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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft107_15 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 157 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft107_15a-0001 ID=EsuBft107_15a-0001|Name=EsuBft107_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1572bp|location=Sequence derived from alignment at Scaffold_17:188201..191305- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACCGATCTTCATCAGGTCGCGAAGTCCTTGAGAATCGGTACGGAATG
GGTCCTGGCGGTTCGCTGGTATAATAAGCAGGAGCGAGGCAGGGCCACTA
GCGTCGACGACGGGCGATGTGTCATCACCAAGAAGCAAGAGGATAGACTG
AACGAGTTCATCAAGGGCGAGCACGAGGCGGGACGTCAGGTCTTTCGCCG
AACCGTCATAGATTACTTGGAGTGTTCGTACGGATTAGAGATGTCGAATC
GTGCCGTGGGAGGGTTGCTGCAGTGCCTTGTCTTGAAGCGCCGTACGGGG
GGGATCAAAATACCTCCGTTGAACGAGGAGAGGAAAAACCGCATCCGTCT
CTTTCTTGTTGAGATGAACCTCGCGAAGAGGGTCGAGGACGCTGGGGTCG
CAGTCATTGTGTCCATAGATGAGAGCTTTGTTCACCACGCGCATGGTTCC
GCGTACTCGTGTTACTTTCCTTCTGACGATAAGGGGGTCGTGCAGGATGG
GATAGGCCGTACAACGGGGAAAGGTTTGCGTATATTCATGGTGGATGCAA
TCACGGTGCACAGGCCCTCGGCCGAGCTAAAGGAGGGATTTCCTATCCGT
GAGGGTTGGTTCAAGGCTAAAGAAAATCGTGCGAAGAAGATGAAGCCTGC
GGAGGCGGATTTCGAAACGTCAGATGAGCAGACAGCAGAACTTCTGTGGC
AGGCCAAGTTGGCAACTGGAAATCATCATAACGCCATGATGGATGGGATG
TTCATGCAGTGGTTGAAGCACCGACTTACCCTGGCCTTCGATGCGCAGTT
CAAGAACAACAAGATGTTTCTCGTTCTCGATAGCGCCTCATACCACCACT
ACTTTGACGAGGAGCTCAAGGTGCCCAAAACCAACAGTAAGAAGTACAAC
GTCGAACTCTTGCGTAAGTACGGTTGCAGGTCGTTCAAGGTGACGCGTGA
ATCGAAGGGTAAGGCTGCTGAGGACAACTTCGAGGTGCCGGTGCAGGGGT
TGTTATCCAATGCGAACCGCAAGAACAGCGTCAGCAAAGTAGAGATAGCC
TCCGTCACTCGGACGTACTTCAGAAAGAATTTCCCACAACAGCTCGAGGA
AAAGGCTGAGACGTACATGAGGGAGAAGGGGTTGGGAGGGGGGGCGGGGG
GTGTACTCATAGTCGTGCATGCCGTAGTCATGAGACCATTGACCTCGCAT
CCCTGCAAAGCCGGGACGGAGCACGCCGGGTTCTCACTGGACCAGGCTCT
CACATCGCCAAGCGCGAAGCGCCGTGAGGGGCGGGACATGTTGGATATCT
CGAAGCAAATCCGTCTCGGTTGGTATGGAGAACCGGAATGGGACGGTCAG
GAGGGAGGGTGGAAGGCAGCCAATTGTGGGAAGTTGGAGCATGCTATTTA
CAAGATGAACAAGTGGATCGGCCTGTATGGTGGAAACCTGAGCGGTACGA
TAGATGGCCTGGAGTATTCAGTGGCAGATTACCAAGAGGCTATGGCCGAG
