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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FLF6 |
| ProteomeId | EsuBft1076_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 238 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.38e-07 |
| EggNOG OGs | 2CMGX@1|root,2QQB8@2759|Eukaryota |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_004420.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1076_9a-0001 ID=EsuBft1076_9a-0001|Name=EsuBft1076_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2384bp|location=Sequence derived from alignment at Scaffold_211:133535..137739- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGAGCTCTCAGCTTCAAGCGTTGGCAAAGGTCCGTGGGATGCTAGA CTTTGTCCTCCACCCGTCTTCGCCTGACACGAGCGGTATACCCGTCGGAG ATGAGAAGCTGCGGAAGGTGATGGAGTGGGTCTTCAAGCGGGAAGATCCC ATTGACGGCGAACTGCTACCAGATGCGTGCCAGGTGTGTGCACCGCAGAG GAGCTTCTGGCCAAGGGCCTGTTTAAGGACAAGTTCACCCGCGACTCTCC TCAACGGAATCGAACCCGAAGATGGTGGGGGCGTGGGCACTCCGTTCGAG AGCGACGGCAACGGCGACTGCTTGTTGAATTCTGTGGCGGCATTCTTTGC CAAAGACGGAGGTCGAGGGGTCAGAAGTGCTGTGAAGACAATGGCGGTGA AGCTTCGAGTCAGCGTCGTGCTGTACGGGCTGAAATACATGGAGCTATTC CTACTGGAGCAGGACGAACATTTAGGGGCATGGTACAACTACACGTCAGA TGTACGGGAAAGGCTTGGGAAGAACGGGTGGGATGTGGCACCCGACCGCG GCAACAACTGGCACGTCGGGTCGTCAAAATGCGCGCGGCTGATGTTCCTT GCGCAGCTACGGAGCATAGCAAAGCCTGGGGACGTTGAGGCGAAAACGAA GGAGGCGGCCACGGCTTCAAAGGGGAAGCTAGCAGACGCGGTGCTTGGTC TAGAGCGGAAAGAAATGACGGAGGACGAGGAGGAGGATGTCATGCACAGG CTGACGCGCGCCCACACAAGGGCGTTCGCGACGCAAGCGGCTCGGATGGA AACCCTGGTGGCCGGGAAGAAGTGCGAAGGTTACATGACCGACTTGATAA CAAACAAGACGAAGTGGACGTTCTGCTGCCGGCCCACTGTCCTCACGCTA GGCATGGTTGCCACTCAGCGCACGGAAGGTTTATTCGGAGTGGCGAAGCG CTCGGGTGTCGAGAAGAAGCTTTCACTGTGCGCTCTTTGGGATCGCCTGC AACACCTGAGCAAGATGATTGCCATCGAGACAGCGAGGTTAGAGACCCCC CCAATCACCCCTGGGGTGGCGTTCCGGGACAAGCACGTCGAAGAATTCTT CCAGCCAGTGAAGCAAGAGCTTTTGGCCTGTGGTGCCAGCCAGTACTGCC AGAAAGTCGACGGATCGGAGTCGTATGACGTCGAACTGGTGACTTCCGGA AATGTGGACGAAGACGGACAACCGCTTCCTCTACACGACGACGACTTTGT CCAGATACGCAATTTGCGCCTCAAGCTCAACATTCTCCAGGTCGCACCAC CTGATACCGATCTGGAGAGAGACTCGCACTACTTCGCGGTTCTTGTCAAC CTCATCGGGAGAACTGGCGGGGAGGACGAGTTGAGCTTTACGCATGCCTT CGACGGTGCGTGTTTCCACAACCGTTGGCGTCAATCAGACGACGGAAAGG TTTTGCCATGGAGCGTCTCATTAGTGCTGTCGTCGTCAGGCCACGGCGAA