EsuBft1095_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1095_6a-0001
Unique NameEsuBft1095_6a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_3contigScaffold_3:184769..199145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G0P9
ProteomeIdEsuBft1095_6
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsSIGNAL_PEPTIDE
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsTRANSMEMBRANE
Protein domainsIPR007248
Ownerapollo_admin@sb-roscoff.fr
Notepxmp2 4 family protein 2 os:dictyostelium discoideum gn:ddb [Automatic annotation]
Nb exon4
Max annot lvl2759|Eukaryota
Length1325
Hectar predicted targeting categorymitochondrion
Evalue4.27e-208
EggNOG OGsKOG1944@1|root,KOG1944@2759|Eukaryota
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-09_001220.1
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameSYM1
KEGG koko:K03259,ko:K13348,ko:K13349
KEGG Pathwayko01521,ko03013,ko04066,ko04146,ko04150,ko04151,ko04211,ko04910,map01521,map03013,map04066,map04146,map04150,map04151,map04211,map04910
KEGG ModuleM00428
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006066,GO:0006067,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016999,GO:0017144,GO:0019866,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034308,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901615
DescriptionBelongs to the peroxisomal membrane protein PXMP2 4 family
COG categoryC
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Cross References
External references for this mRNA
DatabaseAccession
GO0005739
GO0016021
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1095_6aEsuBft1095_6aEctocarpus subulatus male Bft15bgeneScaffold_3 184769..199145 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1095_6a-0001EsuBft1095_6Ectocarpus subulatus male Bft15bpolypeptideScaffold_3 184862..199077 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1095_6a-0001-exonagat-exon-5898Ectocarpus subulatus male Bft15bexonScaffold_3 184769..185064 +
EsuBft1095_6a-0001-exonEsuBft1095_6a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_3 187169..187285 +
EsuBft1095_6a-0001-exonagat-exon-5899Ectocarpus subulatus male Bft15bexonScaffold_3 187997..188212 +
EsuBft1095_6a-0001-exonagat-exon-5900Ectocarpus subulatus male Bft15bexonScaffold_3 198450..199145 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1095_6a-0001-exonagat-five_prime_utr-579Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_3 184769..184861 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1095_6a-0001-cdsEsuBft1095_6a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_3 184862..185064 