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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 55529.EKX50313 |
| ProteomeId | EsuBft1076_6 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SignalP-noTM |
| Protein domains | IPR022017 |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 180 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 8.73e-24 |
| EggNOG OGs | 29Z2R@1|root,2RXVA@2759|Eukaryota |
| Ec32 ortholog description | Domain of unknown function DUF3598 |
| Ec32 ortholog | Ec-12_000370.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1076_6a-0001 ID=EsuBft1076_6a-0001|Name=EsuBft1076_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1800bp|location=Sequence derived from alignment at Scaffold_211:106681..113013+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCTCGCCGACGTTCCGTGGGCTGCTGAACTGGTCAAACAGCCATGGAGCT TTCAGGCGTTCTTCTTGGTGCCGCCGCCCTGGTACACCTTCCTACGGTAT TGGCATTCAGCCTGCCCTTGTCACCGCCTGGCCGAGACTGGAACGACTAC ACAGAGCAGCATGTGGGGAAGTGGCGCGGCTTGTGGACCACATATAATTC TGCTGGCGTGGAACGTGGAGATCCTGACCGCATGGACACCACGATCTCGC TGTCGGTCGATGGGAAAACCGTAGCACATGTCAACACGCTGTTCGTGGGT TCGGTGGGGTCAGACTGTTCCACATGCCACGACAGTGTGGAAACCCGAGA TATTCCAGCCGGGCAGTATACGACGGAGACGTTTCGGCACCGAGCTTCTT CCGGCTGCTATTTGTTCGGACCGGGTGTCACAAGAGGAGGGGACATGACG ACTGAGTTGGGGTTCAGGTTGGACGAGGACCGGCGGGGGAGGGGACTCGT TTCTCACCGACCACAGGCCAACGGGGTCGAACCACCCCTACAGCTCGCGC TGCAGCGAATAGTCGTAGTTCGAGAAACTCTTGCAGCACAACGGCAGACT CCGCCTTCTACTTCTTCATGCTGGTCTATTGATCGACCGAGCTGGCTTGG CCTTTGGCGTGGCCACGAGATGGTCCTCGATGACGGTGGTGGCGGTGCGG ACGGTGGTTTGTCGTGGAAAGAGAAAGCGCTGCCTCCGACACATCTGCGT AGGTGCCGCTGCTCAGGTGCGGCAAGTGAAGACGATGACTCGCATGCCTC TTTGGAGCTGGATGGTGGAATTCTCCTCGAGGCGCCGAAAATAGTGGATG CGGGGAAGCCGGCGGAGTTGTCAGTACGTTGCGCGATTGGCCGAAAGAGC AACGCGGCAACACCGAACCGTATTGTACAAGCAAACGTGCGGTTGGAAGC CCTTGGCAGAGTTGTTGACACCGTACGGTCGGCAGAGGGACAAAATGTAC GTATCGCTCCCCCCAAGCTCCTTCAACTTTCTGTTCATAGCTTGACACCG GTAGAGTCTGCAGGGCTTTAATGATCAATATTTTCACCGAAGCTGCCTGG TCTAGAATGAGTGGCTGGGCGGTGCCGCAAGCCATACCCTGAAATTTGTT TTGCGTCACACGTCGTGCACACAGGTGTTGTTTAGGACGCCAAGGGTCGA CTGGAAAATGTTTCGCTGCTTCCTTGCCGCTTAGAACTAACTCAACGTTG ACCACCTCCCTCGCCACGACGAGGTAGTAGTATGCGAGTGATGTCTTTTT GTCGTCGTAGGGTGAAGGAAGCCGCGTTAAGCAAGCAGAGGGTACGTAAG CGTAGGAATGGTCGAGGTGGCGGAACAGATTAGGCAGGTGGCTTGAATAG CAACTTGTAGGCAATATTCTGTAGGGTCAACCAAGGCGCGAAAACCCACG