GGATGGGACGGGCATCGCCAAGGATGCGATGCCCACTGCTGGGGACCGAC ATGCGATGAATCGTTCGATGGCGCACACCCCGCTGAACGTGCGGTGCGGG CCGCGCAGGATAGAAGCGCTGGCGACAAACGTCGCGTCTACGCCCATCTC ATGGCGAAGGGCAAGGAGAACGTAGGAGATATTATAAGGTCCGTACCCCT TCACCAAGCACTGTCCGTCCAGGTCAAGGTTGACAATTTCCTCGGGTATC TTCTGAAGGAGACCGCGGGAGACACAGGAGGACCCAAGAATCCTGGGCAA GCACCCACGAAAGGGAGACCTGAGAAGGACGGCAAAGAGGGAGCAGCTGG CAACCCTGCGGGCCAGCAAGGAAAATCCCGTCAGACTAGGAGGATGAGGG ACTTCAGCGACGTGCCAAGGACGAACAAGAGGAGAAAGCTGAAAGGTGCT GATACCAGCACCTAACCAGCTACCCTTGTCCCGTCGCTTCCACACGTGTT TACCTGACCAGTTATTTTCCGTCTTTTGCTTTTTTCATCGCTGTCCACGG TTGCGTGAGGACATGTTCGAGCGTCTGTGTTCAGGCAGACGGTATGGAAA CGGCCGGTATGAAAAACGGTGTGTACCTTAGTCTGACTTTCACGTCGCAT TGACGACCGGGAGGCAACACGTTCGTGGCGGCGAACATACGTTCATCACC TATGTCTCAAAATGTTTGGGATTGTTTGCGATCGTTTGCGAGTGTTTGCG TTGTCTTTGTTTTTTCTTCGTTGTTTTTTTTTTGAAGAGCGAGACCAAAC GAATGAGTCATCAATCCCTGATGTGATGAACGTTACATTTGGGCACGGTA CAATGTATAGACATAGCGATCACAGCAGGGGTGC back to topprotein sequence of EsuBft1076_9a-0001 >EsuBft1076_9 ID=EsuBft1076_9|Name=EsuBft1076_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=654bp
MSSSQLQALAKVRGMLDFVLHPSSPDTSGIPVGDEKLRKVMEWVFKREDP IDGELLPDACQVCAPQRSFWPRACLRTSSPATLLNGIEPEDGGGVGTPFE SDGNGDCLLNSVAAFFAKDGGRGVRSAVKTMAVKLRVSVVLYGLKYMELF LLEQDEHLGAWYNYTSDVRERLGKNGWDVAPDRGNNWHVGSSKCARLMFL AQLRSIAKPGDVEAKTKEAATASKGKLADAVLGLERKEMTEDEEEDVMHR LTRAHTRAFATQAARMETLVAGKKCEGYMTDLITNKTKWTFCCRPTVLTL GMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHLSKMIAIETARLETP PITPGVAFRDKHVEEFFQPVKQELLACGASQYCQKVDGSESYDVELVTSG NVDEDGQPLPLHDDDFVQIRNLRLKLNILQVAPPDTDLERDSHYFAVLVN LIGRTGGEDELSFTHAFDGACFHNRWRQSDDGKVLPWSVSLVLSSSGHGE GWDGHRQGCDAHCWGPTCDESFDGAHPAERAVRAAQDRSAGDKRRVYAHL MAKGKENVGDIIRSVPLHQALSVQVKVDNFLGYLLKETAGDTGGPKNPGQ APTKGRPEKDGKEGAAGNPAGQQGKSRQTRRMRDFSDVPRTNKRRKLKGA DTST back to topmRNA from alignment at Scaffold_211:133535..137739- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1076_9a-0001 ID=EsuBft1076_9a-0001|Name=EsuBft1076_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4205bp|location=Sequence derived from alignment at Scaffold_211:133535..137739- (Ectocarpus subulatus male Bft15b) ATGTCGAGCTCTCAGCTTCAAGCGTTGGCAAAGGTCCGTGGGATGCTAGA
CTTTGTCCTCCACCCGTCTTCGCCTGACACGAGCGGTATACCCGTCGGAG
