EsuBft1074_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1074_6a-0001
Unique NameEsuBft1074_6a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_70contigScaffold_70:31180..38619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G3K9
ProteomeIdEsuBft1074_6
Protein domainsIPR022127
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsTMhelix
Protein domainsPTHR31735
Protein domainsTRANSMEMBRANE
Protein domainsNON_CYTOPLASMIC_DOMAIN
Ownerapollo_admin@sb-roscoff.fr
Notetransmembrane protein 110 os:homo sapiens gn:tmem110 pe:2 sv:1 [Automatic annotation]
Nb exon6
Max annot lvl2759|Eukaryota
Length2116
Hectar predicted targeting categoryother localisation
Evalue2.17e-163
EggNOG OGs2BJXQ@1|root,2S1HE@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameTMEM110
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005246,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005938,GO:0007154,GO:0007165,GO:0008150,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010959,GO:0012505,GO:0016020,GO:0016021,GO:0016247,GO:0019722,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0031090,GO:0031224,GO:0031984,GO:0032237,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032541,GO:0032879,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035556,GO:0035584,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050848,GO:0050850,GO:0050896,GO:0051049,GO:0051050,GO:0051716,GO:0051924,GO:0051928,GO:0065007,GO:0065009,GO:0070884,GO:0070886,GO:0071782,GO:0071944,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099568,GO:0106056,GO:0106058,GO:1901019,GO:1901021,GO:1901339,GO:1901341,GO:1902531,GO:1902533,GO:1903169,GO:1904062,GO:1904064,GO:1904427,GO:2001257,GO:2001259
Descriptionactivation of store-operated calcium channel activity
COG categoryS
Cross References
External references for this mRNA
DatabaseAccession
GO0005773
GO0003333
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1074_6aEsuBft1074_6aEctocarpus subulatus male Bft15bgeneScaffold_70 31180..38619 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1074_6a-0001EsuBft1074_6Ectocarpus subulatus male Bft15bpolypeptideScaffold_70 33348..38582 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1074_6a-0001-exonagat-exon-48848Ectocarpus subulatus male Bft15bexonScaffold_70 31180..32040 -
