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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft1090_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 240 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1090_6a-0001 ID=EsuBft1090_6a-0001|Name=EsuBft1090_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2409bp|location=Sequence derived from alignment at Scaffold_586:25816..31400+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCACCACGAGCCATCCCCACACTCCACCCAGGGAGCCGAAGACGAA GAGGGACGCCGCCCTGGACAACTTCGGGCTAGGCTCGGACGACGAGGACA CCTCTCGCCTCAAACTCCCCGAACGCAGCGACATCGGCATCTGGACCAAA GGACAGGAGGATGACGAGCCGGGTAGCACATGCAGGGGCGGTAAGCGGCA AAAACTGCCGTGGGCCAAGAGGCTCAAGAAGGCCATAACCTACGACACGG ACATAAAAATCGATCTCGGAGGCCACCTCTCCGACCTGGTGCAGGGTGTT GCGATCGAATACGACCACCGGAAGATAGGTCAGGAGCTGAACGAGCTCGG GGCCGAGTATGCGGAGGGAAAGAGTGGTCATCCCCTGGAGGAGAGATCCC TGTTCACGCTCACGGGCAAGGCGGGCAAGGCAGGGCTCACGACGGAGCAT CGTCTCTCGATTGCTGCAGCGAGATCGAAGCCGGAGTTGGGACGGTTCAT CGCCGACATCGAACGCTCTGCACCCGCGGGCCTTAAGAACGAGACGGTAC AGGTCCGTATGATGCCCAGATCTACGGGTGTTGGCATGACCGCCCACAGA GATGGCATCGCTCTGAGCTACGACAGAGTGGTCTTCACGATCCACACGGA GTATACCGCAGCCCCCGCACAATTCTTCTGCAAGCTCATGTCGACAGCAG ACGCCAGGCCGGATCGGGGCCCATACGAAAAGGAACAGCGAAACATCCAA AAAGTCAACGGTCTTGTACTGGTCCAGGGTCCGAAGGCTCGGGGTGAAGA AACACGAGTCGTTCACGGCGTCACAGGCGGGGGCGGAGGGGCGATCACGG CCATACTGGACTATGCGACGTCTAGAATCGATGAGAGTCCTGTGACAGAG GCGGACCGCGACCATGCTCGGAAATCGGTGGTGACGTCACTCGCTCGCGA TCCAGACCCGCCTCGACCTGTTGCCAACACCTACGCGAACACCTGTGAAT TCCCGGCGGACGCCCCGCGTTCATCTGGTTCGCGCAGGGGGACGGAAGCC AACAATGCCATGGTACCGAACGGAAGGGGGGGATTGGAGAAGAGGGCGGT GCAAAAAGGCGCGGCCGGAACGCTCTACGGCCGCGAAAAGGGGGGCGACG GCAGATCGCTCTCTTCGGAACAAGGAGCTTCTATTCGCCCCGCCGACACC TCGGCGCAGTGGACGGAACACGCTGTCGAAGAACCCCTCAGGGCAGAGCC AGCAACGTGCTCCAACTGTGAAGAGCCCAGAGAGCTTTCGTGGTTCTTCT ACGGTGGAGGGACGCGCAGAGTGGTGGTACTGGACCACAAGGTTGGCCTA CACAGATGCAACAAGTACGCCATCAAACCCCGTGGCGTGTTCAAGCCTAC CGACGAGAAGGTGAAAACGATCACCAAGGATGGCATCCGCAAGGCAGTCA GGAGGGAGGCGAAGCGGGGGGCCAAAAAGGCGTCGGGGGGCAACTAGTTC