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1095_6a-0001-exonagat-three_prime_utr-919Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_3 199078..199145 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1095_6a-0001 ID=EsuBft1095_6a-0001|Name=EsuBft1095_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1325bp|location=Sequence derived from alignment at Scaffold_3:184769..199145+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GAGGATAGGGCGGTGAGAGGGAGAGTGTAGGAGCTGTAACCCGGGTATCG
TCCAGCAAACAACGCACGCACATCCACTTCGGAACGAATTGCGATGAAGG
TTTTCGGTTCCTCCCTTATCGCTGCCTTGGCAAACCGGCGGTCGACGCTT
ATCAACGGCGCCGTGGGATTTTCGACGTTCGCCGTGGGGGATGCATTGTC
CCAGGGCGCTCGGCCCCAGTCCCAGCTCGTAGTGGCTGGGTGGAGACGGC
AGCATCAGTCGGAGGAGTCATCCTGGCAGCAGCAGTTCATCGACAGGACG
AGAGGAGTGGACTACGCCCGTAGCGCCAAGGTCGGGCTGTTGGGCATCAT
GCTCAACGGCTTCGCCCTCGGGGCTTGGTACCGTGTCCTCGACCGCTACA
TCGGCTCTGACAGGACACGCTTCCAGCAGATCCTGAAGAAGCTGGTGGTC
GACCAGATGGTGTACGCCCCGTTCTCGATCACCAGCTTCGTCGGCTACGC
GGCCGTGCTTAACGGCGGCGGCCCTGCCAAGGTAGTGGACGAGACCAAAA
AGAACCTAGGGGAGACCTTCTGGTCAATCTGGCTCACCGATTGGAAGGTC
TGGCCGGCCGCCAACCTCTTCATGTTTAGGTTCATCCCTTCCTCCTACCG
GCCGTCCTTCGCCAGCATGGTGCAAGTGGCGTGGCAGGCCTACCTGTCGA
GCGTCAGCTACGACAGCCCACATCACTACCACCACCACCACCACCACCAG
AAGACCCCGGTCGCCACCATTCAGGCCGGGGTCGCCATCGAGGCCGACGG
CGGCAGCAGCGGCGCGGTACTTGTCAGGGGGGGGGAGGCAGGGAAAGACC
TCGCGGGCAAGGCGGCGGCAGCCGTGGCCGCCGTCGCCAAAACTGGGGGA
GAAGATGAGAGCGTACCATCCCCTGGGGTTCCGGTGGGGAGTAACGCCAT
CGCTGGCGCTGGAACGCCACGAGTGGCGGTGGATAGACGGGCAACCGGCC
GTTACGCTTACACGTCTTCCGTCTCCTCCTTCACTAATACCCTTGGCAGT
CATGCTTGCACCAGCGGCGGAATGGCAGTCGAGGGTGGCGATATAAGTAG
CGGCGCCAAGAGCGCCCGCCCGCAAGGGTATGGCGCGCTTCTCAACGGCG
GCGGCGGGGGTGGTGGTGGTGGTGGTCGGGTGCAGGCGGTGGCGGTGACG
AAAGGGTCATCTTCTTCTTCTTCTTCTTCCCTGGTGGCCAAAGCCAAGGA
GTTGTAGTAGCCCTCATCGAGCCCGTATGTGCTAACTCGTTGTTCTCCGC
GCATCGGTGAGGAGGAACTTGATGT
back to top

protein sequence of EsuBft1095_6a-0001

>EsuBft1095_6 ID=EsuBft1095_6|Name=EsuBft1095_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=387bp
MKVFGSSLIAALANRRSTLINGAVGFSTFAVGDALSQGARPQSQLVVAGW
RRQHQSEESSWQQQFIDRTRGVDYARSAKVGLLGIMLNGFALGAWYRVLD
RYIGSDRTRFQQILKKLVVDQMVYAPFSITSFVGYAAVLNGGGPAKVVDE
TKKNLGETFWSIWLTDWKVWPAANLFMFRFIPSSYRPSFASMVQVAWQAY
LSSVSYDSPHHYHHHHHHQKTPVATIQAGVAIEADGGSSGAVLVRGGEAG
KDLAGKAAAAVAAVAKTGGEDESVPSPGVPVGSNAIAGAGTPRVAVDRRA
TGRYAYTSSVSSFTNTLGSHACTSGGMAVEGGDISSGAKSARPQGYGALL
NGGGGGGGGGGRVQAVAVTKGSSSSSSSSLVAKAKEL
back to top

mRNA from alignment at Scaffold_3:184769..199145+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1095_6a-0001 ID=EsuBft1095_6a-0001|Name=EsuBft1095_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=14377bp|location=Sequence derived from alignment at Scaffold_3:184769..199145+ (Ectocarpus subulatus male Bft15b)