EsuBft1074_6a-0001-exonagat-exon-48850Ectocarpus subulatus male Bft15bexonScaffold_70 32087..32549 -
EsuBft1074_6a-0001-exonagat-exon-48844Ectocarpus subulatus male Bft15bexonScaffold_70 33310..33369 -
EsuBft1074_6a-0001-exonagat-exon-48846Ectocarpus subulatus male Bft15bexonScaffold_70 33934..34023 -
EsuBft1074_6a-0001-exonEsuBft1074_6a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_70 34782..34993 -
EsuBft1074_6a-0001-exonagat-exon-48847Ectocarpus subulatus male Bft15bexonScaffold_70 35775..35918 -
EsuBft1074_6a-0001-exonagat-exon-48845Ectocarpus subulatus male Bft15bexonScaffold_70 36291..36410 -
EsuBft1074_6a-0001-exonagat-exon-48849Ectocarpus subulatus male Bft15bexonScaffold_70 38454..38619 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1074_6a-0001-exonagat-three_prime_utr-702Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_70 31180..32040 -
EsuBft1074_6a-0001-exonagat-three_prime_utr-703Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_70 32087..32549 -
EsuBft1074_6a-0001-exonagat-three_prime_utr-704Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_70 33310..33347 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1074_6a-0001-cdsEsuBft1074_6a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_70 33348..33369 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1074_6a-0001-exonagat-five_prime_utr-437Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_70 38583..38619 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1074_6a-0001 ID=EsuBft1074_6a-0001|Name=EsuBft1074_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2116bp|location=Sequence derived from alignment at Scaffold_70:31180..38619- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
AGGGATTGCTGACTGTACGCTTTGGTTCGAAGCGTTGATGCCTCATCCGC
CGCCGCCTTATGGCTCGTTGCCACAAGGCGACGCAGAGGGCTGCCATCTG
ATCTCGGAGAATTACGCGTATGCTCTTCAGTTTATTCTGGGATTCGCTGC
GTTAGCTGGTCTGGTGTTCAAGCGATGGCGGGCTCCGGTGAAGCGCGACT
TGGTGGTATGGATGTACGATGTTTCTAAGCAAGGCTTCGGCGCGATGTTT
ATCCACGTGTGGAACATTCTCCTGTCGATACACGAGGGCGGTGGGATTCC
AGGATCAGACGAATGCGCCATGTACTTCGTGAATTTCTCGTTAGACATCG
