Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7G3K6 |
ProteomeId | EsuBft1074_3 |
Protein domains | IPR026008 |
Protein domains | PF14681 |
Protein domains | PTHR10285 |
Protein domains | IPR029057 |
Owner | apollo_admin@sb-roscoff.fr |
Note | uracil phosphoribosyltransferase os:toxoplasma gondii gn:uprt pe:1 sv:1 [Automatic annotation] |
Nb exon | 8 |
Max annot lvl | 2759|Eukaryota |
Length | 2033 |
Hectar predicted targeting category | mitochondrion |
Evalue | 9.44e-219 |
EggNOG OGs | COG0572@1|root,KOG4203@2759|Eukaryota |
Ec32 ortholog description | Phosphoribosyltransferase-like |
Ec32 ortholog | Ec-19_005020.1 |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
KEGG rclass | RC00063 |
KEGG ko | ko:K00761 |
KEGG Reaction | R00966 |
KEGG Pathway | ko00240,ko01100,map00240,map01100 |
EC | 2.4.2.9 |
Description | UMP salvage |
COG category | F |
BRITE | ko00000,ko00001,ko01000 |
Cross References
External references for this mRNA
Database | Accession |
GO | 0006139 |
GO | 0005524 |
GO | 0044281 |
GO | 0031323 |
GO | 0005737 |
GO | 0004849 |
GO | 0008152 |
GO | 1901566 |
GO | 0016773 |
GO | 0044711 |
GO | 0044249 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1074_3a-0001 ID=EsuBft1074_3a-0001|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2033bp|location=Sequence derived from alignment at Scaffold_70:69641..75539+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTGGAATACCTTGCGATGAGCGCTACGCGGACGCTTCGTGCTGCTACTGC TGCTGGAAGGGGTTCCGCCCGAAGATGTCATTGCATAAGCGCAGCCTGGC CTCAGACGGGTGCAGTCATGGCGTCAAGGCGGGCTGCCTCGACGGGTGTG GGCATTGTGAGGACCAGGCTGAGAACAGCAGCACCACCGGATGAGGGAAG CAATGGGTCGGCGCTAGCGGCAGCGGCGGCGACATTAGCTGCCGCTTCGG CAGCAGCCGCAGCGTTGAACTCTTTCGGAGGCGGTAGCACCTCCGTGGTC GGGTGTTCCTTGGCGGATGGCGTCGACGCCCCCTACGAGCCCGGCCAGGC CGTTGGCGTGGGCATTAAGGCCGAGATGTGGAAGACCAAGCATCCGAACC TGACGATCCTTGAGACCATCGAGGACTCGCCGGTGCTGGGGTTGATGAGC GTCGTCCGGAACGTCGAGACCGATGGGGGCGCCTTCCTGTCTGCGGCCAA CAGGCTCATGCGCCAGCTGCTGGACTTCGCCGATATGGGGTTTCCCAACG