GATGAGATAGAGGATGGGGTGGAGGAGCAGACGGATGAGTGGCTGGGTGA
GGACGCGGAAGATGCCATTTAG back to topprotein sequence of EsuBft107_15a-0001 >EsuBft107_15 ID=EsuBft107_15|Name=EsuBft107_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=523bp
MTDLHQVAKSLRIGTEWVLAVRWYNKQERGRATSVDDGRCVITKKQEDRL
NEFIKGEHEAGRQVFRRTVIDYLECSYGLEMSNRAVGGLLQCLVLKRRTG
GIKIPPLNEERKNRIRLFLVEMNLAKRVEDAGVAVIVSIDESFVHHAHGS
AYSCYFPSDDKGVVQDGIGRTTGKGLRIFMVDAITVHRPSAELKEGFPIR
EGWFKAKENRAKKMKPAEADFETSDEQTAELLWQAKLATGNHHNAMMDGM
FMQWLKHRLTLAFDAQFKNNKMFLVLDSASYHHYFDEELKVPKTNSKKYN
VELLRKYGCRSFKVTRESKGKAAEDNFEVPVQGLLSNANRKNSVSKVEIA
SVTRTYFRKNFPQQLEEKAETYMREKGLGGGAGGVLIVVHAVVMRPLTSH
PCKAGTEHAGFSLDQALTSPSAKRREGRDMLDISKQIRLGWYGEPEWDGQ
EGGWKAANCGKLEHAIYKMNKWIGLYGGNLSGTIDGLEYSVADYQEAMAE
DEIEDGVEEQTDEWLGEDAEDAI back to topmRNA from alignment at Scaffold_17:188201..191305- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft107_15a-0001 ID=EsuBft107_15a-0001|Name=EsuBft107_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3105bp|location=Sequence derived from alignment at Scaffold_17:188201..191305- (Ectocarpus subulatus male Bft15b)
ATGACCGATCTTCATCAGGTCGCGAAGTCCTTGAGAATCGGTACGGAATG
GGTCCTGGCGGTTCGCTGGTATAATAAGCAGGAGCGAGGCAGGGCCACTA
GCGTCGACGACGGGCGATGTGTCATCACCAAGAAGCAAGAGGATAGACTG
AACGAGTTCATCAAGGGCGAGCACGAGGCGGGACGTCAGGTCTTTCGCCG
AACCGTCATAGATTACTTGGAGTGTTCGTACGGATTAGAGATGTCGAATC
GTGCCGTGGGAGGGTTGCTGCAGTGCCTTGTCTTGAAGCGCCGTACGGGG
GGGTGTACTTATAGTCGTGCATGCCGTAGTCGTGAGACCATTGACCTCGC
ATCCTTACAAAGCCGGGACGGAGCACGCCGGGTTCCCACCGGACCAGGCT
CAGGCGCTCACATCACCAAGCGCGAAGCGCCGTGAGACATTCGGCGAGTC
GCATGAAGGATGCGCTGCATCCTGCTAAGGGTTTTCGGCATCTTGTGCTT
ACTTCCTTGCGTACGGATGACAGCTGCGTATGACTCANGTCGTTAGACCA
TTGACCTCGCATCCTTACAAAGCCGGGACGGAGCACGCCGGGTTCCCACC
GGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGATATTCGGCG
AGTCGCATGAAGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
ATTTTCTGGTGCTTTCACTTCCTGAGACAGTTGCAAGCACTATGTAACTG
CCTGGAGGGTGCTTGACCACTTTCACACAACGTGGTGCGATCATTCCCCT
