GTTAATCCATCTTCGCTGGGGGAGACCCCTTAAGGCAAACAGCCAGTGAG
TAGAAGCTAAAATTAAGAGGAATTTTTGTGGGCATAAGATACGCGTAATG
AAAAATTGCCTTCGGAAAGATCCAGCGGAAAATGGGCAATCTGTTCTGCG
CAGCACACGAAACGGCGAGGATATACCCTCCACACTCTCC back to topCoding sequence (CDS) from alignment at Scaffold_365:179757..184446- >EsuBft1099_6a-0001 ID=EsuBft1099_6a-0001|Name=EsuBft1099_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1152bp|location=Sequence derived from alignment at Scaffold_365:179757..184446- (Ectocarpus subulatus male Bft15b) ATGAAGGTCTCAACGCCACGGTTGGGGCTCAACCCTCTTGCCGTCTCGTT GCTCCTATTCTTTTCCCCAGCCTCCGCCGATCCCGCCCCTGTGACCGATC TTACAACAACAGTTGCTACATCGTCCGCCGGCGACGGTGGGCTGGGCTTG TGCTACGACGAGGGGCTCGCGAGCGTGATCGTCCGCTTGACGGAAGCTGC GTACTGCACACCGCAGCTCGCGTCGTGGAGCTGCAAGGCCTGCCAGCACT TCCCGGGCATGAGGAACGTCACCGTAATCAACGGCGAAAAGCGCAACGTT CGGGGCTTTGTGGGAGTCGATATCGGGGACGCCGAAGCATCAAACCGGTA CACTTCAACTCCGCGCGGACCCGGCCCTGACGATCGACGACACCTCCGCG CTGCAGAGGGTGACGACAAGGGCGCAGGTGGGGCTGCACGATCCGGTAAA CCGCGCATCGTGATTACCTTTTCGGGGACGGACCCGAGCAGCGTCAAGAA CTGGATCGACGACCTGGAAGCTACTACCGTCCCCAACACGTACGGGGGAT TATGCGAGCAGTGCCAAGTCCACCGAGGCTTTCTAGCGGCGTATGACCTG GTGAAGGACCAGGTCCGCTACGCGATTGGGCAGCACATGCAATACAACCC GCACGTCCAGATCCTCATCACCGGCCACTCCTTAGGGGCGGCGCTGGCCG TGCTCTGCTTCTTGGACCTCCGGGTGAATAGGGGTCTCGGGCAGGGACCG AACTCGTCGGTCTCCTTCGCACCTCTCTACCTCTTCGGCTCCCCGCGGGT CGGGAACGAAGCGTTCGCGACCTTGACGACCCGCCCGGGCGTTTCGATCT TCCGGCTGGTGCACCACCGTGACCCGGTGCCACACCTGCCGCTGGAGGCC TGGGGGTACCACCACCCGCCCACGGAGGTGTTCTACACCGAGGACCAGTC GAGCTACCAGGTCTGCAACAAAAGCGGGGAGGACGACACGTGCTCGAACC AATTCTGGGCGATTTTCGGCAATATTGAGGACCACCTGTGGTACCTGGTG GTGAACTACAGCACGGCTTACATGCAGTGCCAGCTCGACGGAGAATCGCG AACGGACAGAGAGGCGGCGCCGGCGCTTGCTCCGCCGGCTGCGGTCGCCT AA back to top
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