CCATCGGCACGTTCATGATTTGGTGCTTCGTCAGGGTCCAGGAACTTACT
GCGGTGCGATGCGGTATCGATAGCCTCAAGGTTACGGGGGACTACGGGAC
GCCGCCTCTCTTCTCGGTGTACAGGACACAGCTGCTGGCCTACACGGTAA
TCCTGGTGATCTGCAAGGCGGTGACGACGGCCATCGTGATCGCCATGGAC
GAGGTGCTTTCCTCCCTGGCTAAGGCCTTGTTCTCCCCCGTCAGCGCCTA
CCCGGAGCTGGAGCTTACTCTCGTGATGATCATCTGCCCTTGGATCCTCA
ACGCACTGCAATTCTGGATCTTGGACGACGTGCTCATGTCGGAGAAGGTC
GTGCTGGACACGCGTTCGGGCTCATTCGGAAAAACGTATGACAGAGACGG
ATAGGATAGCACATGCCCAGAAAGCCGTTTGGAAATGACGCGATACGAAC
ACATGGCGGACACGTCGGACGGCGCCGACAGGGGTAGAGGGGGGGGTGGC
AGCGGCAGTCTAGACGCTTCTGGCCAAGACGCGTCGGAGAGGGATGGGTT
GAACACGCCTACCGGGCTTCCTGCAGAACCTTCTTGGATGTCGGAGCCGG
GGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGGGGGGGGGGGGGGGGGATTATTGGGTGGAGAGAGGGGC
TCCGAGAGCGAGGGGACGATGGGGGGGGGTCCAGAACAAGATCTATGTTT
TGATAAGAGAATGGCTCAGTTTTGGCGTGGTGGGCGATCAGGATGCAAAG
CTTTTGAGGAACGGTTGGATGCCATGTCCTGTCTGTAATATTCCACTGGA
GGGGGAGGATCGAGGGCGAGCAGTGCTGCACGCAACTCGCCCTCTGAAAA
TATGTGATTTTGAGTTTGTTGTTCTTGTGAATGTCGCGTGTGTGCAGCAA
GTGTTGTAGGTGTTTGCACGGCTTTCTTTCTGCTGCCGGGACCTTCTGAT
CGAGAGACGAGGCAAAGTGACCGCAGGACCGATCTCGGTCAATTTTTTTG
CTGTCCAAGTATGGTGTATCGGTAGAAGTTGTACCTCCGGGGATCAAGCT
TTGGAGGGCATGTGTCTGGCGGTGTGCGAATTGGCAGCAACGGCTATCAG
TTAGCAGGAGCAGCGACAGCTAGAAGTCGGGCTTGCTAGCAAACTGTGTG
TGTGTGTGTAGCGTAGCTCTGACGGCACGTTTTTTTGTTTCTTGTGCTGT
TTGGGATACAACAGGGGGTGTGTGCATATATTTCAGGAAATTCTCTGCTG
CTCGTTCCTTGAAACGCCGGTGTGTTTGTGGTTTTCCTCTCTCGGGCAGG
CGTCGTGGTTGGGGCCAATGTCATCGAAACCTGCTCGGCTCTGCTGCCGC
AAAAGCTGTCTCCTTCTCTGCACGAAACACATGTGCCAGAAAATCGCCTA
CTAAGGGGTAACTGCCATTCGTTGTTCAGTGTTGTTTTTCCAGTAGGCCA
CTTGTATCTCGCGTTGCCCAGGATAAATACTTGCGGGTGGTAACGTTGAC
ATTTGGTGTGCTTGGTTTTAGTTTGTACTGGCTTTGTCTTTGTTTCATGC
AAATTTATTACTAGAATCCTTCTTTTCTCATCTTTCTCCTCGCCTGCGTT
GGCTTTTTTCGACCTT
back to top

protein sequence of EsuBft1074_6a-0001

>EsuBft1074_6 ID=EsuBft1074_6|Name=EsuBft1074_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=238bp
MPHPPPPYGSLPQGDAEGCHLISENYAYALQFILGFAALAGLVFKRWRAP
VKRDLVVWMYDVSKQGFGAMFIHVWNILLSIHEGGGIPGSDECAMYFVNF
SLDIAIGTFMIWCFVRVQELTAVRCGIDSLKVTGDYGTPPLFSVYRTQLL
AYTVILVICKAVTTAIVIAMDEVLSSLAKALFSPVSAYPELELTLVMIIC
PWILNALQFWILDDVLMSEKVVLDTRSGSFGKTYDRDG
back to top