TGCGCGATGTGAGGGTTATCCACTCCGCACAACATGATCTACTCGACCAC
CATTATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAACCCAATCCCGATGGCAAACACCGGGGGGGGC
GGCTTGTTTTACAACATCGTTGCCGGGTGACGAAAACCCAACCCCGATGG
CAAAACACCGGGAGGGGCGGCTTGTTTTACAACGTCGTTGCCAAGCGACG
AAAACCCAACCCCGATAGTAAAGACTGGGGGGGGAAGTAGGATCAAAATA
CCTCCGTTGAACGAGGAGAGGAAAAACCGCATCCGTCTCTTTCTTGTTGA
GATGAACCTCGCGAAGAGGGTCGAGGACGCTGGGGTCGCAGTCATTGTGT
CCATAGATGAGAGCTTTGTTCACCACGCGCATGGTTCCGCGTACTCGTGT
TACTTTCCTTCTGACGATAAGGGGGTCGTGCAGGATGGGATAGGCCGTAC
AACGGGGAAAGGTTTGCGTATATTCATGGTGGATGCAATCACGGTGCACA
GGCCCTCGGCCGAGCTAAAGGAGGGATTTCCTATCCGTGAGGGTTGGTTC
AAGGCTAAAGAAAATCGTGCGAAGAAGATGAAGCCTGCGGAGGCGGATTT
CGAAACGTCAGATGAGCAGACAGCAGAACTTCTGTGGCAGGCCAAGTTGG
CAACTGGAAATCATCATAACGCCATGATGGATGGGATGTTCATGCAGTGG
TTGAAGCACCGACTTACCCTGGCCTTCGATGCGCAGTTCAAGAACAACAA
GATGTTTCTCGTTCTCGATAGCGCCTCATACCACCACTACTTTGACGAGG
AGCTCAAGGTGCCCAAAACCAACAGTAAGAAGTACAACGTCGAACTCTTG
CGTAAGTACGGTTGCAGGTCGTTCAAGGTGACGCGTGAATCGAAGGGTAA
GGCTGCTGAGGACAACTTCGAGGTGCCGGTGCAGGGGTTGTTATCCAATG
CGAACCGCAAGAACAGCGTCAGCAAAGTAGAGATAGCCTCCGTCACTCGG
ACGTACTTCAGAAAGAATTTCCCACAACAGCTCGAGGAAAAGGCTGAGAC
GTACATGAGGGAGAAGGGGTTGGGAGGGGGGGCGGGGGGTGTACTCATAG
TCGTGCATGCCGTAGTCATGAGACCATTGACCTCGCATCCCTGCAAAGCC
GGGACGGAGCACGCCGGGTTCTCACTGGACCAGGCTCTCACATCGCCAAG
CGCGAAGCGCCGTGAGGTATTCGGCGAGTCGCATGAAGCGTGCGCTGCAT
CCTGCTAAGGGTGTTCGGCATCTTGTGCTTACTTCCGTGCGTGCGGATAA
CAGCTGCGTATGACTTAATATGTTTTCTGGTGCTTTCACTTCCAGACAGT
TGTAAGCACTGTGTAATTGTCTCAAGGGTGCTTGACCATTTTAACACAAC
GTGGTGCGATCATCCCCCTTGCGCGAAGTTAGGGTTGTCCACCCCGCACA
ACATGATCTACTCGACCACCATTCAGGGCCACCGCCAAAAAAAAAAACAG
AGGAAAACAAAATTGGGGTTGATTTTGACACCGCGGTACATGCCAACTTT
CCAGCCGATCGAGCTGTTCTGGCAGCACGGCAAGCATTAAATGAGCATTC
ATTTTGAGAAGGGGCGGGACATGTTGGATATCTCGAAGCAAATCCGTCTC
GGTTGGTATGGAGAACCGGAATGGGACGGTCAGGAGGGAGGGTGGAAGGC
AGCCAATTGTGGGAAGTTGGAGCATGCTATTTACAAGATGAACAAGTGGA
TCGGCCTGTATGGTGGAAACCTGAGCGGTACGATAGATGGCCTGGAGTAT
TCAGTGGCAGATTACCAAGAGGCTATGGCCGAGGATGAGATAGAGGATGG
GGTGGAGGAGCAGACGGATGAGTGGCTGGGTGAGGACGCGGAAGATGCCA
