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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft1092_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 230 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1092_2a-0001 ID=EsuBft1092_2a-0001|Name=EsuBft1092_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2308bp|location=Sequence derived from alignment at Scaffold_140:100964..106007+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGATATCACCTTGCACTTCAAAGTGATCACAGCATCAACAACTCC GGTGATAGCGGACCTCGTCGAAGAGCTTCAGGCTGCAGGCATTATCGTGA ACAGGGCGAAGAGCTCGGCACTCCCTCCGCCAGGACACGAGGTCACTCAA GAAGAGCAAAGGCTCCTGGGTGAAGCAGGTCTCCCAATCGCAGAGGAAGG CATCACCGTGGTAGGCGTCCCTATCGGGACAGATGACCTCGTCAAGAGCT TCGCCGCGGACGTGATCACCAAAAGGCGGAGCAGCGGGGCCTGTGAACGG CTGGACAATCTTGTCATGTGCGTCCTCGAAGCGGGAATGGGGCTCAGAAA CGCCGAGGACGAAGACCAACTCTTCGACGACGACGACCAGCCAGGCCGAT TTAAGATACGGCCCTATCAACAAGCCCAGGCGCGTTTGTCTACGGGGGCT GGAGGATTGGGATTACCAGCGACAGTTGTTCGAAGGTTCTCAGCTTCTAT TGGCAACCTTGTCAGCACCTTACCCACCGTTATCGCCACTCTGAGAGGCC CGTTGGGAGAATCGGTGAAAACCAAGATACCGAACACCGTCTTGGTGGAG CGGATGGGGGATGCGCTAAAGGAGGTCCACACGGAGTTCGGGCTGTCGGA GGACGTATTGAAGGGGGTGGTGCCGCCATCTTGGGTGGAATGGGCCCTAG AACAGACGGGAGAGACCGGACGACGGAGGCCCACAGTGGCGGAGCTAGCA GCCCACGACGGAGAATCCACTACGCCCAAGAAAGCCCAACACAAATTGGG CAAAGCCATGAACAAAAAGCAACTCGAGAGGTTCATGGAGTCCCTGGACC AGCTGTCTCAAGAAGCGGTCCCGCCCACACAAGAAAGCCCATACGGAGGA AGGGAGTCTAAGAGCATGGCCTTGGCGAGAGTGAGGAGCTCTCAAGGAAA AGGAGCACAAGCTTGGTTGAGAGCGGCCCCTACTGACCATGCTCGGGAGA TTCCTCCTGACGAATTCGTCTACGCCATCAGACGCACCCTGGGAGTCGAG GAACTCTTGGCAACAGGATGTCCTAGATGCCACAGAGGCAGGGAATACAA TACCATCACAACGGTGCATGCACGGACCTGTCCGAGGGATGGAGCGCAGA TCCGCAAGCACAAGTACACTTGCGAAATGGCAGCGCGACCAGCGATGGAA CCGCCGCCCAAGCCTCCGAGGCGCGAAAGCGTCAGCACTACGCTCGGCCA GGACACGTGTCCTTTTGACGAGCGCAGCTATAAACTTACCACCTTCGCGG TGGAAAGCTTTGGCCGCCTTGGAGAGGAGGGTTACGAATTCATCGACGAA CTAGCGACGCACGCTGCAGGAGGGAGGCATGGAGGAACGATGACCCAGAA AGGAGTCTACAAGGAGAGGCTACTTCTGGTCGTTTCGGTGGCTACGCAGG TGGCCATATCAAGGAGGGTATAGTTGTTACAAACATTTGGTAGGTACATC ACACGTACTAAAAGAAATGTCGTTTTAGTAGTAGATTATGTTCACAAGAT TTCGGTTCAACGACAGGAACTTCTTGTCAGAGTTTTGGAGAGACAAGGTT