mRNA from alignment at Scaffold_70:31180..38619-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1074_6a-0001 ID=EsuBft1074_6a-0001|Name=EsuBft1074_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=7440bp|location=Sequence derived from alignment at Scaffold_70:31180..38619- (Ectocarpus subulatus male Bft15b)
AGGGATTGCTGACTGTACGCTTTGGTTCGAAGCGTTGATGCCTCATCCGC CGCCGCCTTATGGCTCGTTGCCACAAGGCGACGCAGAGGGCTGCCATCTG ATCTCGGAGAATTACGCGTATGCTCTTCAGTTTATTCTGGGATTCGCTGC GTTAGCTGGTCTGGTGGTGAGCAGTGCAATGTGGTGTTCGTTCGCGCCGC GTTCTCTTTTAGCGTTTCGGCGGGGTCGGGACTTTGCTTTGTTTTCTTTG GGCGTCCAAAAGGCGGTGTGTCCGCCAACGGATCGAGGGTAATAGGTACA GCAGCAGTGTTTTTCCCCCCCCCCAAGATGTATAGCCTTGTGAGGCGGGT CCGGAGTGGCACGGCGCACTGCCCGCGGGATCTGAAACGGGTCGTTCTGT CTTGTTCTCTGAAGAAGCTGCTCGACCCTGATCACGGCGGGTTGCTGTTG AGAGCTTGGTTCGTGACTTACGGCACGTGTCTGGTGCGCGCCATGCCCAT AAGTAACACAATCACCGTGTCGGGGAGGCCCTGGTTCGCGGGCAGAATTC GCCCTTGCGAAGCCGTCGCAGAAGCACTTACCTGTTGTACCCCCAAGCGG GCATTAGATTTGTATTTTTACTAGATTTTTCCCACGCAGTAGTACATCAT TGGTGGTTCCAGACGAGAAGCCACCAACTTTCACCCACGTCGTTGAACAA GCAACGTTCCGAAACGGCGCGAACAGAGCGGTGTGTGTATCGTACCTTCG CATATTAATATGAATCCGTGGACTATCTATGAAACATACGCATAAATACA AACACAGAAAGACTAACCCGTTCGAGATATGACCACAGCAGTCGAACGGG ATGTGTTGAAGTCTTCACAATAACTGGACTATGTTGTGGAGATGACAGAG TTTGACAAAACCCAATCAACCGCTGTTGTCACTCAGCCAATCGGTAGGTT CGTCGGGCGGTGTGTACGAAGGGCAGGGACGTGGGTTATGTCTACTTTTT TGTTTTTTTTCCAACACAAACAAGTTCTTCTTGGGAATGAGGGCATCTCT GGATGCTGTTTAGACTACATATATCCGTACGCTGCTTGCACCTACCTACC ATTGTTACAAAGAGATTAGAGGATGAAGATGGACCTCAAAATTCAGGATA TATCGCGGAAGTGTTTTTCAGCGCATCACTGCTCAAGAGCTTCGACGCGG ACCGCTATTCAGCTGCTTCCTGCATGGCGTGCTGGCGCGTGTGCCGCCAT GAATTGTGATCATAATCGGTTTCGCACGCCCGATATATGTTCTCAACACA ACCGTCAAAGGTAGACAGCCGCACATGCATCATTCCAAATCCAACTTCAC TCCTTCGAATTACATACAATTTCACGGCCTGTTTTTGACATGCATCAAGC AACGCGAAGCAGTATCTAAGGGCTTCATGACGGGAAGGTCGCGTTTGTTC GTGTGAACTTATCTACGTGAACGATGATGGTGGGTCTGCCTTCTCCTGTC AGCGTTCATGTAGAGAAGTTCACACTAAAAAACGCGACGTTCCCGTCAAG AACCCCTTCGTAGAGACTGCTTGGCGCTTCTTGGTGCATGTCAAAGGACA GGCGTTCAGGGGACGTTAGGAGGAGAGACGTTGTATGCAGAATGGCGCAT GTTTGCCTGTCTGCCGTTGTTGCGTCCTTTACGGTCGTCTTGAGCAAAGG AATCGAGCGTGCGACAACGATAGATTGCAATAACCTTTCGCCAGGCAGGC GTTGCTGGCGGCGTGTGACCCCGCTCTCTATCACCGTAGGAGGCGGAGAG AAGGCACTCTACGTGGGCCAATTTTCAAGCTCGATTGCTTCACAACGAAG AAGGCGGTGCCCTCCACCACCAAGAATGGCAGTTTCGGAAGCACCTCGTC