TTTAG back to topCoding sequence (CDS) from alignment at Scaffold_17:188201..191305- >EsuBft107_15a-0001 ID=EsuBft107_15a-0001|Name=EsuBft107_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1572bp|location=Sequence derived from alignment at Scaffold_17:188201..191305- (Ectocarpus subulatus male Bft15b)
ATGACCGATCTTCATCAGGTCGCGAAGTCCTTGAGAATCGGTACGGAATG
GGTCCTGGCGGTTCGCTGGTATAATAAGCAGGAGCGAGGCAGGGCCACTA
GCGTCGACGACGGGCGATGTGTCATCACCAAGAAGCAAGAGGATAGACTG
AACGAGTTCATCAAGGGCGAGCACGAGGCGGGACGTCAGGTCTTTCGCCG
AACCGTCATAGATTACTTGGAGTGTTCGTACGGATTAGAGATGTCGAATC
GTGCCGTGGGAGGGTTGCTGCAGTGCCTTGTCTTGAAGCGCCGTACGGGG
GGGATCAAAATACCTCCGTTGAACGAGGAGAGGAAAAACCGCATCCGTCT
CTTTCTTGTTGAGATGAACCTCGCGAAGAGGGTCGAGGACGCTGGGGTCG
CAGTCATTGTGTCCATAGATGAGAGCTTTGTTCACCACGCGCATGGTTCC
GCGTACTCGTGTTACTTTCCTTCTGACGATAAGGGGGTCGTGCAGGATGG
GATAGGCCGTACAACGGGGAAAGGTTTGCGTATATTCATGGTGGATGCAA
TCACGGTGCACAGGCCCTCGGCCGAGCTAAAGGAGGGATTTCCTATCCGT
GAGGGTTGGTTCAAGGCTAAAGAAAATCGTGCGAAGAAGATGAAGCCTGC
GGAGGCGGATTTCGAAACGTCAGATGAGCAGACAGCAGAACTTCTGTGGC
AGGCCAAGTTGGCAACTGGAAATCATCATAACGCCATGATGGATGGGATG
TTCATGCAGTGGTTGAAGCACCGACTTACCCTGGCCTTCGATGCGCAGTT
CAAGAACAACAAGATGTTTCTCGTTCTCGATAGCGCCTCATACCACCACT
ACTTTGACGAGGAGCTCAAGGTGCCCAAAACCAACAGTAAGAAGTACAAC
GTCGAACTCTTGCGTAAGTACGGTTGCAGGTCGTTCAAGGTGACGCGTGA
ATCGAAGGGTAAGGCTGCTGAGGACAACTTCGAGGTGCCGGTGCAGGGGT
TGTTATCCAATGCGAACCGCAAGAACAGCGTCAGCAAAGTAGAGATAGCC
TCCGTCACTCGGACGTACTTCAGAAAGAATTTCCCACAACAGCTCGAGGA
AAAGGCTGAGACGTACATGAGGGAGAAGGGGTTGGGAGGGGGGGCGGGGG
GTGTACTCATAGTCGTGCATGCCGTAGTCATGAGACCATTGACCTCGCAT
CCCTGCAAAGCCGGGACGGAGCACGCCGGGTTCTCACTGGACCAGGCTCT
CACATCGCCAAGCGCGAAGCGCCGTGAGGGGCGGGACATGTTGGATATCT
CGAAGCAAATCCGTCTCGGTTGGTATGGAGAACCGGAATGGGACGGTCAG
GAGGGAGGGTGGAAGGCAGCCAATTGTGGGAAGTTGGAGCATGCTATTTA
CAAGATGAACAAGTGGATCGGCCTGTATGGTGGAAACCTGAGCGGTACGA
TAGATGGCCTGGAGTATTCAGTGGCAGATTACCAAGAGGCTATGGCCGAG
GATGAGATAGAGGATGGGGTGGAGGAGCAGACGGATGAGTGGCTGGGTGA
GGACGCGGAAGATGCCATTTAG back to top
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