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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FX40 |
| ProteomeId | EsuBft1093_5 |
| Protein domains | PTHR12154 |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | TMhelix |
| Protein domains | IPR013969 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | G3DSA |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | udp-n-acetylglucosamine transferase subunit alg14 homolog os:rattus norvegicus gn:alg14 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1382 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 1.93e-107 |
| EggNOG OGs | KOG3339@1|root,KOG3339@2759|Eukaryota |
| Ec32 ortholog description | beta(1,4)-N-acetylglucosaminyltransferase |
| Ec32 ortholog | Ec-10_004190.2 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | ALG14 |
| KEGG ko | ko:K01363,ko:K07441 |
| KEGG Reaction | R05970 |
| KEGG Pathway | ko00510,ko00513,ko01100,ko04140,ko04142,ko04210,ko04612,ko04621,ko04924,map00510,map00513,map01100,map04140,map04142,map04210,map04612,map04621,map04924 |
| KEGG Module | M00055 |
| GOs | GO:0003674,GO:0003824,GO:0004577,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007154,GO:0007267,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0023052,GO:0030154,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032502,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043495,GO:0043541,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045165,GO:0045168,GO:0046331,GO:0048869,GO:0070085,GO:0071704,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 |
| EC | 2.4.1.141,3.4.22.1 |
| Description | dolichol-linked oligosaccharide biosynthetic process |
| COG category | S |
| CAZy | GT1 |
| BRITE | ko00000,ko00001,ko00002,ko00536,ko01000,ko01002,ko01003,ko03110,ko04147 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0006488 |
| GO | 0018279 |
| GO | 0005783 |