AGGGGGGTGGCAGGTGTTGCCCTGTCGACAGTTGAGACAGATGGGTCGCG CGTTTTGATCGCCGGTAGCCTGCGAGAGTTGGTCACGACGATGTGTCCAC ACTTTGGTGGCGTGTTATATACGGGGGCTGGCCACATCCTTCCTGGGTAG ACGGGAGACCATTCAGTTTTTTCTGTTCCCTCGGGCGATTGAAACGACGC GGTTTGCCACCGGGCAACACCACCTTTTTTGGCGTACTTGTATATTGGAT GTTGGCGGTGTGAAGTGTGGATTTAGCAAGGAAAATGGTCGGCAGCGCGT GTTGCCGTAGAACCATCCGCCCCGTCATTTCTGCTCCGGAGGTGTGGCAG AGAGAGATTTTTTTTCGTTTTCCATCATCCTTTGCTCCGTTGCATATATA GTTTTAGTCAGCAGATCCGGCGTTCATATGTCCTCACTCGGATGTGGTTT TGAAGGTGGCTTTACCATCACCACCCGTTTGAAGGTGGGTGTTAGGAGGT CACACGCGATTGATTACAGGTTTTAGGAGGTCACACGCGAGAGCATTATT ATTATAGCCTTGGGCGGTGTGTTTTATCGGGTGCCGTGTGTTCCTCATTA TGTTTTGTTCCAGAAGAGCACGATTTTGACAATTCGATGCGAAAGATGTT GTGTCACAGACTCTCACAGAAGCAGCATTTGTTGCTACGAAACAATGAAA CCGCGATCAAGGTACGAGTAGAGAACAGGTGTTTCTCCCGGGGCGGTAGT CGTAGTCAATAATAGGACGTGTTTGAACATTTTGTTTCGTACACGAGACA TAGGTGGTGGCGGTGGGAAGCTTTGTTGAACACCTGCGTGAAAATCTTGT GTGACAATCGAAATTTAGTTGAACATTGTGTGAAACTTTGTGTGTGCGTG TGTTTTTAT back to topprotein sequence of EsuBft1090_6a-0001 >EsuBft1090_6 ID=EsuBft1090_6|Name=EsuBft1090_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=498bp
MATTSHPHTPPREPKTKRDAALDNFGLGSDDEDTSRLKLPERSDIGIWTK GQEDDEPGSTCRGGKRQKLPWAKRLKKAITYDTDIKIDLGGHLSDLVQGV AIEYDHRKIGQELNELGAEYAEGKSGHPLEERSLFTLTGKAGKAGLTTEH RLSIAAARSKPELGRFIADIERSAPAGLKNETVQVRMMPRSTGVGMTAHR DGIALSYDRVVFTIHTEYTAAPAQFFCKLMSTADARPDRGPYEKEQRNIQ KVNGLVLVQGPKARGEETRVVHGVTGGGGGAITAILDYATSRIDESPVTE ADRDHARKSVVTSLARDPDPPRPVANTYANTCEFPADAPRSSGSRRGTEA NNAMVPNGRGGLEKRAVQKGAAGTLYGREKGGDGRSLSSEQGASIRPADT SAQWTEHAVEEPLRAEPATCSNCEEPRELSWFFYGGGTRRVVVLDHKVGL HRCNKYAIKPRGVFKPTDEKVKTITKDGIRKAVRREAKRGAKKASGGN back to topmRNA from alignment at Scaffold_586:25816..31400+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1090_6a-0001 ID=EsuBft1090_6a-0001|Name=EsuBft1090_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5585bp|location=Sequence derived from alignment at Scaffold_586:25816..31400+ (Ectocarpus subulatus male Bft15b) ATGGCCACCACGAGCCATCCCCACACTCCACCCAGGGAGCCGAAGACGAA