ACGATGAGGCGGTGTTTGCCACCCCTGCGAGAGTTATGATGGCGGGCGTT CTGCCGGAAGATGACGTGAATGTGTGCGCCATTTCCCTGTACCTGGAGAA CGAGCCGTGCGGGGTATTCGACATGGAGCTGGACGCGGCGTTCCCGTCCT TCGAGAGGGGTTCCCTCCGAGTGAGGGGCCTCACACGGGGTTCTTCTAGG GAGCTTCCGCGGGACATGCAGGGGAAGCAGATATTGCTGCTAGCTCCCGT GGTCGGTTACGCCCAACCGGTATTGGCGGCCCTGGAGAGGCTGGAGCAGG CCGGTGTTGAAGACGAGAACGTTACTCTGGTTAGCGTTGTCATCAGCAAG GATGCCCTCGAGACGCTCACGGAGGAAGTGGAGGACATGAGAGTGGTGTG CTCAGCAATGGATGGCGAGACCCGAGGATCTGACCACCAGGTCGTCCCGG GAGTGGGAGATTTTTCGCGGCGCTACTTCGAAGCGAAAGCCATAGTGGAG GCGGAGGCGGCAGCGAGAGCCGCGGAACGATCCGCGGAATCTTCCTCAAA CGGAAAACGCCGCTGGTGGCGGCTGTGGTAGAGGAGCCGCCTGCCTTGTT ACTTGAAGCTGGGTTGGGTCAATAATAGGTTGCCGTTGGTCACGGCTGCT TTCCGAATTATTATTATATTTCTGTTTTTCATTCATCTCCCCAAGGAAAC GCAGGTAGGGTCGGGAGAACGTGGCAGTCCTTACTACTCCTAAGGAGCCA CGGGGCGAGAGGCACGTATGTGATTCTCGTGGCGCATGCTGAGTTGGGCT AGTAATACCTCGGTCGTATTGGTGATGACCTTCTGACCACAGCCGTGCTT TTGTGCGTGGTGTGCCTGCGTGTTGCGTCTTGTTTCGGAGTGTTCTCGGG TAACGATCCATAGAACGGACGTCAAGAAGTTTCGAGGAACGTTCCTCGTA ATTAACCGGGAAAGCGGGGTTTCGATTTCGGCGGTGGAGGTGCGTGGCTT GGGGGGGATAGATCGTTGGTGGTGGCAACACTTGAAATTCGTAGGGACGT GGGGAGTAGTGGGCTTGGTGCAATGGAACTCTGCGGACATTTGGTGTCGC TTGGGTTTTGTTTTTTTTACGTTCAAAGGGGTGTGTTCCTTTGCGTTGTT CAACACTGACGGCGCCCTTCCTTTTTCTGTCTCAGCGCTGTTTCATTTTC GAGAATAGAGTAGACGGTGGCCGACAAAGAGGACGGGACCTGCTAAATGT GGCGGGAAAAGAGAGACAAATATGTCGTGTCGAGAGCAACATGGAGGAGA ACCAAGCCATCGATAAGACTTAGGCGTGAGTACGTATTTTTTTTTTTTTT ATCGATGTGTGTCGTTATTCATCGGTCTACTTGGAACCAGGTGTTGTAGT GGAGAAGGGGGGTATTGGCGTGTGAACACGTTGAACCACAAAGTGATACT AGAAACCAATCCTCGCTTATGTTTTCTTCCCAG back to topprotein sequence of EsuBft1074_3a-0001 >EsuBft1074_3 ID=EsuBft1074_3|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=371bp