TTGGCATTTTCACAAAGGAAGTAAAAGGAGAACGGAGGAAATGTTGAATT CAATCAATAATGTTATGATTTCCTTCAGATTTAAGTTCGGCATTGGTAGG TTTTGAACCCAACCCGGGGATGTCATCGTTTTGTCCCCGGTCGACCTGTG TGTGTGTTTTTTTATTGTCAGCAATGACCGCGCTAACCGGCTGAACAATT AAAAGACATCAGTGCCAACGGGTTCCCTCAGAAGCGCTGGTCGCGGGGGT GCAAAGGTGTTTTGAAACTACAGTAGTTTTCGGTGATAATTCTTACCGTA GCGGCAAGCCTAAAATCAGGAAAAAAATATCCTTGACCTTTATTAATCAT CAGGTGTGCTCCAATGGGCGTGGAATTGTGCGTACAGTCGAAACATGCTC TGTAGAACGTCGTGTGGTTCGTACCCTATTTGATGGTGACGTTCGTGCGT TCCAGTACCTGTGGGGGGAGGCATGCACGGGTTTAGACCGAAAACCCGGG GACGCGGTGGTTCTGTCCCCGGGGTGGCGTGTTTTTTTTGTTCTGAACAT GTTTCTCACTCATGTTTAAAGATCCCCTCCAAAGGTTGTGTCGTGGGGAT GAATGAGTATTCCTCAGTGGTGGATACATTTGGCGGTGTTCGGCGTGAAT TCTTACCGTTGGTTAGCGGCATGCTAAATCAGGAAAAAGTACCCATCGTT GATCAAGC back to topprotein sequence of EsuBft1092_2a-0001 >EsuBft1092_2 ID=EsuBft1092_2|Name=EsuBft1092_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=490bp
MDDITLHFKVITASTTPVIADLVEELQAAGIIVNRAKSSALPPPGHEVTQ EEQRLLGEAGLPIAEEGITVVGVPIGTDDLVKSFAADVITKRRSSGACER LDNLVMCVLEAGMGLRNAEDEDQLFDDDDQPGRFKIRPYQQAQARLSTGA GGLGLPATVVRRFSASIGNLVSTLPTVIATLRGPLGESVKTKIPNTVLVE RMGDALKEVHTEFGLSEDVLKGVVPPSWVEWALEQTGETGRRRPTVAELA AHDGESTTPKKAQHKLGKAMNKKQLERFMESLDQLSQEAVPPTQESPYGG RESKSMALARVRSSQGKGAQAWLRAAPTDHAREIPPDEFVYAIRRTLGVE ELLATGCPRCHRGREYNTITTVHARTCPRDGAQIRKHKYTCEMAARPAME PPPKPPRRESVSTTLGQDTCPFDERSYKLTTFAVESFGRLGEEGYEFIDE LATHAAGGRHGGTMTQKGVYKERLLLVVSVATQVAISRRV back to topmRNA from alignment at Scaffold_140:100964..106007+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1092_2a-0001 ID=EsuBft1092_2a-0001|Name=EsuBft1092_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5044bp|location=Sequence derived from alignment at Scaffold_140:100964..106007+ (Ectocarpus subulatus male Bft15b) ATGGACGATATCACCTTGCACTTCAAAGTGATCACAGCATCAACAACTCC
GGTGATAGCGGACCTCGTCGAAGAGCTTCAGGCTGCAGGCATTATCGTGA
ACAGGGCGAAGAGCTCGGCACTCCCTCCGCCAGGACACGAGGTCACTCAA
GAAGAGCAAAGGCTCCTGGGTGAAGCAGGTCTCCCAATCGCAGAGGAAGG
CATCACCGTGGTAGGCGTCCCTATCGGGACAGATGACCTCGTCAAGAGCT
TCGCCGCGGACGTGATCACCAAAAGGCGGAGCAGGTAAACTGGCCCGTAT
GCTCGCATGTATGCCAGACGAACAAGTGGCCCACCTGATCACGTCTATGT