| GO | 0043687 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1093_5a-0001 ID=EsuBft1093_5a-0001|Name=EsuBft1093_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1382bp|location=Sequence derived from alignment at Scaffold_133:371356..380594- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCCGCCGCCCCACCAAGTCCGTGTGCGTTGATGAATGGTGGTGGCGCGTG TTGTGGGGACTGCTCTCCTGCTGCTGGCATGGCGCGTGTGGGCAATAATT CCGCGACGGTGGCGTCAATGGCCGGCGCAGCAACGCGCGCAATCGCCACA GCAGCAAACTAGCACATCGTCTTCAGCAGGCAGGCCAGGCCGGAAGGTCA ACACGCTAGTCGTTCTGGGTTCGGGTGGACACACCTCCGAGATGCTGAAG CTGACCTCACGCCTCTCGCCGGAGACATACTCCCCGCTCTGCTACGTCGT GGCGAGCACAGACCACACCAGCGCAGACCGCATCCCGAAAGAGGGACTGA TGTCAGGTCGCTCCAGGGTACTCACGATACCTCGCAGCCGTGAGGTGGGG CAGTCATACCTGACGTCGGTCTTCACGACGTTGTTGGCCGGTCTGCATGC CGCCGTCGTGGTGGTCACAGTTCGTCCAGACCTCGTTCTTGTTAACGGTC CCGGGACGTGCATTCCAGTGTGCGTTGCCGCGTCCGCCCTGCGCTTCTTC GGGTTGGGGTCGAGCTGCTCCCGCACCGTGTTCTGCGAGAGTTTTTGCCG GGTGAAGTCTCTGAGCCTGAGCGGTCGCATCATGTATCTGTTGGCCGATC GGTTCGTGGTTCACTGGCCGGAGCTCCTCGTGAAGTACCCCCGCGCGGAG TACGCCGGGCAGCTCATGTAAACAATTTGCTTTGTTTTCGTGCCGGAAGT CTGGCCCCTTGGCAGCTTTTTGGCCGTTGCCACCCGGTGAGAAGTTTTTC AAGGAGAGCAACCGTTGCAGAGTAGATGCGCTCCTTGGACTTTCTTAGTT TTGCAGATTTTTGCGTTCGGTAAAGTAGTCTGCCAGTTGTTTTTCGCAGA GCGAATGCTTGACCGCGTGATTCGCATGCTTTGCACGGTCTTCCAGTGTG TGGTGCTCTCGTGAGGTTGGTTTTCTTGTACATATCGCCGACTCGGTTGT CGGTACATGTGGTGTGGTGTAATGCAACGTCTTTCCGTTACGTTGGGGAA GTGGCGGTGTCGTGTGCATGTGCTGCGTATGATGAAACGCTATGCCGTCC GTACGTTAGGGTGAACGACGACGCACGTCGGTGCGTGTGAACAAATTGTG AATCGATCTCATATCTCCTTTGTTCGGGATAAATGTTTTATTGCTTGAGA CTACGTTTTCGCTAGAATAAACCAGATTGGTGCCTGCCTAAGTGGGCCCA TAAATAATTTTGCCCATCGCGTCACGATCGTGGAGAAATAGTGGGCGTTG TCGCAAAGGACTTGCGCCAAAGGGATCGCGGGGTCTCCCAAAGCTACTTC CGTGTACAGGTCAGAACGGATTCCACTGTGAA back to topprotein sequence of EsuBft1093_5a-0001 >EsuBft1093_5 ID=EsuBft1093_5|Name=EsuBft1093_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=228bp
MVVARVVGTALLLLAWRVWAIIPRRWRQWPAQQRAQSPQQQTSTSSSAGR PGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRI PKEGLMSGRSRVLTIPRSREVGQSYLTSVFTTLLAGLHAAVVVVTVRPDL VLVNGPGTCIPVCVAASALRFFGLGSSCSRTVFCESFCRVKSLSLSGRIM YLLADRFVVHWPELLVKYPRAEYAGQLM back to topmRNA from alignment at Scaffold_133:371356..380594- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1093_5a-0001 ID=EsuBft1093_5a-0001|Name=EsuBft1093_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=9239bp|location=Sequence derived from alignment at Scaffold_133:371356..380594- (Ectocarpus subulatus male Bft15b) GCCGCCGCCCCACCAAGTCCGTGTGCGTTGATGAATGGTGGTGGCGCGTG