MSATRTLRAATAAGRGSARRCHCISAAWPQTGAVMASRRAASTGVGIVRT RLRTAAPPDEGSNGSALAAAAATLAAASAAAAALNSFGGGSTSVVGCSLA DGVDAPYEPGQAVGVGIKAEMWKTKHPNLTILETIEDSPVLGLMSVVRNV ETDGGAFLSAANRLMRQLLDFADMGFPNDDEAVFATPARVMMAGVLPEDD VNVCAISLYLENEPCGVFDMELDAAFPSFERGSLRVRGLTRGSSRELPRD MQGKQILLLAPVVGYAQPVLAALERLEQAGVEDENVTLVSVVISKDALET LTEEVEDMRVVCSAMDGETRGSDHQVVPGVGDFSRRYFEAKAIVEAEAAA RAAERSAESSSNGKRRWWRLW back to topmRNA from alignment at Scaffold_70:69641..75539+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1074_3a-0001 ID=EsuBft1074_3a-0001|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5899bp|location=Sequence derived from alignment at Scaffold_70:69641..75539+ (Ectocarpus subulatus male Bft15b) GTGGAATACCTTGCGATGAGCGCTACGCGGACGCTTCGTGCTGCTACTGC
TGCTGGAAGGGGTTCCGCCCGAAGATGTCATTGCATGTGAGGGGTTGAGC
AACAAGAGAGGGTTGTGAATCTCTGTCTCTTTGTGGTCGTATCTCGTAAC
TTTAGTTCCACCGCCATTTCCATACAACGTGCAACAACAGGCGATACACG
CGCATTGGGAACGTGCAATCGATGCAGGTAAGCGGCGCACACAGCTGGTA
AACTCGTAATGTTTCCTAGTAGAGGTCGCTGAGTGTCTTTTGGGAATCAA
AACACAGCAGGTACTATTCTAGCGCAGGCATCTCTTGCCTGCGTTCGTCA
TGAACCGCAGCAACCGAGACGCAAACGAGATCTGTACAGCGGGTTCCTCT
CCTTCCACATTTTCTGATGTGATGTGTTTGCATGGTTGTGCGCGAGACAA
CGAGGCGGTAGTAAGGTCCTCTGATTGTTGCTACTTTTGTCTCCAATGTA
TTGACTGCGGAATCGTCGCGATTGGTGCCCCTTCAACTCTACTCCTTGCC
GCCGCAATGAATGTCAACCAACCGTCTGTGCTGTCTGTCTTCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACCGCTGCT
GTTGTGCGTGTGTCGTTAGAAGCGCAGCCTGGCCTCAGACGGGTGCAGTC
ATGGCGTCAAGGCGGGCTGCCTCGACGGGTGTGGGCATTGTGAGGACCAG
GCTGAGAACAGCAGCACCACCGGATGAGGGAAGCAATGGGTCGGCGCTAG
CGGCAGCGGCGGCGACATTAGCTGCCGCTTCGGCAGCAGCCGCAGCGGTA
TGTTATCGATGAATCGCGTGTGCTGCGGCTTGTCCTCGAGGCGGCCCTGC
CTTCCATCGCTTGATAGCCGCTGTCTTTGGAAGTGGGGACGCCTCTACGG
CAGTACAGCATCTCGAGACCTAACTAAATCCCTTTTTCATCGTGCCTGCC
CTGCTGCTGTTGCCGCCTTCACCGCCGTTCACTTCAGTTGAACTCTTTCG
GAGGCGGTAGCACCTCCGTGGTCGGGTGTTCCTTGGCGGATGGCGTCGAC
GCCCCCTACGAGCCCGGCCAGGCCGTTGGCGTGGGCATTAAGGCCGAGAT
GTGGAAGACCAAGCATCCGAACCTGACGATCCTTGAGACCATCGAGGACT
CGCCGGTGCTGGTGCGTCATCGTTCTGCTGGGTCGGCGTGTATTGACTGT
GTGGGTTTAGACTGTGGACTGCCTTGTGTGTGTTGGTGTGTATTCTTTTG
TGTTTGCGACAAAGTTGGTGCCGGGGTTTCTTGCTCTCGAGAACGGCGTC
CGGAGACAAGAGAGCCAAGTCTGACATCGGAAGGAGTGAACGGTGTTCGT
ATGCATGATCCATAGGGAGGGACGTGCCAGCGCTAGTATGTCTATCGGTT
GGCCTATGTTAAATATTGTGCTTGTACCTTGTGTTCTGTAGAAAGAAAAA
