EsuBft1074_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft1074_2a-0001
Unique Name	EsuBft1074_2a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_70:89625..92244-
coding sequence from alignment at Scaffold_70:89625..92244-

spliced messenger RNA

>EsuBft1074_2a-0001 ID=EsuBft1074_2a-0001|Name=EsuBft1074_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2620bp|location=Sequence derived from alignment at Scaffold_70:89625..92244- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TAGCGTACTCGTTGGAGAGGGCATCCAACAAGAGGTGCAAAACGAAGGTT
TCGTTAACAAAGCCCCCGTTTCGAAAGGGACTCTGCGGTGGCGAGCATTG
AGAGCATGTTGCGGATTCTCTGCCATCGGGATCTTGTTGGATGTCAGGGA
TTTCAACTCATCCGCAGGCTGCATGGACGATTCTGGGTCGTACAACCCCT
TCAGCTCACGGAGCGCCCTCAGGGGCGACTCAGCTCGCTTCATTATTGTC
CTGTCTTTCTCGTCCTTGAGAGCTCCACGGAGGAAATTCCACGCGTGGAA
AGCGAGCTCTACTTTGTCGTGCGGGTAAAACCTGGACAGTTGGACCTTGC
TCTGCCCACTGTTAACGGGGATCTCCGCCCCCCCCTCCTCGTAAAGCTCA
AGAAGGTTTGCTGCGTTCGCTGCCATCAAAAAATCCTCTAGCCACGAAGA
AAACTCTTGGCGTCTCCGCTGAACGTGGGCGCTGTGTACTTCACGCTTTG
GTATCCCACGCTCGCACTACCGAAGACAGCAGCACCACTTCCCATGGCGC
TGCTGAAACAAGCTTGATTGTGAGCAGCGGCTACTCTCACCTCTTGGGGG
TCTGAACCCCCTACTTCGCCGCTGTGTCGTCCCGAAGGACCAGACTCTCG
TCGCAGGTCCGCTGCCTGCGCGCTCCCGTCGTACTGCACGGTCCCAAAAT
GACCTGCAGTGCTTGTGGCGACGCTCTCCACGGCGCCGCCGCTTTCAGCG
GCGCCCTCCGTGGCACCGCCGGACTTCTCCTCTATACGTGCAGCAAGTCC
TCCGACCAGCTGCACCAGCTGGCCCATTTGCTGTGTCAGCGAACTGATCT
CAGACCGCATGCTGTCGATCTGCTCGCTGCTATTGGTGTCTCCTGCCTGC
GAGCCGTCCGGAGTGGTCCCTCCGGTTCTGCGGCCCGCCATCCCTAATGG
ACTCCCTCGAGGGAATAAACACTAGTGTGTTGGTATGTCCGTACTTGGGA
GGAGAAGACACGCTTTAACTCTCTCTGATTAGGCACCCGCGGGAGCGAGG
AAAGGAAGGGAAGAAGTGGCCCTCCCGAATTCGGGGAAGGGGGCCCACAC
ATAGTAGCCTTTTTCAGGCATACGCATGCTCCTGTCTACGTACCCCCCCG
TGCTGCTAGCAGATCTACCATGCTCGTATCCAGACACACGAACAATCGCA
CTCGGTACAGTCGTTCTATTGCACAAAGAGAGGTTAGCGTGTGTGCATCG
CTGCGTGAGAGGGCTAGAATACCTCTCAGGAGCAGCAATTCCCTTTCTGG
CACCAGAAGCAGTGCCTCGATCGGGAGCCCTCTGATACTTGCTGATTCCA
CGCATTAGACCTCCACCGCTACGTGCTAACGACTCGTTACATGGTGTACA
ATCGATGAGCACGCACTCGCGTGCGTGTGAGTTCTGTTGTTATATGCTTG
TATCCCTTTGCCGCCCTGCTGCTTCGCTGTGTTCCCTTACAAAATCACGG
CCGGCTGCTGTGGCCGTTCCATGAAATTCGTCCTGTATTTGGCTCTGACC
AGGTGGCGCCTTGTGCGTCGGTCGCTTTGTGTTAACTTCCCCTCGGACCC
GGTTGCACCTTTCGCTGCAAGCTGCGGTTACAGTTCCTGCGCCTTTCGCG
GCATGTTGACTTTCCTTCTGTGCTCTTTGTCGCTCTTCACGCATTTCTGA
ACTACGCTGGGTGCGTACGGCGCAACTCGTACGCCGTGCACAGGGCGTTG
TTTTTCATCTTTTAACTCCTTGAAACGTTTGTTTCCCTTTGTCCCTCTAT
GTTCTTGGCTGTTGGTTAGCTGTGCGCCTGGTATGTGCGCCCCGCCGCGC
GTTGTTTTGTGGCATTGCGATGCACTTGGTGAGTGCGTCCTTCTAGGCCC
TATTTAGCATATGTTATTCTTGTTTATGTATTTGTCTTCCTTCATCTAAT
CGCTGTGAGCGCGTTTTATCTGTACGCCGTCGCTGCCGGTTGTGCGCGGT
TGCGTCTTGTGAATCCGGTGCGCCTTGCGTCGGCCGGGGCGCTGCTGCTC
GTACGAACGTCGCTGCTGTGCGTCTGCCACTTTCGATCGAAGCCGGCCCT
CCCCGAGCGCGCCATGTTCGCCGACGGGGGGGGGAGGTGCTTTCAGCACG
GGGGGAGTTGCCCCTAAACGCGGCAGTGGACACAGGGACCACGGCGAGCG
GTTCACCGGGCGCTATGCGTGCCGAAGGGCCCGGGTTTGCTCGTTCGACG
CCAGCAGGAGGATACCCTTTGGGGTCAGGTTCGGGAGGATCTAGAGAAGG
GTGCAGCTCAGGCTACGGTGTGGATGGTTGGGGGGTTCTGAGTTATGAGG
TTGAGAGCTGCAAGCCCAGGCTTCTGATGTCGACCCCCAAATGCATGGTG
GCCAATATTCTCGATGTAATCCACACATGACATGAACTACAAGAGTCAGA
CTACCGTTGTCACGAATTCGTGATTACTTCATTGACCCGAATCCGATTCC
GGCCGCTCTAGCGACTTTTGGCCAGAGCCACTGGGCACCTTGAGTGTTCC
TTTCGATGCTTTGGGAGGAAACGCACGTCTCACGTGTGATGTTCTTTTTC
TTTGGTTTCTTGCAACCCGT