GAGGATAGGGCGGTGAGAGGGAGAGTGTAGGAGCTGTAACCCGGGTATCG TCCAGCAAACAACGCACGCACATCCACTTCGGAACGAATTGCGATGAAGG TTTTCGGTTCCTCCCTTATCGCTGCCTTGGCAAACCGGCGGTCGACGCTT ATCAACGGCGCCGTGGGATTTTCGACGTTCGCCGTGGGGGATGCATTGTC CCAGGGCGCTCGGCCCCAGTCCCAGCTCGTAGTGGCTGGGTGGAGACGGC AGCATCAGTCGGAGGAGTCATCCTGGCAGCAGCAGTTCATCGACAGGTAC GGCGTCTCATGTCATATTCTTATTTTTGACGGGGTTGACAGGGCAGGAAA ATTGTAGCGGCGCGGCTGCAAAACGGAGCTACCGCCGTGGATTATTTTCC CGGGCGCAACAGGGCGGCGCGGCCGCACAGCGTGTAGAAGCCAAAATCTC ACCGCTTGTAGCATCCCCCCTTTGCTGCACCTCTCAAGGAAAGATTCAAG GTACAGCTCGAAACACGGGCGCGGATGACATCATTCAAGAAGAATTCGTT TTGCTCATGGTGTTTAAGAGTTGTTTTCGCTTGTTGAAGCGTACTTCGCA GTAGAATGCTTGTAGTCGACTCATACATGGGTTGGTCACGGCAGGCCAAC ACGAGCACAGCCGTCAACCGAAACCCGTAGAGACTTCATAGCGGTATAAT GTACAGCCACCTTAGCCTCCGAGCTAGCAATGGAACTCCTTGAAGCCGTT GGCACGCGGCCCGGTGTCCCATGACTGAACCCAGCGTGGTCTCTGCTCCT TGTTTGTCTCAATTGCTCATGGAGCCGCACACAATGATACTTGGTTTAAA GTCTACAGTCTACAGCAGACTACCAACCGTGGCACAAGATACCACGCCCC TCGCGCCGACTTCAAAGCCCGATTACTCGGCAGGAGAAGCAGAGACGGTG CCGAAAATGGCGGCATTGGAACCGTCTCGTCGAGAGCTTTCTGTGACGAG ATTCATTGCAGTGTGGAGCGTATCCAGCCACTGGCTGTGTGCAAGTTTGC TGCTTCGTTTCAATCCATTTCCTTCCTTGTCCTTTGTTCCTCTCTCAGTC GCTCGCTATCGCTTAGGGCGTGTCTTAGCTGCACTTTTCTGGACAGGGAG CAGGGAGCAGGGAACTCGGAATTTTTGTCTGATTGGTCGGACACACAAAA TATATTTCCTGGAAACAAGAATTGACCCACACGTTCCCTTTTTGAGGTAG TTACGCCGCTCCATAATTTACACACCACAGGGAACGTGGAACACGGGCTC TTCGGTGGCGATTCAGGACGTGGTGAAATGTGTGTGGTCACTCTCGGGCA TGTGGCTGCCACACGTGCTGCATGATACCAGTTCAAGCGGTATAGGCATT TTCACCATCATCAGGTGTCTTGCATGCAACAAGACGGCGGCGGATACTCC TGTGGCCGTTGTATGGGGGAAAATTCAGTGTCGTAGAAACGACAAGCTGC CGATGACCACAACTCAAAAAGCAAGTCTCGCAGAGCACTCTCGAGGGTGC GAATTGCATGACGAGCACCGCCTGTTCTAGCCGACATACCTAGCACATAT GTTTGATGTGCGCGCGTCAACAGCTTCCTTCATACACCACTCCTCCTCCT TCCTCTACCCCCCACTCGTCTTTCTGCACCCAATGATTGTATGTGTTGCC TTTGAGTGCGTGCGGGCCGCGCGCGCTGAACTGATCAGTGTTCCCTGGAG ATGTGGTGCTTGTTTTGACACAAGACTTGGAAGAGGGAACAGGGATGTTC CCCAACAGGCAACAGGGATGTTCCCTGTCCTCCAAAGTGCAATTACGACA CGCCCTCACTCCCAGGCGACACTGAGCCGCAGGGAACGTCATACACCGCA TGGTTGCGCTTGTATGAACTCGGAGTATGAAGACCCTTGCGCAGATGCTC CGTGTATCTCTCTGCAAGAGATATCGGCCCAAACGGTATCTTAGCCTAAG GGTCCACATACATTCCATGACATTTCCGAAAATGGTAACACCTCTTCGTC GTGGAGATATCGAGCTTTGAAAATCGGTCCAGGGGGCTTGGTATCTCGTG TTACCCACCGTATTCGCAATCAAGCCATGACTACACAGGAGCGCCGCACG CGTATGCACACGTGGTCTTCCTTATAACGCAACATCCGGCCGCTCAAGTA GCGCGTGGGTTTTGAGTCCAATCTGACAATGATCCTCCACCTGCTGCACA GACACCCGACGGGTGAGCTCACCCAACAGCTGCTCCCATCCCCTGCTTTG CCTCCGCTCTGTTCAACCTCTTCCACGTTGTTGTTGTTGCTGCTGCTGCT GCCGCCGCTGCTGTTTTCCCCGCAATCTGACGCCTTCTTTGGCGCCGAAG GACGAGAGGAGTGGACTACGCCCGTAGCGCCAAGGTCGGGCTGTTGGGCA