ATGCCTCCGCGGGTGTTGCATTTTTTAGTGTCTCACAACACGTTTAAATT
CCTGGGCAAAGATAAGCAAGGGTTGAATGCCAGAATTATGTAAGAAAAGA
AAATGACAACACCAACAGCCACACCAACAACCACAACCACGTGAGACTCG
TGTTACTGCTGTACCCGCAAGCCATGGCGCTTGCAACCGTGCAAAAGTGA
TTTTTTTTAAATCTGTTTTTCCAACACATTGCTGGCTTGTCTGGATGATG
CAACAGGGGTTGATGAGCGTCGTCCGGAACGTCGAGACCGATGGGGGCGC
CTTCCTGTCTGCGGCCAACAGGCTCATGCGCCAGCTGCTGGACTTCGCCG
ATATGGGGTTTCCCAACGACGATGAGGCGGTGTTTGCCACCCCTGCGAGA
GTTATGATGGCGGTAAGCAGTCAGCAGAGAGAGAGAGAGAGAGATCAGTG
AGGGAATAGAGAGAAGAGAGGGAGAGAGGGAGAGAGGGAGGGACAACGAG
AAAAAGAGAGAAACAGACAGCCAGCCAAGACACACACAGAGGCAGAGAGA
GACCAGTGGGAGACAGGGAGAGAGAAACAGAGTGCAAGGCGAAAAACGCT
CATGTTTAAATGTACAGTACTTAAGGCAACAAAGGAAGCAACGAACGGTG
TTACTTGTTTGTATTTTTTTTCCTGCAGAACATTATTTTCCCTTCAACAC
TCCCGCTATCATATCACGGCGTGTGTATCGGTTGGTGTGTTGGTATCACG
CAAGTGTCTTGTTTCTTGCATCGCCGTTGAACATGATCGTACCCGCTGGC
GTATGCTGACGTCACCTTAACCTGACGGTAACAAGAAGCATACGCAGACG
CTTTTCGTTTAAGTGAGCGCAGCCAGTGTGTCACTTGGTAAGATACGACT
ACGAGCATGCTTGCACCCGAGACTGGGGGCATAGTGACTCATCCAGCGTT
TTTTCTTGTTGCCGTAAGCGTGGCGTTACATGTCTGGGGGGGCGTAACTA
CTTCACACATGAGTGCAACCCCCATGTGTGCCGACCACCAGCGGCGGTTA
CCTACTTACCGACGGCTCAGCCCGTCCAACTCGAAACGTCCACAATTATA
TTACATCGCATCTACGCATATCTGCCGTTTTGCAGAGCTTTAAGCTTCCC
TACGGCGCAGTCGGCCCAACTCGAAACGTTAACACTTACGCCGCACATCT
GCATATTTGCAGGGCGTTTAATCCCTGCTCGCCTCCTACGGTTCAGTCCG
TGCAACTCGAAACGTGAACAATTATACCGCAAATTTTGGCAGGGCGTTCT
GCCGGAAGATGACGTGAATGTGTGCGCCATTTCCCTGTACCTGGAGAACG
AGCCGTGCGGGGTATTCGACATGGAGCTGGACGCGGCGTTCCCGTCCTTC
GAGAGGGGTTCCCTCCGAGTGAGGGGCCTCACACGGGGTTCTTCTAGGGA
GCTTCCGCGGGACATGCAGGGGAAGCAGATATTGCTGCTAGCTCCCGTGG
TGAGCTTGCGGCTTGTTTCTTCGTTCTCTTGCTGAAGGCTGTGTGTTTTG
GTTGCTTTTGTGGTGGTTGTTCTCTGCTGGAGATTGCAGGTGCTACTTAC
CATAGATAGCTCCCGAGGTAGCGGTTTGGTTCCGCCTGTCCTCCAGATTA
GGGTTCCGGCGTTATTCTGCCGGGATTCGTTTGTACTGTGCTAATTTTTT
GTTGAGTGCCTGGTGTACGCTATATGTCGCACCTTCCGTGGCTGTTGACG
ACCGTCCCCACCTCTGGTGGTGTTGTCGATTTCAGTTGTACCTCAAGTGA
CACAAGATACCGCACCCCCTGGACCGTTTTCAACGCAAGACTGCTCCACG
ACGAAGAGGGTGCCAAAATCAAATGATACATTCCGGAAATATCTCGACGA
GACGGTTACAACGCCTCCCGCCATCATCTTCGGCGCCGCCATCGGTCTTT