GAGGGAATTCCGCAGACGTATCGGGCTCTTCACGCACCCACTTGGTTATG GAGCAATCGAGCTCTGAAAGTCTGTCTAGGGGAGGTGCCATCTCTCCCCC TCTTTTGGGACCCTCTGTTCTCAAGCTTGTGCTCCATACTGGTGCGGGCA ACCTGAAACAATTCATGGGGGGGCTCTGCCGCATGTCCTGATCGTGCCGC CCGTCCCCTACTTGACAAATCTCTCTGAACACGACGCGTCCTGCTCGTCA ACGACAACATCGTTTTTTTCACCGGGGCGGGGCGATTCCAACCCGCACGG CGCTTCTAGTTCAAGCGATGGCGGGCTCCGGTGAAGCGCGACTTGGTGGT ATGGATGTACGATGTTTCTAAGCAAGGCTTCGGCGCGATGTTTATCCACG TGTGGAACATTCTCCTGTCGATACACGAGGTACGTGAGCTACATAGGTAT TATAGTGTGTGTCTTGCTATGGCGGCGTGTCGTGTGGTGGTGGTAGGTGG CGATGGCGGCGTGTTGGTACCTGCGACGCCGCCATCGGGTGTGTATTTGT ACGTGGTTACTGCCAATTTGTTGTGCCCATGTTTTTCGAGTCGTCGGCGT TTTTGCGGGCGTCGCTGGAGTCTTCAACCTTCCCCCCTTCGTGCGACGCG CCGAATACCTCACGGCGCTTAGCGCCTGGTGATGTGCTACCCTGGTCTGG TGAGGACCTGGCGTGCTCCCTCTCGGCTTTGTTGGGATGCGAGGTCGATG GTCCACTGACGACTACGGCATGCACGACCCCCCCCACACTACCCACCACA GGGCGGTGGGATTCCAGGATCAGACGAATGCGCCATGTACTTCGTGAATT TCTCGTTAGACATCGCCATCGGCACGTTCATGATTTGGTGCTTCGTCAGG GTCCAGGAACTTACTGCGGTGCGATGCGGTATCGATAGCCTCAAGGTAAG CCACACAGCCTGCGCCACTGCCACAACCGTTGCCGCTGTTATGCTAATTC GACTGCAGTGACCGCTGCAAGTCGTAGCTGTTGGTTGCCGTTTCTATGGC CGCTATTTCTAGTAGTTCTACTGCAGCAGATGCTGGTGCGCAGTTTGCAG TGGGTATTCCTGATCTGAGCGATGACCACATTCGGCAGCATGTTTGGAGC CTACGGTCACCGCTATTTCATGTTATCGAGAACCCAACACTGAAAAAACT ACGGAGTACAAAGTACCGGTTGTGTGCAGGAATGTTGAGCACTTCGCAAA GGCTCTTCCCTCAAAACCGGACCCGAACGCGCTGGTGGGTCTTGCGATGG CAACATCATGCGCCTGCGGACGTATGCTACAGTCTGCCACGATGAAAAAA AATGTCCTAGTTGGTTGTGTTGTTGCTGGCTCTGATGTTTTTGCACACGC CACTTGTGCTTCAAGGCGTATCGAAGTGGAGTTGAGTTTGCATGAAAAGC GTGAGGCACGCAACAGCTGATCTAGCAGCCATCGCCGGTTCCACGTTCAC CGACGCTTGTTGCTGGAAAATGAACAGAAAGAAAGCTAAGATGAGAAGCA TACGTGGTTTCTCGCTACACCTTGTGTACGACTACGAGCCCAAGGTAAAG AGTACCTGGTATTTTTTTCTGTTGCACCTGGGAAGCCGCGTTGCTTTTCA CGTCAAATGGTCACGCTGTGCGTATGGACAACGCACTCTCTGAGCTCGTT CCCGTCTTGGATTTCCGGTATATCAGGTTACGGGGGACTACGGGACGCCG CCTCTCTTCTCGGTGTACAGGACACAGCTGCTGGCCTACACGGTAATCCT GGTGATCTGCAAGGCGGTGACGACGGCCATCGTGATCGCCATGGACGAGG TGCTTTCCTCCCTGGCTAAGGCCTTGTTCTCCCCCGTCAGCGCCTACCCG GAGCTGGAGCTTACTCTCGTGATGATCATCTGCCCTTGGTGAGCGCCTAC TACACGCTGATAGGTAGAGGTCCCTGTTTAGTGACGGTGTGCGCCCAGAA AATCCACGGCGCTATACCGGACCGGCACCATTTGAGAATATCTTGGTAAT TCAGGGTATGTCCGCCGGAACACAGGTACTATACGGGGCACCGGCACCAT TCGGGACCTCTTCCGTATTAGTGTTCAGCTTCCTTCGTTCGGATAGGTGG