GAGGGACGCCGCCCTGGACAACTTCGGGCTAGGCTCGGACGACGAGGTAA
GACCATCAGTGTGGTGTGATACACACGTTTTCCTTTAGATTTCAGGTGTC
CATTCTGAACATGAACCCACAGTCACACACGCACACACACACACACAGAC
ACGATGATGCACCCTCTCCCCAGCCATGCATCCGTCCGTCCGTGATCCCA
CAGGACCTTCGCACTCCCCCAGGGGTGACGCGGAAAATGAGACCCAGGAC
ACCTCTCGCCTCAAACTCCCCGAACGCAGCGACATCGGCATCTGGACCAA
AGGTGAGATACGATCAGTTCCCACCCGAATTACGAATTTTGTTCCTCGTT
CATCCCTTCTACTGGAGCAATTATCCTCAACCAGACTCGATGTCACTTCA
CGACATCTTTGTGTTTATACTTTTATCGTACTATATGTGCGAATTAGCAA
CGATCCCCCCGCCGAATCCTACAACACGCCTCGGATCGGGTTTCCATTTC
GACGCTTCTTGAAATGAGATCACCGCCACCCCCTCCCCCCTTCGCCACAA
CCCTCCCTACCCTCCCCATTATATTTAGTCTCCTGCACCAATGGTACGTT
TGATGAAGTAAGTGTCATTGGTGGGATTAAATAGAACTACCGAACACGAA
AACAACGGTTTGTTCTGGTATACGTTCGATTCATCTATGTCGTGCTGGTT
AAAGTCGTTTGGTATTCGCTTCATGGTCATTCATTCTGTCCTGTGTTATT
TTGCCCGTTGTGAAATAACAGAGGGTGTCGACACTCAGAGGTGGTAGGAT
GTCGTCGCCCCCGCCGCCCAGAGAAATAGGACAGGAGGATGACGAGCCGG
GTAGCACATGCAGGGGCGGTAAGCGGCAAAAACTGCCGTGGGCCAAGAGG
CTCAAGAAGGCCATAACCTACGACACGGACATAAAAATCGATCTCGGAGG
CCACCTCTCCGACCTGGTGCAGGGTGTTGCGATCGAATACGACCACCGGA
AGATAGGTCAGGAGCTGAACGAGCTCGGGGCCGAGTATGCGGAGGGAAAG
AGTGGTCATCCCCTGGAGGAGAGATCCCTGTTCACGCTCACGGGCAAGGC
GGGCAAGGCAGGGCTCACGACGGAGCATCGTCTCTCGATTGCTGCAGCGA
GATCGAAGCCGGAGTTGGGACGGTTCATCGCCGACATCGAACGCTCTGCA
CCCGCGGGCCTTAAGAACGAGACGGTACAGGTCCGTATGATGCCCAGATC
TACGGGTGTTGGCATGACCGCCCACAGAGATGGCATCGCTCTGAGCTACG
ACAGAGTGGTCTTCACGATCCACACGGAGTATACCGCAGCCCCCGCACAA
TTCTTCTGCAAGCTCATGTCGACAGCAGACGCCAGGCCGGATCGGGGCCC
ATACGAAAAGGAACAGCGAAACATCCAAAAAGTCAACGGTCTTGTACTGG
TCCAGGGTCCGAAGGCTCGGGGTGAAGAAACACGAGTCGTTCACGGCGTC
ACAGGCGGGGGCGGAGGGGCGATCACGGCCATACTGGACTATGCGACGTC
TAGAATCGATGAGAGTCCTGTGACAGAGGCGGACCGCGACCATGCTCGGA
AATCGGTGGTGACGTCACTCGCTCGCGATCCAGACCCGCCTCGACCTGTT
GCCAACACCTACGCGAACACCTGTGAATTCCCGGCGGACGCCCCGCGTTC
ATCTGGTTCGCGCAGGGGGACGGAAGCCAACAATGCCATGGTACCGAACG
GAAGGGGGGGATTGGAGAAGAGGGCGGTGCAAAAAGGTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTGTTGTTGTTGTTGTTGTTGTTGTCCACATTACAAGCCGCC
TCCCTGGCAAAACCCCCTCCTCGCACGTCGGTGCTACAAACGCATGCCTC
TTAATACGGAGTCATTTGCTGTATGGAATGAATTATATGAATGAACGAGT