GAAAATCGGTGCAGGGGGTGTGGTGTCTTATGTCATGTCACCTACGTACT
ACAAGGGTTGGTGACACGCTTCACCTTCCGGCGTCGAAATGTCGGGAGCT
AAACTACCGAACTATTCGTCCCGAAATAGTCGTTGTTGTTGTCATGATCA
AATGAAGAGCCGTTCCCAGGCCCCTTGCTCGGTACCTTGAAACATGCTCA
CGAACCGGTTCAACTGACGCGGGCGCCTTCAAATGACACGTTGATGTTTA
TTATGTTTGGAAAAGGTCGGTTACGCCCAACCGGTATTGGCGGCCCTGGA
GAGGCTGGAGCAGGCCGGTGTTGAAGACGAGAACGTTACTCTGGTTAGCG
TTGTCATCAGCAAGGATGCCCTCGAGACGCTCACGGAGGAAGTGGAGGAC
ATGAGAGTGGTGTGTAATTACATTGTAAATGTGTCGTGACGATAGTCTCC
ACTGAAGACGTGTTGAGAATCTTCAGACACGTGAAGGGCGGCCAGTTTTT
TTTTCTATCTGCAAGTGTTTTCAGAACACGGAGTAACACTCGATGGGGTG
TGGAATTCGTAGTGAATGGATGCCAAGAACGGGGGATGGGGTACTTGTGG
GTTAAGCTTGCCAGGATGAAAGCTTAAGCTACCATTTCGACCGATGCCTA
TTAACGTACGAACGCCGGACTTACATCATTAACCTCCCATATCGACCGAT
ACCTATCTACCATACGAACGCCGAACTTACGTTATTTCCGCTGTGAACGC
TACGGTTTAATTGCTGTTACTCGTTTTTCGCGACAGGTGTGCTCAGCAAT
GGATGGCGAGACCCGAGGATCTGACCACCAGGTATACGTGACTAAAAAAA
ACTTTTCTTCTTTTCTTTTTTGTGCCACATTTTCATGTCTTGGCGAAAAC
GAGCTGTATTTAAGAAATTGTACATATAAAATCAAAGAGAGCGTAGTGTA
CCTTGTTTCGGCGTGCGGTGTGTACCCTACTTGTCAATCTGCGTGTTTGC
CGGGTCATGTCCCGGTGACGCCTTCATGTGTAGGTGCGAGTTGGTGCCAC
CTAGCCCACAAAACGTGGTTTAGCTCTGTTGCTTCTGGCTTTCTTCTTTC
GCTGGCTTTACTCTCAAGCACGCCGAAAACGACCATCCACCTGTGACACG
AGATTCGGGCACATGAAGTGGGTGCGAATGTCATCAAACGACCGGTTCTC
ATCCCATTTGTGGGTCGATTGTGAAATTGCTATTAGCAATTTGCCAAACA
AGAGACCTTTCTAATTGTGCTGGTTACTCTTGTACATTTTTTTTTTTTTG
TTGAAGGTCGTCCCGGGAGTGGGAGATTTTTCGCGGCGCTACTTCGAAGC
GAAAGCCATAGTGGAGGCGGAGGCGGCAGCGAGAGCCGCGGAACGATCCG
CGGAATCTTCCTCAAACGGAAAACGCCGCTGGTGGCGGCTGTGGTAGAGG
AGCCGCCTGCCTTGTTACTTGAAGCTGGGTTGGGTCAATAATAGGTTGCC
GTTGGTCACGGCTGCTTTCCGAATTATTATTATATTTCTGTTTTTCATTC
ATCTCCCCAAGGAAACGCAGGTAGGGTCGGGAGAACGTGGCAGTCCTTAC
TACTCCTAAGGAGCCACGGGGCGAGAGGCACGTATGTGATTCTCGTGGCG
CATGCTGAGTTGGGCTAGTAATACCTCGGTCGTATTGGTGATGACCTTCT
GACCACAGCCGTGCTTTTGTGCGTGGTGTGCCTGCGTGTTGCGTCTTGTT
TCGGAGTGTTCTCGGGTAACGATCCATAGAACGGACGTCAAGAAGTTTCG
AGGAACGTTCCTCGTAATTAACCGGGAAAGCGGGGTTTCGATTTCGGCGG
TGGAGGTGCGTGGCTTGGGGGGGATAGATCGTTGGTGGTGGCAACACTTG