ATGTGTTGCTTAGCAGTGGGCGCGGCGTTGTTGTGGTGATGACGTCATGG TCGATGCGCGGGGACTACGCCACGCTCTAAAAAAGTCTTGATGTAGACAG CCGTAATGTACAAGGTGAAGGGAACTAGAACGCCCATCATTCAGGCATGT GTGTCGGTTGTTGTGTCCTCCTTTTGTATGAGAGTCAGCTATTCAGGCGG ATGGACAGCAGTGAGGGTCAATTCCTGTTCTGGCGGTGTTGATGCCATGC CCTTAGTCCTAATGTGTCCTGCGTAGGAGAGAGCACTATACTACTACTGC CAGGAGGAGGAGATGTCAGCGCTGCCACTGCTGTGGAGTAGTGTCATGGA TGTCCCCGTCCGACTGGAACTATTGATTCGTTTCGAGAGCTTCTCCCTAG CCTTCGATCAGATTCTAGCCGGGGAATATGAGGCCAGCTTTCATGGCAAA ACTGAAAGGTTCGAGGATGTACGCATGTACAAGACGTACATGCATTGCAG CGCTTGCCAGCACAAGTCGCCGACTCCCTCCATGCCGTGACCTCAGGATC CTCAACGCACTGCAATTCTGGATCTTGGACGACGTGCTCATGTCGGAGAA GGTCGTGCTGGACACGCGTTCGGGCTCATTCGGAAAGTGAGTTCTTGTTG TCTAGGCATTCGACAAACCGCTCGGATCTTTACCTAGAACCTCGTAACAG GTGTTATTATCTCCCACATTTCGGGAAAAACCGAAGAAACATGTCCTTGT AGGCGTTCCTCTCCGTTTCCGTGAAAGGAGGAGATTTATTATTTGTCCTT GTTCCTTTCATGACGGTTTCATGACGGACCGGGAAGGCGCGCTGCTGTAA CGCCACTGAGAACGCCAGCAAGACATGCCAGCTTACAGGCCAGGCTTGTT GCTGCTTTCCGTCCGTTATTTGTCCACGCCTGCGCGTTGTGCCTTCGTCT TCAATCGCCAGCATGTTTTGTTTTCTGGCAGAAATCACAAAGCACGGAAA CAGCAATAGTGACGAATGAGAAGTACAGCAGCAATTCTAAAAGCTCCATC CAACGTGCTGGTTCTTTTCGGAAATACACGTTCTCAACTAAAGAAAGGCT ACATACCCGTTCGACAAATATACAACCACAATTCTTTTGGTCCGGCTGTC CGCAATATGTGACACCCTCGCTCTCGGCGCTGCTGCTGGTGCTGCGCAAG AACGTATGACAGAGACGGATAGGATAGCACATGCCCAGAAAGCCGTTTGG AAATGACGCGGTGAGATAGGCTGTTTGGGTGGGAGATGTGAGGGCAAAAT GTCACGGTACCACGCTGCAGTAGAGTAGTGGGCCCTACAACGCGCTAAAA ACTTCGGATTGGTCATACAAGTATTGTCATAGATGCCGCACGAAAATGCC AGCCGCGAGGGACTCTTTTTCGTTTGGTCATAGACCAAATCCAAGTCTTG CCGGGCAATGAGCGTCGCACAGCCCAACCGCACGAACAAAGAGAATGTTG AAGGATATCTAGTGCTCCCCCCATATATATGTGTCTGTCACGTCTTGGTG GCGTAGTAAAATCCTGGTTTGGAAGATGAATGTTGTACGGTAGGACACAT TGACAGCATGGTGTGAACCTCTCCAGCAAAAAAAAAAATTGAGCTCTGGT TGGAAGACGAATGTTATACAAAAAGACACATTGGCAGCATGGTGTAAAAC TCTCCAGCGAAAAATTAGTTGAGCTCTGACAACACTTTCGTAACCCTACC CGTGACTTCCGTGACACTTGGTACCTGCAACCTATATGACACACCCTTTG GCAAAAATCACGCATGTTTTCTTACGGAGAGAATAGTACCACGCTTCTCA CACCGAAGACTTGACTTTACCGGTATGAATTCGTTCGATCGATCGGTTTG CTTATAAATTAACTCCGCACATGCGACGACGGCCACGACACATGGACGAC CTCCACACAGATTCCGCGCTGATGGTGACGACGCACTAATGCCGTTGGTA CATTACGGCTCAACGAGCAGATACGAACACATGGCGGACACGTCGGACGG CGCCGACAGGGGTAGAGGGGGGGGTGGCAGCGGCAGTCTAGACGCTTCTG GCCAAGACGCGTCGGAGAGGGATGGGTTGAACACGCCTACCGGGCTTCCT