GAGTGGGTGAAATTGTGCTTGTGTGTTGTCGTGTGTCCTACGTCCTTGTC
CCAGTGCACCCGGCCTTCTCGTTTTTTTTCATGTATGTCTGGTTGGGTAA
CTACTGTACGATACCTCTGTTGTTGTTGTTGTTGCTTATGCCGCCAAAGC
GTACTATTATTTGACTTTTGGAATGAAAATTTGACAGTCGATCGAACAGA
ACGCGGTGCCTTAAGAGCGAGCAACTGGTGCATGGTTGGATTGAGCCTCT
TCCCCCCGCCCGTCGTGTTCGTTGCAGGCGTTTCTGTTCGTGTCGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TTTTGGCTCATGGGGGGGGGTAGCTTCCGCCCCCGTCTTTCGTCGTGTGC
CCCGCGCCCCATGTGCTCACCGCATCTCCGCTCTCTCTTTGTGATGCTAC
CAAGGCGTGTGATTTTGACCCTTTGAATGAAGCTGTGTGACCTCTGGGCC
GAAGATTCGATTGTCAGCTTATCGTTGCCTCTGTTGTTGTTGTTGTTGTT
GTTATTGTTGTTGCTGTTGTTGTTGTTGTTAATTCATAGGAAATGGTGAC
AAACCGGTCTCATTCATTCATTCCTAACTTCGTAAACCCTCCAGCTCACA
ACGACTGAATGGCTCGCAGTTTCCCACCTTCGCTCATCTTTTTTTCTTTT
GGTCTTGCACGGTTCGTCTACTATCTCCATGCAGGCGCGGCCGGAACGCT
CTACGGCCGCGAAAAGGGGGGCGACGGCAGATCGCTCTCTTCGGAACAAG
GAGCTTCTATTCGCCCCGCCGACACCTCGGCGCAGTGGACGGAACACGCT
GTCGAAGAACCCCTCAGGGCAGAGCCAGCAACGTGCTCCAACTGTGAAGA
GCCCAGAGAGCTTTCGTGGTTCTTCTACGGTGGAGGGACGCGCAGAGTGG
TGGTACTGGACCACAAGGTTGGCCTACACAGATGCAACAAGTACGCCATC
AAACCCCGTGGCGTGTTCAAGCCTACCGACGAGAAGGTGAAAACGATCAC
CAAGGATGGCATCCGCAAGGCAGTCAGGAGGGAGGCGAAGCGGGGGGCCA
AAAAGGCGTCGGGGGGCAACTAGTTCAGGGGGGTGGCAGGTGTTGCCCTG
TCGACAGTTGAGACAGATGGGTCGCGCGTTTTGATCGCCGGTAGCCTGCG
AGAGTTGGTCACGACGATGTGTCCACACTTTGGTGGCGTGTTATATACGG
GGGCTGGCCACATCCTTCCTGGGTAGACGGGAGACCATTCAGTTTTTTCT
GTTCCCTCGGGCGATTGAAACGACGCGGTTTGCCACCGGGCAACACCACC
TTTTTTGGCGTACTTGTATATTGGATGTTGGCGGTGTGAAGTGTGGATTT
AGCAAGGAAAATGGTCGGCAGCGCGTGTTGCCGTAGAACCATCCGCCCCG
TCATTTCTGCTCCGGAGGTGTGGCAGAGAGAGATTTTTTTTCGTTTTCCA
TCATCCTTTGCTCCGTTGCATATATAGTTTTAGTCAGCAGATCCGGCGTT
CATATGTCCTCACTCGGATGTGGTTTTGAAGGTGGCTTTACCATCACCAC
CCGTTTGAAGGTGGGTGTTAGGAGGTCACACGCGATTGATTACAGGTTTT
AGGAGGTCACACGCGAGAGCATTATTATTATAGCCTTGGGCGGTGTGTTT
TATCGGGTGCCGTGTGTTCCTCATTATGTTTTGTTCCAGAAGAGCACGAT
TTTGACAATTCGATGCGAAAGATGTTGTGTCACAGACTCTCACAGAAGCA
GCATTTGTTGCTACGAAACAATGAAACCGCGATCAAGGTACGAGTAGAGA
ACAGGTGTTTCTCCCGGGGCGGTAGTCGTAGTCAATAATAGGACGTGTTT
GAACATTTTGTTTCGTACACGAGACATAGGTGGTGGCGGTGGGAAGCTTT