protein sequence of EsuBft1074_2a-0001

>EsuBft1074_2 ID=EsuBft1074_2|Name=EsuBft1074_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=111bp
MLRILCHRDLVGCQGFQLIRRLHGRFWVVQPLQLTERPQGRLSSLHYCPV
FLVLESSTEEIPRVESELYFVVRVKPGQLDLALPTVNGDLRPPLLVKLKK
VCCVRCHQKIL

mRNA from alignment at Scaffold_70:89625..92244-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1074_2a-0001 ID=EsuBft1074_2a-0001|Name=EsuBft1074_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2620bp|location=Sequence derived from alignment at Scaffold_70:89625..92244- (Ectocarpus subulatus male Bft15b)
TAGCGTACTCGTTGGAGAGGGCATCCAACAAGAGGTGCAAAACGAAGGTT
TCGTTAACAAAGCCCCCGTTTCGAAAGGGACTCTGCGGTGGCGAGCATTG
AGAGCATGTTGCGGATTCTCTGCCATCGGGATCTTGTTGGATGTCAGGGA
TTTCAACTCATCCGCAGGCTGCATGGACGATTCTGGGTCGTACAACCCCT
TCAGCTCACGGAGCGCCCTCAGGGGCGACTCAGCTCGCTTCATTATTGTC
CTGTCTTTCTCGTCCTTGAGAGCTCCACGGAGGAAATTCCACGCGTGGAA
AGCGAGCTCTACTTTGTCGTGCGGGTAAAACCTGGACAGTTGGACCTTGC
TCTGCCCACTGTTAACGGGGATCTCCGCCCCCCCCTCCTCGTAAAGCTCA
AGAAGGTTTGCTGCGTTCGCTGCCATCAAAAAATCCTCTAGCCACGAAGA
AAACTCTTGGCGTCTCCGCTGAACGTGGGCGCTGTGTACTTCACGCTTTG
GTATCCCACGCTCGCACTACCGAAGACAGCAGCACCACTTCCCATGGCGC
TGCTGAAACAAGCTTGATTGTGAGCAGCGGCTACTCTCACCTCTTGGGGG
TCTGAACCCCCTACTTCGCCGCTGTGTCGTCCCGAAGGACCAGACTCTCG
TCGCAGGTCCGCTGCCTGCGCGCTCCCGTCGTACTGCACGGTCCCAAAAT
GACCTGCAGTGCTTGTGGCGACGCTCTCCACGGCGCCGCCGCTTTCAGCG
GCGCCCTCCGTGGCACCGCCGGACTTCTCCTCTATACGTGCAGCAAGTCC
TCCGACCAGCTGCACCAGCTGGCCCATTTGCTGTGTCAGCGAACTGATCT
CAGACCGCATGCTGTCGATCTGCTCGCTGCTATTGGTGTCTCCTGCCTGC
GAGCCGTCCGGAGTGGTCCCTCCGGTTCTGCGGCCCGCCATCCCTAATGG
ACTCCCTCGAGGGAATAAACACTAGTGTGTTGGTATGTCCGTACTTGGGA
GGAGAAGACACGCTTTAACTCTCTCTGATTAGGCACCCGCGGGAGCGAGG
AAAGGAAGGGAAGAAGTGGCCCTCCCGAATTCGGGGAAGGGGGCCCACAC
ATAGTAGCCTTTTTCAGGCATACGCATGCTCCTGTCTACGTACCCCCCCG
TGCTGCTAGCAGATCTACCATGCTCGTATCCAGACACACGAACAATCGCA
CTCGGTACAGTCGTTCTATTGCACAAAGAGAGGTTAGCGTGTGTGCATCG
CTGCGTGAGAGGGCTAGAATACCTCTCAGGAGCAGCAATTCCCTTTCTGG
CACCAGAAGCAGTGCCTCGATCGGGAGCCCTCTGATACTTGCTGATTCCA