TTGTGGGGACTGCTCTCCTGCTGCTGGCATGGCGCGTGTGGGCAATAATT
CCGCGACGGTGGCGTCAATGGCCGGCGCAGCAACGCGCGCAATCGCCACA
GCAGCAAACTAGCACATCGTCTTCAGCAGGCAGGCCAGGCCGGAAGGTCA
ACACGCTAGTCGTTCTGGGTTCGGGTGAGTGCGGCCAAGTGGCTACTGTC
CTGTGTTCGTTGATGACATACGGCATGTACTTAATTGCCGAACGGGATGC
CGCCAAGTCGTCGGGAAAGCCGCTGTCTGTTGAGCTGGATAATATCTGCA
CATTTACCTCGCACAGACGGACGCAAGTTGCCACTTTTTGAATCGCGCAA
CTCTTTTGAGTGAAGAACTCTCTCGCTCCCCTCCTCCTGCTGTAGCCCTC
CCCGCTAAGCCTGAACCAAACCCACATGTTACTCAACCCCTGAGGAAATA
GCACCCTGCAGTAGATCGCTTAATAGTTTTGCAGGTCTGTGCGCTCTTCT
GCCCCATTTATGTCTGCCCTCGATGTTCTGGACTCCTCCCCTACCCCGTA
GCAGCCGGTAGAAGACCTCTCCCCTGCCCGTAACACAGCAGTGCGTCCTG
AGCCTGCGCGTGTCTTGTAAGTACGCCTAACAATCGTCAGTGATGAATAC
GCTCCTTCCACAGACATAAAATACGTTTCGCCAACGTACCCCCTTCACCA
GCAACAACGCGCAAACAACATGGGACACGCAGAACAAGAGAGCAGTCCAC
GCAACCTCACTTGCACCAACCAGGCACCTTCGAGCACCTCCAGTTCTTGT
CTGTCCTCCATTCCGTGACCCCTTCTCCCGGTACTGCCTCTTGAAGTGTC
ACGTGCGCTTCTGACGCTCGGGTATTTTGCAAGTGGCCGCGAAAAACATC
ACGGGGGTCTCGGGGGCACAGACTGGTGGTGGTTACCGTTTGCCCTTGGA
TGGATGTGTCGATTCAGTCTCGCTTTGCTGGAAGCTTTCCGACGAAGCAG
TAGTAGCCTGTCGCGTCGAAAGCTCTCGGATATTCAGCGCAGGATCCCGA
GGGTTTTTCCACGTGACAGACTTGAGGAAGTGGTCGGTCGAACCTATATC
TATCGCACTTACGTGCAGCTCTGGGGTCTGCGTGCTCCCCCTATCTAACA
GGATGTAGTCGAGGATTGAGTATTCATTGCAAACTGCCCGTTGCCTGGTG
AACTCCGGCTTATCGCATTCCCTCCTCGTTGCTCCCCAAGAATTCAAGCA
TCCTCACGCCGTTGTCATTCACTTTATCTTCTCCGTGCTGCCCGATCGCC
TGTCCTCTACTGGAAGCTTTCCCTACTCTGGAGTTGAAATCGCCCACCAT
GACAACTTCTCCCTTCCTACTGAACCTCTGGACATCTTCCCCAATTTGTC
CAAAGTTCTCCTGCGCCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGTTGATCACAGTGCCTCTAGTACCGGCAC
GGTCCCAGGAAGAGTCGCGGCGTGAGGTTCAGGTCGAACAGCCGGGATTT
CACATCCGCTGGGGAAGAGGCATCATCTTGGTCAGCTTGTGGCAGAGAGA
TGTTGTTCCTGTCGCAGTCAGTCCAGTCACCATCGACCATCGCCGCTGCC
GCCAAACGACAGAACCTATGGTTCGCCCCCGTCTCCCTGTGATCTTAAGG
GGATGAAGGACCTCAAGAAGGAACACGTGTCGAGTCCTACTTACTCCTAG
AAGGTATCAATGGTGTTCTCGTCTCTCCGTGGGCTGCTGCATATACCAAG
AGAAGTGATGCTTCAATATCATTTCTCTCTTGTGCTTCTGTGTCCGCTAG
CCTTTTTGTTTGGTCACCGACGTGTCTGCTGACGAGGTTCGATGAACAAG
TGGTATCTGGTAGTCAGCAAATGATTTTCAAAGCACGGCTGTTTCGATCC
AACCCTTTGCTCTCTGTACCAAGAGGGAGCTTTAGCCAGGAACCACAGTC
GGGAACCACCACGCGAGATGGTACACCGCCGGTGTCGAGAACACTGGTGT
TTTTTCAGAACGCTAGTTAAGAGAGGGAACGCTTCACCAGGACCCCTTAC