CGCTCGTCCAACGATCGGCATACATCGAGCGCGGTATCGATCACACACTG
GTCAGCGGGGCCTGTGAACGGCTGGACAATCTTGTCATGTGCGTCCTCGA
AGCGGGAATGGGGCTCAGAAACGCCGAGGACGAAGACCAACTCTTCGACG
ACGACGACCAGCCAGGCCGATTTAAGATACGGCCCTATCAACAAGCCCAG
GCGCGTTTGTCTACGGGGGCTGGAGGATTGGGATTACCAGCGACAGTTGT
TCGAAGGTTCTCAGCTTCTATTGGCAACCTTGTCAGCACCTTACCCACCG
TTATCGCCACTCTGAGAGGCCCGTTGGGAGAATCGGTGAAAACCAAGATA
CCGAACACCGTCTTGGTGGAGCGGATGGGGGATGCGCTAAAGGAGGTCCA
CACGGAGTTCGGGCTGTCGGAGGACGTATTGAAGGGGGTGGTGCCGCCAT
CTTGGGTGGAATGGGCCCTAGAACAGACGGGAGAGACCGGACGACGGAGG
CCCACAGTGGCGGAGCTAGCAGCCCACGACGGAGAATCCACTACGCCCAA
GAAAGCCCAACACAAATTGGGCAAAGCCATGAACAAAAAGCAACTCGAGA
GGTTCATGGAGTCCCTGGACCAGCTGTCTCAAGAAGCGGTCCCGCCCACA
CAAGAAAGCCCATACGGAGGAAGGGAGTCTAAGAGCATGGCCTTGGCGAG
AGTGAGGAGCTCTCAAGGAAAAGGAGCACAAGCTTGGTTGAGAGCGGCCC
CTACTGACCATGCTCGGGAGATTCCTCCTGACGAATTCGTCTACGCCATC
AGACGCACCCTGGGAGTCGAGGAACTCTTGGCAACAGGATGTCCTAGATG
CCACAGAGGCAGGGAATACAATACCATCACAACGGTGCATGCACGGACCT
GTCCGAGGGATGGAGCGCAGGTGAATATGCATGAACCTCTGAAGTATGCA
CTATCAAGAGCCTTATCGGGTCTGGGGGTGAAACACGAGGTGGAAACCGG
GGCGCCTTTCACAGGAGAGAGGAACCTCAGCATGGACATCGTGATCAGGC
CAGGAGTCCTGGCAAACGCATCATCTTCAGCGTACCGTCACAAAGGAATA
CTCCTCGATGTGACGCACGCAGATCCGCAAGCACAAGTACACTTGCGAAA
TGGCAGCGCGACCAGCGATGGAACCGCCGCCCAAGCCTCCGAGGCGCGAA
AGCGTCAGCACTACGCTCGGCCAGGACACGTGTCCTTTTGACGAGCGCAG
CTATAAACTTACCACCTTCGCGGTGGAAAGCTTTGGCCGCCTTGGAGAGG
AGGGTTACGAATTCATCGACGAACTAGCGACGCACGCTGCAGGAGGGAGG
CATGGAGGAACGATGACCCAGAAAGGAGTCTACAAGGAGAGGCTACTTCT
GGTCGTTTCGGTGGCTACGCAGGTGGCCATATCAAGGAGGGTACAAAGAT
ACAAGCTCGCACTACGTGGACGACAAGAAGCGGAGGACCAACGAACAAGA
TCGACACCGAACGCATCGACACCATTGATTTGGGGATGTAGTGTCGATGC
ACTGTAATAGTAAGAATGTAATGGATTATCTTATGAGCGTAGGTATAGTT
GTTACAAAGCATTTGGTAGGTACATCACACGTACTAAAAGAAATGTCGTT
TTAGTAGTAGATTATGTTCACAAGATTTCGGTTCAACGACAGGAACTTCT
TGTCAGAGTTTTGGAGAGACAAGGTTTTTTTGGCATTTTCACAAAGGAAG
TAACAGGAGAACGAACGGAGGAAATGTGGGCACCACATGTCAGTATATAG
TCTAAGGCTTGGGGCACCTTATCTCGTGTCGCGCAAACACCCTTTGTACA
GTGGCGTCAGCGGCAGGATGTCATCCCTGCAATGTCAGAGTTCCGGGTTC
GACTCCGGGCACGTGTAAATGGGTTTTTTGTCCGCCGCCAGCCGGTCGGG
TTCCGGTTACCGTACATGCTACGGGGGGTGCGTCGTCGTGGTACTCACGT