ATGAGAAGCTGCGGAAGGTGATGGAGTGGGTCTTCAAGCGGGAAGATCCC
ATTGACGGCGAACTGCTACCAGATGCGTGCCAGGTGTGTGCGTAAGGTCG
GGTCCACAATCATTGACGCTCCATGCTCTCTTATCAACAAAACAGACTGC
TCACAATATTTTTTTTTTTTCCGAACGGAGTGTACGAAACACGTTCGAAA
CATGTTCTGACATGTTCCGTCACGATGTTGTTGTATGGGAGGTGGGGTAG
CAGCCTCGTATTGGAAGGATTAATGTGTGACCTGCCCGTAGCAGCATAGT
CGATCCCATGTACTGAATAGAGAGAGCTGTTTTCGCCCTGTTGTGCCATT
CGTGTTCCGTACGTGATCACTTCTATGTATAATGTACGTTCTCCGTTTCA
TAGAAACCCGGTTCCACCATCAGTTTCATAGCCATCATGTTTCTCAGCGT
TGCCGATCCGTGAAATTTATGTTTATCGCCGTAAATGCATCCTCCTTGAT
TCCCGTCCAGACCGCAGAGGAGCTTCTGGCCAAGGGCCTGTTTAAGGACA
AGTTCACCCGCGACTCTCCTCAACGGAATCGAACCCGAAGATGGTGGGGG
CGTGGGCACTCCGTTCGAGAGCGACGGCAACGGCGACTGCTTGTTGAATT
CTGTGGCGGCATTCTTTGCCAAAGACGGAGGTCGAGGGGTCAGAAGTGCT
GTGAAGACAATGGCGGTGAAGCTTCGAGTCAGCGTCGTGCTGTACGGGCT
GAAATACATGGAGCTATTCCTACTGGAGCAGGACGAACATTTAGGGGCAT
GGTACAACTACACGTCAGATGTACGGGAAAGGCTTGGGAAGAACGGGTGG
GATGTGGCACCCGACCGCGGCAACAACTGGCACGTCGGGTCGTCAAAATG
CGCGCGGCTGATGTTCCTTGCGCAGCTACGGAGCATAGCAAAGCCTGGGG
TATGGCTCCAACAGTTTGTCTTTCCAATACTCGCCACAGTCGTTCAATCT
CCCCTGCGAGTGTTTCTGCCATGTGAGTGTGTCTGGTGGAGGACTACGGT
AGATGCATTCTAGTTTGTATCACCGGTTTGATATCGCAGCAAGTCCATCC
GACACATCAGCTCATCGCCTCGCCGCAACACGCAGCAACACGCAGTGTAA
TTGTCCCGGTAGTAGGATCGTTGTTAGTTCTTTGGGTGCCTGCCGATGAC
CCGCCCAGTTTTCATGTACGAATTGGATGGGCGCCGCAATACCCGAAAGG
AAAACGAAAGGAAAACGGAAAACGGGAAAACGGGAAAACGGGTGGGTGAC
ACGCTCACGACACTTCCGTCATGTCTTGTTTGGGATTCATTTTGTGGCCG
CCTCCTCTCGCGCCCGGACTGTTGCAGTCAACTCCCTGAATGATGCTCAC
GGAGGGCCGTGAAAGCACACGCTGTTTCTGCCGTTGTGGGAAACGGCGCG
CAGGCCTTGCGCTCCACGTGGCCATGACCATGTGTTACAGCTCCAGCTAC
AACCCGCCCTTCGAGAATGCGAATGGATACCTAGAGTACGTGAGAAACAA
CCTTCCCGAGCTAAACAACTTCGTGACTTTTTCGGATGACAGCACCCTCG
TCGCGAAGGACCGCGCTATAACGAGATTCAGGACGTTGAGGCGAAAACGA
AGGAGGCGGCCACGGCTTCAAAGGGGAAGCTAGCAGACGCGGTGCTTGGT
CTAGAGCGGAAAGAAATGACGGAGGACGAGGAGGAGGATGTCATGCACAG
GCTGACGCGCGCCCACACAAGGGTAAGGACTCGGAGTGTTTCATCCATTT
GGGTTTGGCGGCAGGCGTTCGCGACGCAAGCGGCTCGGATGGAAACCCTG
GTGGCCGGGAAGAAGTGCGAAGGTTACATGACCGACTTGATAACGTGAGT
ATGTTCCAGCTGTTTAGTTGGGGGACATGCCTGCATTCGGTTGATGTGAT
GCGTTGAAGTATGATGGCCACGTCTCTACGCTCAAAATTCGCCAATTCGC
TATATTGTCGGCGCCGTTGATGTGCGCAGAAACAAGACGAAGTGGACGTT
CTGCTGCCGGCCCACTGTCCTCACGCTAGGCATGGTTGCCACTCAGCGCA
CGGAAGGTTTATTCGGAGTGGCGAAGCGCTCGGGTGTCGAGAAGAAGCTT