TTGTTGTTCTTTCTGCATTAAAGCCAAGAATTATCCTAGTGTCGGTGGAC
GAGGTCAGGTCATTTTTATTGTCCGGCTGTTCGACCCTGCCATTGTCCCT
CTGTACAAACCAAGAGCAGGCTTTTGCCAGGGAAAGCAGTAGGGCAGTCG
GAATCCGTCATGAGCGATGCTATACCGCGGCGGGTGTCGGAGACACTGGC
CTTTATCAGGACGCCAACTCTTGTTGTTCGTTTGACCGCGTGATCTGATC
GTATTGATCTATTGATACTTTGATTCCAAAGGTACGAGCCGAAATAAAAT
CACAAGTCCGTATACGGGAGCACCTCGTCCCTATTTTTTTCGCAACTCAC
GGAGGCGATAGCACACACGTTGACACCTTGTTCGGAGAAAGCAAGACTTC
TAACGAACTTATCGGTGTTCATCCTTGATGTATTTCATCCACTGGTCGCT
TTTTTTCTTCAGACGGTCTGAAGAAGCAAACAGTGGGTGAAATACACGAA
GACGGAACACGGAAAGGATCGTTCCAAGTCTTGTTTTCTCCGAAAAAGGT
GCCACGTGTATTCGGAACTCGAAGTACATCACGTTCTTCTTGCTTTTTTT
TCCTTTCACGCCCGTGCGCGGACCCCGATCTATTCGACAATCCGCAACCT
TACGATATCGCAGAAAGAACGGAGCGCGCTTTTGGCCAACGGGTACACCT
GGTCGGTGTTCAACCCATCCTGAACTTTGCCTGAATGGTTTCCCCGTGCT
GCTTGGAGGTAGAGGCACGAAGGGCGCGTCGGTAGCTGGAACTCTGCGTA
CCTACCCGAATTCGTCACGCTTGTTGGACGTTTTCCATCCCTCCCTTACC
CCCCGACGCTTGTCGTCCATGCCCCAAGGTGGACACACCTCCGAGATGCT
GAAGCTGACCTCACGCCTCTCGCCGGAGACATACTCCCCGCTCTGCTACG
TCGTGGCGAGCACAGACCACACCAGCGCAGACCGCATCCCGAAAGAGGGA
CTGATGTCAGGTCGCTCCAGGGTACTCACGATACCTCGCAGCCGTGAGGT
AATGATCGTTCTAGGACATGCTTGTACATTTTGTGTTGGCGAGAACGGGT
GGCGTGAGATGTTCAACTGCTGCATGCCCTACCAGAAACGAGGCAAGGGA
GCCTGGTATTTGCAAGAGTCAGTTGCAGTAGAAAGGAAGAGCAACGGTTT
TGCGCCTGCGACTTGTGATTCTTGTTGTTTGGTGCACTGTCCTGCAGCAG
CATTCTCCATTTCACCGTTTGTTTCGATCACCTCGACGCAGCGGCAGCAC
AGGTCCCCTGTAGAAAAACACATGGGAGTGGCGCTAGGTTTGCGGTCCGT
TCGTCACACAACATGCTCCCGTTTTCCGACTTAGATCGCCGCCTCGGTGG
TTCGTCCGTACCATGGTGTCCAATGTCTCGATAGGACTGTCCCAGTGGCG
CCTCTGGAACGTTGTGGGTATTTGTAGAACATCGTTGGCTGCTCGTCCCA
CAAAGTGGGAACGCGTCTTGTCCTCGTGCGCCGATGAATTGGTCGTGGAT
GTTTTCGACGAAGTGCAACATCGATTAGAGTAATACCCGGAGAAACCGCT
CTAATTTGGATGGCCTCATAGGTAGCATGTCTGCCTGCTCTGCCAGGGAC
CCTACCGCACACTGCTGTGCAAGATCTACCTTAATTTGTGTACTGTCTGG
CAGAGAGGCAGAATCGGTCAACCTGATCAGCCTGTTCAACTTGCAACGTT
CAGACAAGTTCGTTACGATTCATCCTTCAACCTTTCTGCCCTACAGTTTG
TCAATTTTCTTTTTCGTTCTTCACGCTCATCTCCCAATGCGCCAAGTCCG
GTCCTTGTCGCAGGTGGGGCAGTCATACCTGACGTCGGTCTTCACGACGT
TGTTGGCCGGTCTGCATGCCGCCGTCGTGGTGGTCACAGTTCGTCCAGAC
CTCGTTCTTGTTAACGGTCCCGGTGAGGTTACTCCCTTGGCAGACGTACG
TTCGACATGCCTAAGCATGTGCGTTGATGCTGTTTCATCGAACGAAGGCT
TGGGAGACCTTTTCCTTGCTGGTGCTCCTTGTTTCTGCGAACCACGCCCC
CCTCGTCCTGCGGCGGTGCCAGACTTTATTTCCATGCTAACGGCGCGATG