TCATGCTCAACGGCTTCGCCCTCGGGGCTTGGTACCGTGTCCTCGACCGC TACATCGGCTCTGACAGGTACGCACCGTAGGTGGCATGACGATGACGGAA GATATCATACCCCGACTTTCGAAGCCTCCTGCTGGAGATCATTTGAAAAT AGAGACCGGGAACACAGTAAACCATAATCGACTTCGTAAGTCGCGAGGGA AGGGATAGCTGTACCCTTCTCGCGATAAAAATACTTCAGGCAGGAACCGC ACGAGGGGGTCCAGCCCCCCCCTCCTATGTGACCCCGGTTGGGTCGTCTA GCTAGTAGAAGTGGAGGATAGGGGCCAGAGGGGCAGACGACAGAATCGAA TGATGGGAGAAAAAAAAACACACACACACATGGAGAGACAGACAGACAGA CAGACAGACAAGACAGACAGAGTCGGGGAGGAAACACCCATGCGCAATAG GTTTTGGAATGATGACCTCGAATTTCTCTGGCCTCGTTTTTTTTAAGCAC GCTTGTTTGTTCTCGCCCGCCTGACGTCACCGAGCCCGGCGCAAGAACAA ATGAAAGTAATTGCTTGTGGCCCTTGCTTGTGGTGCATACATACAAGGGT TATTGCGTTATCTCGGACCGATGAGGAACCGCCGACCCGTGCGGTAGTCT CATGGTTTTTTCCATGGTGATTTTCCGTTTGCCTTCCTCGCTTGGTTTTG ACGGTTCTTCCATATGATGATTTTCCGTTTGCCTCGCCCTCACTTTTTTC GACGGAACGGCAAAAACACGAAAACCAGGACACGCTTCCAGCAGATCCTG AAGAAGCTGGTGGTCGACCAGATGGTGTACGCCCCGTTCTCGATCACCAG CTTCGTCGGCTACGCGGCCGTGCTTAACGGCGGCGGCCCTGCCAAGGTAG TGGACGAGACCAAAAAGAACCTAGGGGAGACCTTCTGGTCAATCTGGCTC ACCGATTGGAAGGTCTGGCCGGCCGCCAACCTCTTCATGTTTAGGTGAGA GAGGAACTATTGACAGGAGAGACAAGCGAGCGTGGTCCCGGGATGGGACG AGTGGGATATTGGTGATGTTTGTGGGGGGTATTCATGTGCCTTAGTAATC AGCCCATTGGTTGCGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ACCCCGCACAACATGATCTACTCGGCCACCATTATGGTTACCGCCAGAAA AACAACCGGAGGTAAAAAAAAAACCGGTAACCTGGTTGCCGAGCTCACGA AGTGAATTGGCTTGTTTTACAACGTCTGTCGTTGCCAACCGACGAAAACC CAACCCCGATGGCAAACACCGGGGGGTGCGTACTCAGGGGGGGGGGGGGG GTACTCATAGTGGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCATCC CTACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGGCTCTCA CATCACCAAGCGCGAAGCGCCGTGAGATATTCGGCGAGTCGCATGAAGGG TGCGCTGCATCCTGCTAAGGGTGTTCGGCATCTTGTGCTTACTTCCTTGC GTACGGATGACAGCTGCGTATGACTTAATTTATTTTCTGGTGCTTTCACT TCCAGAGACAGTTGTAAGCACTGTGTAACTGCCTCGAGGGCGCTTGATCA TTTTGACACAAGGTGGTGCGATTATCCCCCTTGCGCGGATTGAGGGTTCT CGGCCCCGCATAACATGATCTACTCGACCACCATTCATGGTTACCGGCAA ACAAAAACAAAGGTAAAAACAAAAACGGTAACCTGGTTGCCGAGTTCACG AAGTGAATTGGCTTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCCATAATGGTTACCACCAAAAAAAA ACGGAGGTAAAAAAACAAACGGTACCCTGGTTGCCGAGTTCACGAAGTGA ATTGGCTTGTTTTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCACGCCGGGTTCT CACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGATATTC GGCGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAAGGGTTTTCGGCATC TTGTGCTTAATTCCTTACGTACGGATGACAGCTGCGCAGGGCTTAGTTTA TTTTCTGGTGCTTTCACTTCCTGAGACAGTTGTAAGCACTGTGTAACTGC GTCGAGGGTGCTTGAGCATTTTAACACAACGTGGTGCGATCATCCCCCTT GCGCGGAGTGAGGGTTCTCCACCCCGCACAACATGATCTACTCGACCACC AGTATGGTTACCGCCAAAAAAAAAAAAACGGAGGTAAAAAAAAAAACGGT AACCTGGTTGCCGAGCTCACGAAGTGAATTGGCGTGTTTTACAACGTCGT TGCCAAGCGACGAAAACCCAACCCCGATGGCAAACACCGGGGGGGGCGGG