TCACTGTGCGCTCTTTGGGATCGCCTGCAACACCTGAGCAAGATGATTGC
CATCGAGACAGCGAGGTGCGAGGTGACTTTGTATGTTACCGATCCCTAGA
GGCTTCGCGTGCGAGGGGATCCCTAGTGGGTAAATTAGCTAGACGCTCAA
GGATAATGATGGTAGTTGACGTTATACATGAACCTCTCCCGTCGCTACGT
ATCATACACCTTATTTCATCCAGCACTCCGATGCATGCAGGTTAGAGACC
CCCCCAATCACCCCTGGGGTGGCGTTCCGGGACAAGCACGTCGAAGAATT
CTTCCAGCCAGTGAAGCAAGAGCTTTTGGCCTGTGGTGCCAGCCAGTACT
GCCAGAAAGTAAGGCGTGTTGGGGCATGTATTTGTACATAAGAAGCTGAA
TCGATGCTCTTGATTTCGGACAATTGTGTGCCCGTGACTTCTCGAGCTTG
ACCACAAACAGACATCGTCAAAGCCCAATCTAAACCCAAATAAACGCCGG
AATTCAGAGCTCAGGTCGACGGATCGGAGTCGTATGACGTCGAACTGGTG
ACTTCCGGAAATGTGGACGAAGACGGACAACCGCTTCCTCTACACGACGA
CGACTTTGTCCAGATACGCAATTTGCGCCTCAAGCTCAACATTCTCCAGG
TCGCACCACCTGATACCGATCTGGAGAGAGACTCGTTAGCTGACGAACCT
GCAGAGGACAACACCATGTGGGCTCGTAGATCGCTGCCAGCTTTCTTGGA
TTGATCGCCGGCTTCCCTATCGAACTGGTCGCGGCCGTTCGATGCAAGTA
TTCGGCGAACAATCCTAGCCACCTCGTCGCATTCGGGCCTCACAACGTCC
ATTTGTGTTCCTGTTTACAGCTTTTGCGGAGCGGACTGCCTTGCAGGCAC
TACTTCGCGGTTCTTGTCAACCTCATCGGGAGAACTGGCGGGGAGGACGA
GTTGAGCTTTACGCATGCCTTCGACGGTGCGTGTTTCCACAACCGTTGGC
GTCAATCAGACGACGGAAAGGTTTTGCCATGGAGCGTCTCATTAGTGCTG
TCGTCGTCAGGCCACGGCGAAGGATGGGACGGGCATCGCCAAGGATGCGA
TGCCCACTGCTGGGGACCGACATGCGATGAATCGTTCGATGGCGCACACC
CCGCTGAACGTGCGGTGCGGGCCGCGCAGGATAGAAGCGCTGGCGACAAA
CGTCGCGTCTACGCCCATCTCATGGCGAAGGGCAAGGAGAACGTAGGAGA
TATTATAAGGTCCGTACCCCTTCACCAAGCACTGTCCGTCCAGGTCAAGG
TTGACAATTTCCTCGGGTATCTTCTGAAGGAGACCGCGGGAGACACAGGA
GGACCCAAGAATCCTGGGCAAGCACCCACGAAAGGGAGACCTGAGAAGGA
CGGCAAAGAGGGAGCAGCTGGCAACCCTGCGGGCCAGCAAGGAAAATCCC
GTCAGACTAGGAGGATGAGGGACTTCAGCGACGTGCCAAGGACGAACAAG
AGGAGAAAGCTGAAAGGTGCTGATACCAGCACCTAACCAGCTACCCTTGT
CCCGTCGCTTCCACACGTGTTTACCTGACCAGTTATTTTCCGTCTTTTGC
TTTTTTCATCGCTGTCCACGGTTGCGTGAGGACATGTTCGAGCGTCTGTG
TTCAGGCAGACGGTATGGAAACGGCCGGTATGAAAAACGGTGTGTACCTT
AGTCTGACTTTCACGTCGCATTGACGACCGGGAGGCAACACGTTCGTGGC
GGCGAACATACGTTCATCACCTATGTCTCAAAATGTTTGGGATTGTTTGC
GATCGTTTGCGAGTGTTTGCGTTGTCTTTGTTTTTTCTTCGTTGTTTTTT
TTTTGAAGAGCGAGACCAAACGAATGAGTCATCAATCCCTGATGTGATGA
ACGTTACATTTGGGCACGGTACAATGTATAGACATAGCGATCACAGCAGG