GATCCTTCCCCACGCCACACGGGTTGCCGTAACGTTCGTGCATACTGGTA
GAAGTAGCAGGTTATGGAAGCATCGAGCTAACTTAACAAGCATCTGTCGG
GGAGAGTGTCCGTCCTAGCAATCACGTGGTAGTCGGAATTGTTTCTCGAG
GGCCCATGCATTTATCATGCGACTACCTCCTCCCCTGCGATACCCCCCCC
GACACAACAGGGACGTGCATTCCAGTGTGCGTTGCCGCGTCCGCCCTGCG
CTTCTTCGGGTTGGGGTCGAGCTGCTCCCGCACCGTGTTCTGCGAGAGTT
TTTGCCGGGTGAAGTCTCTGAGCCTGAGCGGTCGCATCATGTATCTGTTG
GCCGATCGGTTCGTGGTTCACTGGCCGGAGCTCCTCGTGAAGTACCCCCG
CGCGGAGTACGCCGGGCAGCTCATGTAAACAATTTGCTTTGTTTTCGTGC
CGGAAGTCTGGCCCCTTGGCAGCTTTTTGGCCGTTGCCACCCGGTGAGAA
GTTTTTCAAGGAGAGCAACCGTTGCAGAGTAGATGCGCTCCTTGGACTTT
CTTAGTTTTGCAGATTTTTGCGTTCGGTAAAGTAGTCTGCCAGTTGTTTT
TCGCAGAGCGAATGCTTGACCGCGTGATTCGCATGCTTTGCACGGTCTTC
CAGTGTGTGGTGCTCTCGTGAGGTTGGTTTTCTTGTACATATCGCCGACT
CGGTTGTCGGTACATGTGGTGTGGTGTAATGCAACGTCTTTCCGTTACGT
TGGGGAAGTGGCGGTGTCGTGTGCATGTGCTGCGTATGATGAAACGCTAT
GCCGTCCGTACGTTAGGGTGAACGACGACGCACGTCGGTGCGTGTGAACA
AATTGTGAATCGATCTCATATCTCCTTTGTTCGGGATAAATGTTTTATTG
CTTGAGACTACGTTTTCGCTAGAATAAACCAGATTGGTGCCTGCCTAAGT
GGGCCCATAAATAATTTTGCCCATCGCGTCACGATCGTGGAGAAATAGTG
GGCGTTGTCGCAAAGGACTTGCGCCAAAGGGATCGCGGGGTCTCCCAAAG
CTACTTCCGTGTACAGGTCAGAACGGATTCCACTGTGAA back to topCoding sequence (CDS) from alignment at Scaffold_133:371356..380594- >EsuBft1093_5a-0001 ID=EsuBft1093_5a-0001|Name=EsuBft1093_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=687bp|location=Sequence derived from alignment at Scaffold_133:371356..380594- (Ectocarpus subulatus male Bft15b) ATGGTGGTGGCGCGTGTTGTGGGGACTGCTCTCCTGCTGCTGGCATGGCG CGTGTGGGCAATAATTCCGCGACGGTGGCGTCAATGGCCGGCGCAGCAAC GCGCGCAATCGCCACAGCAGCAAACTAGCACATCGTCTTCAGCAGGCAGG CCAGGCCGGAAGGTCAACACGCTAGTCGTTCTGGGTTCGGGTGGACACAC CTCCGAGATGCTGAAGCTGACCTCACGCCTCTCGCCGGAGACATACTCCC CGCTCTGCTACGTCGTGGCGAGCACAGACCACACCAGCGCAGACCGCATC CCGAAAGAGGGACTGATGTCAGGTCGCTCCAGGGTACTCACGATACCTCG CAGCCGTGAGGTGGGGCAGTCATACCTGACGTCGGTCTTCACGACGTTGT TGGCCGGTCTGCATGCCGCCGTCGTGGTGGTCACAGTTCGTCCAGACCTC GTTCTTGTTAACGGTCCCGGGACGTGCATTCCAGTGTGCGTTGCCGCGTC CGCCCTGCGCTTCTTCGGGTTGGGGTCGAGCTGCTCCCGCACCGTGTTCT GCGAGAGTTTTTGCCGGGTGAAGTCTCTGAGCCTGAGCGGTCGCATCATG TATCTGTTGGCCGATCGGTTCGTGGTTCACTGGCCGGAGCTCCTCGTGAA GTACCCCCGCGCGGAGTACGCCGGGCAGCTCATGTAA back to top
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