CATCAGGTTGCGAATGCCCAATACACTCAACCAACTGTGAAGCACGATTG CGAAGCGGCGTAAGAAACCACGAACACAACCAAGCGCTTGAGTTATTAAT ACTTCGTGTACCTGTCAATGAAAGCTGGCAGTCGAAATGGTAAATCCCCC GCAGGCCACTTACGTTGTTCATTATTCCTGCCACCAAACCAAGGCCTCTG TCGGACTTGTTTCGCTGCACCATCTTTCGCGAGTGGATGTGTGTGTGTCT GTGCGTTGGTGTTGTGCTCGTGGTTACATGATTCTGTTGCTGCCGTACAA ACGACATGTTGGTGTGTCTGCTGTTCATGGTTCAAGATGACCCATACATC back to topprotein sequence of EsuBft1076_6a-0001 >EsuBft1076_6 ID=EsuBft1076_6|Name=EsuBft1076_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=342bp
MELSGVLLGAAALVHLPTVLAFSLPLSPPGRDWNDYTEQHVGKWRGLWTT YNSAGVERGDPDRMDTTISLSVDGKTVAHVNTLFVGSVGSDCSTCHDSVE TRDIPAGQYTTETFRHRASSGCYLFGPGVTRGGDMTTELGFRLDEDRRGR GLVSHRPQANGVEPPLQLALQRIVVVRETLAAQRQTPPSTSSCWSIDRPS WLGLWRGHEMVLDDGGGGADGGLSWKEKALPPTHLRRCRCSGAASEDDDS HASLELDGGILLEAPKIVDAGKPAELSVRCAIGRKSNAATPNRIVQANVR LEALGRVVDTVRSAEGQNVRIAPPKLLQLSVHSLTPVESAGL back to topmRNA from alignment at Scaffold_211:106681..113013+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1076_6a-0001 ID=EsuBft1076_6a-0001|Name=EsuBft1076_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6333bp|location=Sequence derived from alignment at Scaffold_211:106681..113013+ (Ectocarpus subulatus male Bft15b) TCTCGCCGACGTTCCGTGGGCTGCTGAACTGGTCAAACAGCCATGGTAAG
TTAGTATCGATACCTACAACAGAGGCGGTGGTACTGCAGCAGTCCACAGT
CTGTGCGCTGGGAAATTGATGTGTAGGCGAGGCTGCGTGTTGACTTCAAG
CAGTACGTCAGGCTTGGTCTCGTTGCATGTTATGGTGGGATGCAACCACC
TATCCTCCGTGCACTTTCCGATGTTAGAAAGGCTACCCATTAAACTAGTC
TACAGGATGCACGCACGGATTCGAATCCCGGCGGCTCACTCGCACAAGCA
CCATTTGTTAGACTCTTTTTCTTCAGCGCCTGGCGAGGGTTCCGTCCCCG
GAGATACCTACTTCCAAATATGCCAGTGACCAACCGGGTGGCTACCAGCC
GAGAGTATATCTTGTGTTAGAAAGGCTTACCCATTAGACTACTGAGTCAG
CCTAAGGCTTACCCATTAGACTACTGAGTCAGCCTAAGCCTTTCTAACAT
CCGAACAGTGTTTCTTGAGAGAGGATCAATGAAATATGTGGTTTAGCACT
TGTTCGCAGTTGCTGCGTATCATGGTCCATCATACCGTCAGACTTGTTAG
CATTTTCACAGTCCCGCGAAAAGTACAGGACGACGACGGGACTCTGTTAG
CCCTGCGCCTGACCCTGTTTTTTAGCCCAAATTCTGCCACGCGGAGGTTC
TTTCGACCAGACTTTTTTCTTTTTGTTTTCGTTGCCAAGCCAATCAAAGC
CGACTAATTTTGACAGCGGCGTCCATTTCCACGGCGAACAGACTGAACAT
GTGCTGCGATGGCTTGTATTTTGAGCGGGCGTGGATGCGCGCGAACAACA
ACACATACACGGACAACACACGGCGGTGAGGTTGATGCGTGTGCTCCCTC
GTGATCAAACTAGACCTGCGACCACCTCACTGCTGACCGGCGCCAAAAAT
CATGGCCCCGAGTGGCAGGTTAGGAGCGTGGTCGACGATGTTGTGTCGGA
GTCGGAGTCTGAGAGTGGTCTGTCCGACGAGCTGAGCGGGGAGGACGGCG