AAATTCGTAGGGACGTGGGGAGTAGTGGGCTTGGTGCAATGGAACTCTGC
GGACATTTGGTGTCGCTTGGGTTTTGTTTTTTTTACGTTCAAAGGGGTGT
GTTCCTTTGCGTTGTTCAACACTGACGGCGCCCTTCCTTTTTCTGTCTCA
GCGCTGTTTCATTTTCGAGAATAGAGTAGACGGTGGCCGACAAAGAGGAC
GGGACCTGCTAAATGTGGCGGGAAAAGAGAGACAAATATGTCGTGTCGAG
AGCAACATGGAGGAGAACCAAGCCATCGATAAGACTTAGGCGTGAGTACG
TATTTTTTTTTTTTTTATCGATGTGTGTCGTTATTCATCGGTCTACTTGG
AACCAGGTGTTGTAGTGGAGAAGGGGGGTATTGGCGTGTGAACACGTTGA
ACCACAAAGTGATACTAGAAACCAATCCTCGCTTATGTTTTCTTCCCAG back to topCoding sequence (CDS) from alignment at Scaffold_70:69641..75539+ >EsuBft1074_3a-0001 ID=EsuBft1074_3a-0001|Name=EsuBft1074_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1116bp|location=Sequence derived from alignment at Scaffold_70:69641..75539+ (Ectocarpus subulatus male Bft15b) ATGAGCGCTACGCGGACGCTTCGTGCTGCTACTGCTGCTGGAAGGGGTTC CGCCCGAAGATGTCATTGCATAAGCGCAGCCTGGCCTCAGACGGGTGCAG TCATGGCGTCAAGGCGGGCTGCCTCGACGGGTGTGGGCATTGTGAGGACC AGGCTGAGAACAGCAGCACCACCGGATGAGGGAAGCAATGGGTCGGCGCT AGCGGCAGCGGCGGCGACATTAGCTGCCGCTTCGGCAGCAGCCGCAGCGT TGAACTCTTTCGGAGGCGGTAGCACCTCCGTGGTCGGGTGTTCCTTGGCG GATGGCGTCGACGCCCCCTACGAGCCCGGCCAGGCCGTTGGCGTGGGCAT TAAGGCCGAGATGTGGAAGACCAAGCATCCGAACCTGACGATCCTTGAGA CCATCGAGGACTCGCCGGTGCTGGGGTTGATGAGCGTCGTCCGGAACGTC GAGACCGATGGGGGCGCCTTCCTGTCTGCGGCCAACAGGCTCATGCGCCA GCTGCTGGACTTCGCCGATATGGGGTTTCCCAACGACGATGAGGCGGTGT TTGCCACCCCTGCGAGAGTTATGATGGCGGGCGTTCTGCCGGAAGATGAC GTGAATGTGTGCGCCATTTCCCTGTACCTGGAGAACGAGCCGTGCGGGGT ATTCGACATGGAGCTGGACGCGGCGTTCCCGTCCTTCGAGAGGGGTTCCC TCCGAGTGAGGGGCCTCACACGGGGTTCTTCTAGGGAGCTTCCGCGGGAC ATGCAGGGGAAGCAGATATTGCTGCTAGCTCCCGTGGTCGGTTACGCCCA ACCGGTATTGGCGGCCCTGGAGAGGCTGGAGCAGGCCGGTGTTGAAGACG AGAACGTTACTCTGGTTAGCGTTGTCATCAGCAAGGATGCCCTCGAGACG CTCACGGAGGAAGTGGAGGACATGAGAGTGGTGTGCTCAGCAATGGATGG CGAGACCCGAGGATCTGACCACCAGGTCGTCCCGGGAGTGGGAGATTTTT CGCGGCGCTACTTCGAAGCGAAAGCCATAGTGGAGGCGGAGGCGGCAGCG AGAGCCGCGGAACGATCCGCGGAATCTTCCTCAAACGGAAAACGCCGCTG GTGGCGGCTGTGGTAG back to top
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