ATTTGTCTACGATGCTGAGCTGTCCGCTCGCTCGTATCCGGGGGGGTATG
TGGGTACCACATGTCAGTATATAAGGCTTGGGGCACTTTATCTCGTGTCG
GGCAAACACCCTTTTTACTGGATTATCTTATGAGCGCAGGTATAGTTGTT
ACAAACATTTGGTAGGTACATCACACGTACTAAAAGAAATGTCGTTTTAG
TAGTAGATTATGTTCACAAGATTTCGGTTCAACGACAGGAACTTCTTGTC
AGAGTTTTGGAGAGACAAGGTTTTGGCATTTTCACAAAGGAAGTAAAAGG
AGAACGGAGGAAATGTTGAATTCAATCAATAATGTTATGATTTCCTTCAG
ATTTAAGTTCGGCATTGGTAGGTACGTACTAACATGACGTGCTTGACAAT
ATCGTATTCGTGCAAGTATGAGCATGAAGATAGAAATGGTAAGGGGTATG
CATTGAGGGAAACGTTTTAGGACTTAAGTGCTAACATCTTCAATTGTCGG
AGGGCAATAATAATAATAATATAATAATGGATGCCTATCATTTACATATG
TCGGGATCGGGGGGGGGCGTGAGGCGAGCGGGTGCAGGAGGGAGGCGGGG
GCCGCGGTGTTGGTCGTGGAGACGGGGTGGGAGCGCGTGGCCGGGGGGGG
GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCTGTTAAACCGTTATGGCTACGCTTTAAGAGAGTAT
TCCTTTAAACCATACCTCATTTAAGAGAATATTACCTTATACCGTAGCCA
ACTCGAAAGGTCGTGGAACACTGACACCCTGACGCCCACTCCAGCAGTAA
ATATGTGCCGTCACAGCGAATGGAGGGCCTATCATTTACGTATGTATGTC
GGGACGGGAGGGGGGCGTGAGACCGGCGCGGGAGGGAGGTGGGAGCCGCG
GTGTTGGTCGTGGAGACGGGGTGGGAGCGCGTGGCCGGGGGAGGGGGCGC
GACCGGGTGGGGGGGCACGACCGGGTGGCTGGAGCAGAAGGGACGACTTT
GTCGGAACGCCAACCAGCGCCCTCCGTGTCCAGGATCGGACGACAACGGA
CGCCGACACCCGTTGTCGACGTGTAGCCGTATGGATATTTCTCACGTGTC
CTGACAGGTTCAGATTTGAATCGAATACGCCCAAATGGTCATGAAGTTGT
ACCCGCAGTCGATATGCACCCTGTAGGACGTCGCATGTGGTTCGTAGGCC
ATGCGACGGTGATTTTAGGGCGTGCCAGCACCGGGGGGGCAGGGTGCGCA
GGTTTTGAACCCAACCCGGGGATGTCATCGTTTTGTCCCCGGTCGACCTG
TGTGTGTGTTTTTTTATTGTCAGCAATGACCGCGCTAACCGGCTGAACAA
TTAAAAGACATCAGTGCCAACGGGTAAAATTCAAGGTCCCTAGTCTAGAA
GGAGGCCAAAATTCGAAAAATGCGCAATGCGCTTGATGCGAATGCCAATA
CGACTCTCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGG
AAGCCACTGATGCAAAGAGCGGAGGACAGCAAAAGGGTTATTTCAAGCCC
AGCCGAAGCCAGGATATCGTGATATGCCGAATCTCCCAATTTGATAATCG
TACACTCCCAAGATCCAACAGTCCTCGTGTCAGCAGCTAGATGATTCAAA
CAACATAGCAACACATATACGGCCGTGTGTGTGTTTTGCGATAGATGTTT
TTCACAGGTTCCCTCAGAAGCGCTGGTCGCGGGGGTGCAAAGGTGTTTTG
AAACTACAGTAGTTTTCGGTGATAATTCTTACCGTAGCGGCAAGCCTAAA
ATCAGGAAAAAAATATCCTTGACCTTTATTAATCATCAGGTGTGCTCCAA
TGGGCGTGGAATTGTGCGTACAGTCGAAACATGCTCTGTAGAACGTCGTG
TGGTTCGTACCCTATTTGATGGTGACGTTCGTGCGTTCCAGTACCTGTGG
GGGGAGGCATGCACGGGTTTAGACCGAAAACCCGGGGACGCGGTGGTTCT