ATGAGATGTAATAAAGAATCCGCGATGGATGAAGGCAGATGCATTTTGAA
TCAACACGAAAAAAAAAACGTCGTTTGAAACAACGCAACACCACCCAAAA
GGCACTGCCCCCGCTCGCGACCTTTCCTCCCCTGCACGAGGTCGAAGAGG
TATTGCGCAGCACGTGTATAAGCCAGAGCTACTGATGGCGCAGTAACGAT
AGAAAGAGCTGCAGTGCCGCCGGCGGTACAGCCTTTGCCCCGTGACACAA
ATGTAGGCGATGACGAAAGAAACGCCGAAGTTGATGGATGATGGCAGGCA
TATATATTTTTTTCGACACGAAAAAATAAAGTTGATTTGACACAACACAA
CATCAAAAAGAAACTGCCCACGCTTGCAACCTTTCCTCGCCTGCCTGAGG
CCGAAGAGGTACTGCGCAGCAAGTACGTAAGCCAGAGCTACTGATGGCGC
AGCAACGACAGAAAGAGCTGTGGTAGCGCCGGCGGTACAGCCTTTGTGCC
GTGGCACAAAATCATTTCACCGAAAAATTCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCGGCAGCGGCAGCAGCAGCAAGAAAAACACACGCACCA
AAAAAAACAAAAAAAAACTCTCGCACATCATCCCAGGTGCTCCGGCCACC
ACCGCGCTCGCTTTGCCTCCGCCCGCGCCCACGAACCTAAGACGACTGCC
TACCACCCCGCCCCCTATCAGCTTGTGCTGCTACCTGGCGTAGCTCTCGC
TGCCTGCTTGCTTCAACTTTTTCTGCTGCTGCTGCTTCTTTTTCTTCTGC
TGCTACTCTCTCTGCCTTCCTCTTTGCCGCGTTCGCCTTGTTCTTTTGTA
CGCGGGCGGCGTCAGCTTTCGCCGTTGCGGCGTCGCGGCTCCGTGTCAAC
TCCTTGACGTCTGCCCTCCTCACCAGCCCGTCGAACCTTGCTTGCGACGC
CCTGGCCTCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTTTCTCTTTGCCGCG
TTCGCCTTGTTCTTTTGTACGCGGGCGGCGTCAGCTTTCGCCGTTGCGGC
GTCGCGGCTCCGTGTCAACTCCTTGACGTCTGCCCTCCTCACCAGACCGT
CGAACCTTGCTTGCGACGCTCTGGCCTCCATGGTCATACCATGTTTTTCG
ACACATATCTCGTTTTGTCTCGAGAACTTTTGCTTTGTTTTTTCCTCGAG
TCCGGCGGCTTTTTCTTCCCAGACGTACCCATGAGTACCCGATGAGTACC
CGATCTGGGGATTCGTTTTGCGCGACGATGACGCAGTGGATTCCAGCGTG
GCTTTTTGCGGCACTTTGCTGAGAAGGAGAGCTACGATTGCATCGGTGGC
GATTTGCGTTGAAGTTGCTCACGTTCGTGGCAGCAGGCGAAAAGGGCCGA
AAATCACTTGTTCTTAGAGTGTTCGGTGGGTTAGAACCCGCCGATTGAAA
AACTGACCGATGAATCCATAGATATGTCCTGTTAACAGGTGTGTACTGAA
CCGCAAGAGCCAGCTCGTTTGTGGCATCGAGTATTTCGCGTTCTTCTCTC
GATCTTTAATATCAAGTCAAAACAAGATTTGGCGCCGGCGACCTGAAAAG
CGGAAAAACTTTATTTTTGTGGTTTTTCGACCAGCAGCCCGACCACACGC
ATACACCAAAAAGGGGGGTCACGCGCAGGGCTAACTGTAGACTAGTCTAA
TCGGCTGGCTCGACGACTCAATATTCCAAGATCACTACAGCGGTGGCCCT
GTAACTGGCAGCTTGTGTAGCACGTTTAGAATAGCAAACTTGATGGCGGT
TGGTTGGTTTTCCCGCTGCAATTTAGGGTCCACAGTCCACAGCCCCTGAA
ACACCTTGAGGTTCATTTCTCATTTTCTCTGACACCTATGTGTCCGTAGT
GCCACAGTAGGACTCGAAGTGCACGGCTGGAAATTTGATCCCTGGTGTTT
TGATCAAGTTCTCAAGGTTTTCTCTCAACATCTTAACACCCCGAATTCAT
TCCGAAGAAGTGAGTGGCGGGTGTTGCAGTATGGAGCACGCACGGTGTTT
CGACAGGGTGCGTCAACGGCGAGAGTTCCTCTCATGAGCATGCCGTCATA
TTCAAATGCGAAACGTACTTAGCAGCTCCTTTCCCTCAAGAACACTGGGA