GGGGGATAATATCTGGGAGGCGTGACCCCCTCTTAGTTTTTCTGAGTCTC TGTTTTCCTGGTTGCGGGAGGGAGGAGAAGTTTGCATGCTTCAGGCCCCG CTGGAGGGCAACGTGGGAACGCTGTGCCCATTTTTTTCGCGCCTGTGTCG TTTCGACGCATCCCTTGCGAACCCTCTCGAGACAGGGGCGGGCGCGAAGA AATTCGAGGAAGAAACTTTGCAGCCCACCTGACCCGCTGACAACACTGCG GCGGTCACGCATGACCTAACTCATCGTCGTTGCCGTCCCTTCCCCGTCAC CCTTCCCCGTCCCCCTTCCTCCTTGAACGCAACGAATTACACTCTCCGCG CCCTTTTGGCCTGCCGGGGGGGTCGGGTTAGGTTCATCCCTTCCTCCTAC CGGCCGTCCTTCGCCAGCATGGTGCAAGTGGCGTGGCAGGCCTACCTGTC GAGCGTCAGCTACGACAGCCCACATCACTACCACCACCACCACCACCACC AGAAGACCCCGGTCGCCACCATTCAGGCCGGGGTCGCCATCGAGGCCGAC GGCGGCAGCAGCGGCGCGGTACTTGTCAGGGGGGGGGAGGCAGGGAAAGA CCTCGCGGGCAAGGCGGCGGCAGCCGTGGCCGCCGTCGCCAAAACTGGGG GAGAAGATGAGAGCGTACCATCCCCTGGGGTTCCGGTGGGGAGTAACGCC ATCGCTGGCGCTGGAACGCCACGAGTGGCGGTGGATAGACGGGCAACCGG CCGTTACGCTTACACGTCTTCCGTCTCCTCCTTCACTAATACCCTTGGCA GTCATGCTTGCACCAGCGGCGGAATGGCAGTCGAGGGTGGCGATATAAGT AGCGGCGCCAAGAGCGCCCGCCCGCAAGGGTATGGCGCGCTTCTCAACGG CGGCGGCGGGGGTGGTGGTGGTGGTGGTCGGGTGCAGGCGGTGGCGGTGA CGAAAGGGTCATCTTCTTCTTCTTCTTCTTCCCTGGTGGCCAAAGCCAAG GAGTTGTAGTAGCCCTCATCGAGCCCGTATGTGCTAACTCGTTGTTCTCC GCGCATCGGTGAGGAGGAACTTGATGT
back to top

Coding sequence (CDS) from alignment at Scaffold_3:184769..199145+

>EsuBft1095_6a-0001 ID=EsuBft1095_6a-0001|Name=EsuBft1095_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1164bp|location=Sequence derived from alignment at Scaffold_3:184769..199145+ (Ectocarpus subulatus male Bft15b)
ATGAAGGTTTTCGGTTCCTCCCTTATCGCTGCCTTGGCAAACCGGCGGTC
GACGCTTATCAACGGCGCCGTGGGATTTTCGACGTTCGCCGTGGGGGATG
CATTGTCCCAGGGCGCTCGGCCCCAGTCCCAGCTCGTAGTGGCTGGGTGG
AGACGGCAGCATCAGTCGGAGGAGTCATCCTGGCAGCAGCAGTTCATCGA
CAGGACGAGAGGAGTGGACTACGCCCGTAGCGCCAAGGTCGGGCTGTTGG
GCATCATGCTCAACGGCTTCGCCCTCGGGGCTTGGTACCGTGTCCTCGAC
CGCTACATCGGCTCTGACAGGACACGCTTCCAGCAGATCCTGAAGAAGCT
GGTGGTCGACCAGATGGTGTACGCCCCGTTCTCGATCACCAGCTTCGTCG
GCTACGCGGCCGTGCTTAACGGCGGCGGCCCTGCCAAGGTAGTGGACGAG
ACCAAAAAGAACCTAGGGGAGACCTTCTGGTCAATCTGGCTCACCGATTG
GAAGGTCTGGCCGGCCGCCAACCTCTTCATGTTTAGGTTCATCCCTTCCT
CCTACCGGCCGTCCTTCGCCAGCATGGTGCAAGTGGCGTGGCAGGCCTAC
CTGTCGAGCGTCAGCTACGACAGCCCACATCACTACCACCACCACCACCA
CCACCAGAAGACCCCGGTCGCCACCATTCAGGCCGGGGTCGCCATCGAGG
CCGACGGCGGCAGCAGCGGCGCGGTACTTGTCAGGGGGGGGGAGGCAGGG
AAAGACCTCGCGGGCAAGGCGGCGGCAGCCGTGGCCGCCGTCGCCAAAAC
TGGGGGAGAAGATGAGAGCGTACCATCCCCTGGGGTTCCGGTGGGGAGTA
ACGCCATCGCTGGCGCTGGAACGCCACGAGTGGCGGTGGATAGACGGGCA
ACCGGCCGTTACGCTTACACGTCTTCCGTCTCCTCCTTCACTAATACCCT
TGGCAGTCATGCTTGCACCAGCGGCGGAATGGCAGTCGAGGGTGGCGATA
TAAGTAGCGGCGCCAAGAGCGCCCGCCCGCAAGGGTATGGCGCGCTTCTC
AACGGCGGCGGCGGGGGTGGTGGTGGTGGTGGTCGGGTGCAGGCGGTGGC
GGTGACGAAAGGGTCATCTTCTTCTTCTTCTTCTTCCCTGGTGGCCAAAG
CCAAGGAGTTGTAG
back to top