GGTGC back to topCoding sequence (CDS) from alignment at Scaffold_211:133535..137739- >EsuBft1076_9a-0001 ID=EsuBft1076_9a-0001|Name=EsuBft1076_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1965bp|location=Sequence derived from alignment at Scaffold_211:133535..137739- (Ectocarpus subulatus male Bft15b) ATGTCGAGCTCTCAGCTTCAAGCGTTGGCAAAGGTCCGTGGGATGCTAGA CTTTGTCCTCCACCCGTCTTCGCCTGACACGAGCGGTATACCCGTCGGAG ATGAGAAGCTGCGGAAGGTGATGGAGTGGGTCTTCAAGCGGGAAGATCCC ATTGACGGCGAACTGCTACCAGATGCGTGCCAGGTGTGTGCACCGCAGAG GAGCTTCTGGCCAAGGGCCTGTTTAAGGACAAGTTCACCCGCGACTCTCC TCAACGGAATCGAACCCGAAGATGGTGGGGGCGTGGGCACTCCGTTCGAG AGCGACGGCAACGGCGACTGCTTGTTGAATTCTGTGGCGGCATTCTTTGC CAAAGACGGAGGTCGAGGGGTCAGAAGTGCTGTGAAGACAATGGCGGTGA AGCTTCGAGTCAGCGTCGTGCTGTACGGGCTGAAATACATGGAGCTATTC CTACTGGAGCAGGACGAACATTTAGGGGCATGGTACAACTACACGTCAGA TGTACGGGAAAGGCTTGGGAAGAACGGGTGGGATGTGGCACCCGACCGCG GCAACAACTGGCACGTCGGGTCGTCAAAATGCGCGCGGCTGATGTTCCTT GCGCAGCTACGGAGCATAGCAAAGCCTGGGGACGTTGAGGCGAAAACGAA GGAGGCGGCCACGGCTTCAAAGGGGAAGCTAGCAGACGCGGTGCTTGGTC TAGAGCGGAAAGAAATGACGGAGGACGAGGAGGAGGATGTCATGCACAGG CTGACGCGCGCCCACACAAGGGCGTTCGCGACGCAAGCGGCTCGGATGGA AACCCTGGTGGCCGGGAAGAAGTGCGAAGGTTACATGACCGACTTGATAA CAAACAAGACGAAGTGGACGTTCTGCTGCCGGCCCACTGTCCTCACGCTA GGCATGGTTGCCACTCAGCGCACGGAAGGTTTATTCGGAGTGGCGAAGCG CTCGGGTGTCGAGAAGAAGCTTTCACTGTGCGCTCTTTGGGATCGCCTGC AACACCTGAGCAAGATGATTGCCATCGAGACAGCGAGGTTAGAGACCCCC CCAATCACCCCTGGGGTGGCGTTCCGGGACAAGCACGTCGAAGAATTCTT CCAGCCAGTGAAGCAAGAGCTTTTGGCCTGTGGTGCCAGCCAGTACTGCC AGAAAGTCGACGGATCGGAGTCGTATGACGTCGAACTGGTGACTTCCGGA AATGTGGACGAAGACGGACAACCGCTTCCTCTACACGACGACGACTTTGT CCAGATACGCAATTTGCGCCTCAAGCTCAACATTCTCCAGGTCGCACCAC CTGATACCGATCTGGAGAGAGACTCGCACTACTTCGCGGTTCTTGTCAAC CTCATCGGGAGAACTGGCGGGGAGGACGAGTTGAGCTTTACGCATGCCTT CGACGGTGCGTGTTTCCACAACCGTTGGCGTCAATCAGACGACGGAAAGG TTTTGCCATGGAGCGTCTCATTAGTGCTGTCGTCGTCAGGCCACGGCGAA GGATGGGACGGGCATCGCCAAGGATGCGATGCCCACTGCTGGGGACCGAC ATGCGATGAATCGTTCGATGGCGCACACCCCGCTGAACGTGCGGTGCGGG CCGCGCAGGATAGAAGCGCTGGCGACAAACGTCGCGTCTACGCCCATCTC ATGGCGAAGGGCAAGGAGAACGTAGGAGATATTATAAGGTCCGTACCCCT TCACCAAGCACTGTCCGTCCAGGTCAAGGTTGACAATTTCCTCGGGTATC TTCTGAAGGAGACCGCGGGAGACACAGGAGGACCCAAGAATCCTGGGCAA GCACCCACGAAAGGGAGACCTGAGAAGGACGGCAAAGAGGGAGCAGCTGG CAACCCTGCGGGCCAGCAAGGAAAATCCCGTCAGACTAGGAGGATGAGGG ACTTCAGCGACGTGCCAAGGACGAACAAGAGGAGAAAGCTGAAAGGTGCT GATACCAGCACCTAA back to top
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