CGCATTAGACCTCCACCGCTACGTGCTAACGACTCGTTACATGGTGTACA
ATCGATGAGCACGCACTCGCGTGCGTGTGAGTTCTGTTGTTATATGCTTG
TATCCCTTTGCCGCCCTGCTGCTTCGCTGTGTTCCCTTACAAAATCACGG
CCGGCTGCTGTGGCCGTTCCATGAAATTCGTCCTGTATTTGGCTCTGACC
AGGTGGCGCCTTGTGCGTCGGTCGCTTTGTGTTAACTTCCCCTCGGACCC
GGTTGCACCTTTCGCTGCAAGCTGCGGTTACAGTTCCTGCGCCTTTCGCG
GCATGTTGACTTTCCTTCTGTGCTCTTTGTCGCTCTTCACGCATTTCTGA
ACTACGCTGGGTGCGTACGGCGCAACTCGTACGCCGTGCACAGGGCGTTG
TTTTTCATCTTTTAACTCCTTGAAACGTTTGTTTCCCTTTGTCCCTCTAT
GTTCTTGGCTGTTGGTTAGCTGTGCGCCTGGTATGTGCGCCCCGCCGCGC
GTTGTTTTGTGGCATTGCGATGCACTTGGTGAGTGCGTCCTTCTAGGCCC
TATTTAGCATATGTTATTCTTGTTTATGTATTTGTCTTCCTTCATCTAAT
CGCTGTGAGCGCGTTTTATCTGTACGCCGTCGCTGCCGGTTGTGCGCGGT
TGCGTCTTGTGAATCCGGTGCGCCTTGCGTCGGCCGGGGCGCTGCTGCTC
GTACGAACGTCGCTGCTGTGCGTCTGCCACTTTCGATCGAAGCCGGCCCT
CCCCGAGCGCGCCATGTTCGCCGACGGGGGGGGGAGGTGCTTTCAGCACG
GGGGGAGTTGCCCCTAAACGCGGCAGTGGACACAGGGACCACGGCGAGCG
GTTCACCGGGCGCTATGCGTGCCGAAGGGCCCGGGTTTGCTCGTTCGACG
CCAGCAGGAGGATACCCTTTGGGGTCAGGTTCGGGAGGATCTAGAGAAGG
GTGCAGCTCAGGCTACGGTGTGGATGGTTGGGGGGTTCTGAGTTATGAGG
TTGAGAGCTGCAAGCCCAGGCTTCTGATGTCGACCCCCAAATGCATGGTG
GCCAATATTCTCGATGTAATCCACACATGACATGAACTACAAGAGTCAGA
CTACCGTTGTCACGAATTCGTGATTACTTCATTGACCCGAATCCGATTCC
GGCCGCTCTAGCGACTTTTGGCCAGAGCCACTGGGCACCTTGAGTGTTCC
TTTCGATGCTTTGGGAGGAAACGCACGTCTCACGTGTGATGTTCTTTTTC
TTTGGTTTCTTGCAACCCGT

Coding sequence (CDS) from alignment at Scaffold_70:89625..92244-

>EsuBft1074_2a-0001 ID=EsuBft1074_2a-0001|Name=EsuBft1074_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=336bp|location=Sequence derived from alignment at Scaffold_70:89625..92244- (Ectocarpus subulatus male Bft15b)
ATGTTGCGGATTCTCTGCCATCGGGATCTTGTTGGATGTCAGGGATTTCA
ACTCATCCGCAGGCTGCATGGACGATTCTGGGTCGTACAACCCCTTCAGC
TCACGGAGCGCCCTCAGGGGCGACTCAGCTCGCTTCATTATTGTCCTGTC
TTTCTCGTCCTTGAGAGCTCCACGGAGGAAATTCCACGCGTGGAAAGCGA
GCTCTACTTTGTCGTGCGGGTAAAACCTGGACAGTTGGACCTTGCTCTGC
CCACTGTTAACGGGGATCTCCGCCCCCCCCTCCTCGTAAAGCTCAAGAAG
GTTTGCTGCGTTCGCTGCCATCAAAAAATCCTCTAG