GCAGAACCTTCTTGGATGTCGGAGCCGGGGGGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGG GGGGGGATTATTGGGTGGAGAGAGGGGCTCCGAGAGCGAGGGGACGATGG GGGGGGGTCCAGAACAAGATCTATGTTTTGATAAGAGAATGGCTCAGTTT TGGCGTGGTGGGCGATCAGGATGCAAAGCTTTTGTTTTAGGAGGAACGGT TGGATGCCATGTCCAAGCTTTTGTTTTAGGAGGAACGGTTGGATGCCATG TCCTGTCTGTAATATTCCACTGGAGGGGGAGGATCGAGGGCGAGCAGTGC TGCACGCAACTCGCCCTCTGAAAATATGTGATTTTGAGTTTGTTGTTCTT GTGAATGTCGCGTGTGTGCAGCAAGTGTTGTAGGTGTTTGCACGGCTTTC TTTCTGCTGCCGGGACCTTCTGATCGAGAGACGAGGCAAAGTGACCGCAG GACCGATCTCGGTCAATTTTTTTGCTGTCCAAGTATGGTGTATCGGTAGA AGTTGTACCTCCGGGGATCAAGCTTTGGAGGGCATGTGTCTGGCGGTGTG CGAATTGGCAGCAACGGCTATCAGTTAGCAGGAGCAGCGACAGCTAGAAG TCGGGCTTGCTAGCAAACTGTGTGTGTGTGTGTAGCGTAGCTCTGACGGC ACGTTTTTTTGTTTCTTGTGCTGTTTGGGATACAACAGGGGGTGTGTGCA TATATTTCAGGAAATTCTCTGCTGCTCGTTCCTTGAAACGCCGGTGTGTT TGTGGTTTTCCTCTCTCGGGCAGGCGTCGTGGTTGGGGCCAATGTCATCG AAACCTGCTCGGCTCTGCTGCCGCAAAAGCTGTCTCCTTCTCTGCACGAA ACACATGTGCCAGAAAATCGCCTACTAAGGGGTAACTGCCATTCGTTGTT CAGTGTTGTTTTTCCAGTAGGCCACTTGTATCTCGCGTTGCCCAGGATAA ATACTTGCGGGTGGTAACGTTGACATTTGGTGTGCTTGGTTTTAGTTTGT ACTGGCTTTGTCTTTGTTTCATGCAAATTTATTACTAGAATCCTTCTTTT CTCATCTTTCTCCTCGCCTGCGTTGGCTTTTTTCGACCTT
back to top

Coding sequence (CDS) from alignment at Scaffold_70:31180..38619-

>EsuBft1074_6a-0001 ID=EsuBft1074_6a-0001|Name=EsuBft1074_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=717bp|location=Sequence derived from alignment at Scaffold_70:31180..38619- (Ectocarpus subulatus male Bft15b)
ATGCCTCATCCGCCGCCGCCTTATGGCTCGTTGCCACAAGGCGACGCAGA
GGGCTGCCATCTGATCTCGGAGAATTACGCGTATGCTCTTCAGTTTATTC
TGGGATTCGCTGCGTTAGCTGGTCTGGTGTTCAAGCGATGGCGGGCTCCG
GTGAAGCGCGACTTGGTGGTATGGATGTACGATGTTTCTAAGCAAGGCTT
CGGCGCGATGTTTATCCACGTGTGGAACATTCTCCTGTCGATACACGAGG
GCGGTGGGATTCCAGGATCAGACGAATGCGCCATGTACTTCGTGAATTTC
TCGTTAGACATCGCCATCGGCACGTTCATGATTTGGTGCTTCGTCAGGGT
CCAGGAACTTACTGCGGTGCGATGCGGTATCGATAGCCTCAAGGTTACGG
GGGACTACGGGACGCCGCCTCTCTTCTCGGTGTACAGGACACAGCTGCTG
GCCTACACGGTAATCCTGGTGATCTGCAAGGCGGTGACGACGGCCATCGT
GATCGCCATGGACGAGGTGCTTTCCTCCCTGGCTAAGGCCTTGTTCTCCC
CCGTCAGCGCCTACCCGGAGCTGGAGCTTACTCTCGTGATGATCATCTGC
CCTTGGATCCTCAACGCACTGCAATTCTGGATCTTGGACGACGTGCTCAT
GTCGGAGAAGGTCGTGCTGGACACGCGTTCGGGCTCATTCGGAAAAACGT
ATGACAGAGACGGATAG
back to top