GTTGAACACCTGCGTGAAAATCTTGTGTGACAATCGAAATTTAGTTGAAC
ATTGTGTGAAACTTTGTGTGTGCGTGTGTTTTTAT back to topCoding sequence (CDS) from alignment at Scaffold_586:25816..31400+ >EsuBft1090_6a-0001 ID=EsuBft1090_6a-0001|Name=EsuBft1090_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1497bp|location=Sequence derived from alignment at Scaffold_586:25816..31400+ (Ectocarpus subulatus male Bft15b) ATGGCCACCACGAGCCATCCCCACACTCCACCCAGGGAGCCGAAGACGAA GAGGGACGCCGCCCTGGACAACTTCGGGCTAGGCTCGGACGACGAGGACA CCTCTCGCCTCAAACTCCCCGAACGCAGCGACATCGGCATCTGGACCAAA GGACAGGAGGATGACGAGCCGGGTAGCACATGCAGGGGCGGTAAGCGGCA AAAACTGCCGTGGGCCAAGAGGCTCAAGAAGGCCATAACCTACGACACGG ACATAAAAATCGATCTCGGAGGCCACCTCTCCGACCTGGTGCAGGGTGTT GCGATCGAATACGACCACCGGAAGATAGGTCAGGAGCTGAACGAGCTCGG GGCCGAGTATGCGGAGGGAAAGAGTGGTCATCCCCTGGAGGAGAGATCCC TGTTCACGCTCACGGGCAAGGCGGGCAAGGCAGGGCTCACGACGGAGCAT CGTCTCTCGATTGCTGCAGCGAGATCGAAGCCGGAGTTGGGACGGTTCAT CGCCGACATCGAACGCTCTGCACCCGCGGGCCTTAAGAACGAGACGGTAC AGGTCCGTATGATGCCCAGATCTACGGGTGTTGGCATGACCGCCCACAGA GATGGCATCGCTCTGAGCTACGACAGAGTGGTCTTCACGATCCACACGGA GTATACCGCAGCCCCCGCACAATTCTTCTGCAAGCTCATGTCGACAGCAG ACGCCAGGCCGGATCGGGGCCCATACGAAAAGGAACAGCGAAACATCCAA AAAGTCAACGGTCTTGTACTGGTCCAGGGTCCGAAGGCTCGGGGTGAAGA AACACGAGTCGTTCACGGCGTCACAGGCGGGGGCGGAGGGGCGATCACGG CCATACTGGACTATGCGACGTCTAGAATCGATGAGAGTCCTGTGACAGAG GCGGACCGCGACCATGCTCGGAAATCGGTGGTGACGTCACTCGCTCGCGA TCCAGACCCGCCTCGACCTGTTGCCAACACCTACGCGAACACCTGTGAAT TCCCGGCGGACGCCCCGCGTTCATCTGGTTCGCGCAGGGGGACGGAAGCC AACAATGCCATGGTACCGAACGGAAGGGGGGGATTGGAGAAGAGGGCGGT GCAAAAAGGCGCGGCCGGAACGCTCTACGGCCGCGAAAAGGGGGGCGACG GCAGATCGCTCTCTTCGGAACAAGGAGCTTCTATTCGCCCCGCCGACACC TCGGCGCAGTGGACGGAACACGCTGTCGAAGAACCCCTCAGGGCAGAGCC AGCAACGTGCTCCAACTGTGAAGAGCCCAGAGAGCTTTCGTGGTTCTTCT ACGGTGGAGGGACGCGCAGAGTGGTGGTACTGGACCACAAGGTTGGCCTA CACAGATGCAACAAGTACGCCATCAAACCCCGTGGCGTGTTCAAGCCTAC CGACGAGAAGGTGAAAACGATCACCAAGGATGGCATCCGCAAGGCAGTCA GGAGGGAGGCGAAGCGGGGGGCCAAAAAGGCGTCGGGGGGCAACTAG back to top
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