ATTTGGCGCCTTTGACCGCTATCCGCAAATACACCATTACTTATGCAGAC
ACCCCCCGCCGACATCGAACAACGACGGGTTTCATGACGATATTTTTCTC
TCCACAGGAGCTTTCAGGCGTTCTTCTTGGTGCCGCCGCCCTGGTACACC
TTCCTACGGTATTGGCATTCAGCCTGCCCTTGTCACCGCCTGGCCGAGAC
TGGAACGACTACACAGAGCAGCATGTGGGGAAGTGGCGCGGCTTGTGGAC
CACATATAATTCTGCTGGCGTGGAACGTGGAGATCCTGACCGCATGGACA
CCACGATCTCGCTGTCGGTCGATGGGAAAACCGTAGCACATGTCAACACG
CTGTGAGTAAGGTCTTTCACGGGAGATTGATCTGCGGCGAGATTCGTGTG
CGTCAAACCATTGTGGAAGGCTGTACACGAGGCCTTTTGCCCGAACGAAA
ACTTCACATCAGTTTTACAGCAGTACTACGGTAGATAGAGTGTACGGGTT
CGTTAGCCGCCATGTAGCAGACCCATACCTTGCAGCAATCTATATTGCGA
TGCCTTTGACGTGCGGATGCCCACGCACAACAGCGTAGGTACGTACGTGT
ACCAGCGACGGGCATGGGACAGGTGCGAATACATGTATGCGCGCCCCCCG
TTCTCTAGTTTTCCACGTGTACATGAGGTATTGTTTGTAGTATATGTTGC
GTTGGTGCCACACACCGACGAAGAAATCAAAGGATGAAGTCTCTCCGCTG
TTCGCGGGCGTCAGCATGCACATCGGGAAGAGGCACGCGCTCTGCATTTA
GTGGGCAGCGTATCACATATCACACCACCGAAGAGCACCAGCAGCAACCT
AGACATAGGATTGTGACAGAGTTGCAGGCTTACCGCTTACCCGCCACATT
CGATCGTCTCATAGCTGCCGACTTTCCCGCGTAGAGAAGCAAGCAGTCTA
CGCTACTACCACAGGCACTTTGCATGCACCACAATAAGCCTTGATTCGAT
GGGCATGAAATTTGCGCGAGAGACCAAGAGACCAAGCAGCAGCAACAGCA
GGCCGGGTAGAATGCTTTGCACTAGTCAGTGGAGCGGCGCAAGTGTTCAA
CCTGAACCCATCCCGTGCAACCATCCTGAGAACGGATAGCAGTAGACCCT
CACGCCCTCCAGTTTTTTTCGATCGATGGTAGGTGTGCTCTCGACTAAAC
AAGATGTGTAAATGCTGTGTGTGTGACATTTTATCGCTCTGCCGTTTGAG
CCGCCAGCTGAACCCACTCAACATGAATAAACACCTGCGAGGTAACACAT
GACGCATGATTACGCCCACGACAAGCAGGTCGGATTGGGCCCCTCCTGGT
ATTCACGGCTGGCCTCGGATTTGCGTCCCAGCGGTGACGATGGGTGCTTT
GCTTGTGTTGCATCTCTGTTTCTTCGGCTGCGGGTTTGACTACAAGTATA
TTTCTATGGCCCGTACTGCTATTGATAGGTGTTGCTGTAGTCATGTGTAT
TTCCGAACAGAAGCGTACCTAGAATTGCACCTATGTTTCTGCTGGCAACG
CGGACGTTGATGTCATGCGGCAGGTTCGTGGGTTCGGTGGGGTCAGACTG
TTCCACATGCCACGACAGTGTGGAAACCCGAGATATTCCAGCCGGGCAGT
ATACGACGGAGACGTTTCGGCACCGAGCTTCTTCCGGCTGCTATTTGTTC
GGACCGGGTGTCACAAGAGGAGGGGACATGACGACTGAGTTGGGGTTCAG
GTTGGACGAGGACCGGCGGGGGAGGGGACTCGTTTCTCACCGACCACAGG
CCAACGGGGTCGAACCACCCCTACAGCTCGCGCTGCAGCGAATAGTCGTA
GTTCGAGAAACTCTTGCAGCACAACGGCAGACTCCGCCTTCTACTTCTTC
ATGCTGGTCTATTGATCGACCGAGCTGGCTTGGCCTTTGGCGTGGCCACG
AGATGGTCCTCGATGACGGTGGTGGCGGTGCGGACGGTGGTTTGTCGTGG
AAAGAGAAAGCGCTGCCTCCGACACATCTGCGTAGGTGCCGCTGCTCAGG
TGCGGCAAGTGAAGACGATGACTCGCATGCCTCTTTGGAGCTGGATGGTG
GAATTCTCCTCGAGGCGCCGAAAATAGTGGATGCGGGGAAGCCGGCGGAG
TTGTCAGTACGTTGCGCGATTGGCCGAAAGAGCAACGCGGCAACACCGAA
CCGTATTGTACAAGCAAACGTGCGGTTGGAAGCCCTTGGCAGAGTTGTTG