GTCCCCGGGGTGGCGTGTTTTTTTTGTTCTGAACATGTTTCTCACTCATG
TTTAAAGATCCCCTCCAAAGGTTGTGTCGTGGGGATGAATGAGTATTCCT
CAGTGGTGGATACATTTGGCGGTGTTCGGCGTGAATTCTTACCGTTGGTT
AGCGGCATGCTAAATCAGGAAAAAGTACCCATCGTTGATCAAGC back to topCoding sequence (CDS) from alignment at Scaffold_140:100964..106007+ >EsuBft1092_2a-0001 ID=EsuBft1092_2a-0001|Name=EsuBft1092_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1473bp|location=Sequence derived from alignment at Scaffold_140:100964..106007+ (Ectocarpus subulatus male Bft15b) ATGGACGATATCACCTTGCACTTCAAAGTGATCACAGCATCAACAACTCC GGTGATAGCGGACCTCGTCGAAGAGCTTCAGGCTGCAGGCATTATCGTGA ACAGGGCGAAGAGCTCGGCACTCCCTCCGCCAGGACACGAGGTCACTCAA GAAGAGCAAAGGCTCCTGGGTGAAGCAGGTCTCCCAATCGCAGAGGAAGG CATCACCGTGGTAGGCGTCCCTATCGGGACAGATGACCTCGTCAAGAGCT TCGCCGCGGACGTGATCACCAAAAGGCGGAGCAGCGGGGCCTGTGAACGG CTGGACAATCTTGTCATGTGCGTCCTCGAAGCGGGAATGGGGCTCAGAAA CGCCGAGGACGAAGACCAACTCTTCGACGACGACGACCAGCCAGGCCGAT TTAAGATACGGCCCTATCAACAAGCCCAGGCGCGTTTGTCTACGGGGGCT GGAGGATTGGGATTACCAGCGACAGTTGTTCGAAGGTTCTCAGCTTCTAT TGGCAACCTTGTCAGCACCTTACCCACCGTTATCGCCACTCTGAGAGGCC CGTTGGGAGAATCGGTGAAAACCAAGATACCGAACACCGTCTTGGTGGAG CGGATGGGGGATGCGCTAAAGGAGGTCCACACGGAGTTCGGGCTGTCGGA GGACGTATTGAAGGGGGTGGTGCCGCCATCTTGGGTGGAATGGGCCCTAG AACAGACGGGAGAGACCGGACGACGGAGGCCCACAGTGGCGGAGCTAGCA GCCCACGACGGAGAATCCACTACGCCCAAGAAAGCCCAACACAAATTGGG CAAAGCCATGAACAAAAAGCAACTCGAGAGGTTCATGGAGTCCCTGGACC AGCTGTCTCAAGAAGCGGTCCCGCCCACACAAGAAAGCCCATACGGAGGA AGGGAGTCTAAGAGCATGGCCTTGGCGAGAGTGAGGAGCTCTCAAGGAAA AGGAGCACAAGCTTGGTTGAGAGCGGCCCCTACTGACCATGCTCGGGAGA TTCCTCCTGACGAATTCGTCTACGCCATCAGACGCACCCTGGGAGTCGAG GAACTCTTGGCAACAGGATGTCCTAGATGCCACAGAGGCAGGGAATACAA TACCATCACAACGGTGCATGCACGGACCTGTCCGAGGGATGGAGCGCAGA TCCGCAAGCACAAGTACACTTGCGAAATGGCAGCGCGACCAGCGATGGAA CCGCCGCCCAAGCCTCCGAGGCGCGAAAGCGTCAGCACTACGCTCGGCCA GGACACGTGTCCTTTTGACGAGCGCAGCTATAAACTTACCACCTTCGCGG TGGAAAGCTTTGGCCGCCTTGGAGAGGAGGGTTACGAATTCATCGACGAA CTAGCGACGCACGCTGCAGGAGGGAGGCATGGAGGAACGATGACCCAGAA AGGAGTCTACAAGGAGAGGCTACTTCTGGTCGTTTCGGTGGCTACGCAGG TGGCCATATCAAGGAGGGTATAG back to top
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