ACACCGTACGGTCGGCAGAGGGACAAAATGTACGTATCGCTCCCCCCAAG
CTCCTTCAACTTTCTGTTCATAGCTTGACACCGGTAGAGTCTGCAGGGCT
TTAATGATCAATATTTTCACCGAAGCTGCCTGGTCTAGAATGAGTGGCTG
GGCGGTGCCGCAAGCCATACCCTGAAATTTGTTTTGCGTCACACGTCGTG
CACACAGGTGTTGTTTAGGACGCCAAGGGTCGACTGGAAAATGTTTCGCT
GCTTCCTTGCCGCTTAGAACTAACTCAACGTTGACCACCTCCCTCGCCAC
GACGAGGTAGTAGTATGCGAGTGATGTCTTTTTGTCGTCGTAGGGTGAAG
GAAGCCGCGTTAAGCAAGCAGAGGGTACGTAAGCGTAGGAATGGTCGAGG
TGGCGGAACAGATTAGGCAGGTGGCTTGAATAGCAACTTGTAGGCAATAT
TCTGTAGGGTCAACCAAGGCGCGAAAACCCACGCATCAGGTTGCGAATGC
CCAATACACTCAACCAACTGTGAAGCACGATTGCGAAGCGGCGTAAGAAA
CCACGAACACAACCAAGCGCTTGAGTTATTAATACTTCGTGTACCTGTCA
ATGAAAGCTGGCAGTCGAAATGGTAAATCCCCCGCAGGCCACTTACGTTG
TTCATTATTCCTGCCACCAAACCAAGGCCTCTGTCGGACTTGTTTCGCTG
CACCATCTTTCGCGAGTGGATGTGTGTGTGTCTGTGCGTTGGTGTTGTGC
TCGTGGTTACATGATTCTGTTGCTGCCGTACAAACGACATGTTGGTGTGT
CTGCTGTTCATGGTTCAAGATGACCCATACATC back to topCoding sequence (CDS) from alignment at Scaffold_211:106681..113013+ >EsuBft1076_6a-0001 ID=EsuBft1076_6a-0001|Name=EsuBft1076_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1029bp|location=Sequence derived from alignment at Scaffold_211:106681..113013+ (Ectocarpus subulatus male Bft15b) ATGGAGCTTTCAGGCGTTCTTCTTGGTGCCGCCGCCCTGGTACACCTTCC TACGGTATTGGCATTCAGCCTGCCCTTGTCACCGCCTGGCCGAGACTGGA ACGACTACACAGAGCAGCATGTGGGGAAGTGGCGCGGCTTGTGGACCACA TATAATTCTGCTGGCGTGGAACGTGGAGATCCTGACCGCATGGACACCAC GATCTCGCTGTCGGTCGATGGGAAAACCGTAGCACATGTCAACACGCTGT TCGTGGGTTCGGTGGGGTCAGACTGTTCCACATGCCACGACAGTGTGGAA ACCCGAGATATTCCAGCCGGGCAGTATACGACGGAGACGTTTCGGCACCG AGCTTCTTCCGGCTGCTATTTGTTCGGACCGGGTGTCACAAGAGGAGGGG ACATGACGACTGAGTTGGGGTTCAGGTTGGACGAGGACCGGCGGGGGAGG GGACTCGTTTCTCACCGACCACAGGCCAACGGGGTCGAACCACCCCTACA GCTCGCGCTGCAGCGAATAGTCGTAGTTCGAGAAACTCTTGCAGCACAAC GGCAGACTCCGCCTTCTACTTCTTCATGCTGGTCTATTGATCGACCGAGC TGGCTTGGCCTTTGGCGTGGCCACGAGATGGTCCTCGATGACGGTGGTGG CGGTGCGGACGGTGGTTTGTCGTGGAAAGAGAAAGCGCTGCCTCCGACAC ATCTGCGTAGGTGCCGCTGCTCAGGTGCGGCAAGTGAAGACGATGACTCG CATGCCTCTTTGGAGCTGGATGGTGGAATTCTCCTCGAGGCGCCGAAAAT AGTGGATGCGGGGAAGCCGGCGGAGTTGTCAGTACGTTGCGCGATTGGCC GAAAGAGCAACGCGGCAACACCGAACCGTATTGTACAAGCAAACGTGCGG TTGGAAGCCCTTGGCAGAGTTGTTGACACCGTACGGTCGGCAGAGGGACA AAATGTACGTATCGCTCCCCCCAAGCTCCTTCAACTTTCTGTTCATAGCT TGACACCGGTAGAGTCTGCAGGGCTTTAA back to top
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