|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1061_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Length | 128 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1061_4a-0001 ID=EsuBft1061_4a-0001|Name=EsuBft1061_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1281bp|location=Sequence derived from alignment at Scaffold_172:37099..39779+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGACAACTTCATCTCCGCCGTCGCGCAGCTCAAAGCCACCGAAGACAC
CAAGTATGACGCGCTATACCTCAACACCCCGTGGAACAAACTGACCGTGG
AACAGATGGGAAAGATCGATCTTCCATCTCTCACCAAAGACGAAGCCCTG
ATGTACATGTGGGCCGACACCTACAGCATCAAGTCTTCCGTGGAGCTGCC
GTTGAAAGCCGCGGGCGAGGCCGGTGCAACCTCGGTCGCCGATGCGATGC
ACGGCGACGATAACGACGGACCGTCGCCGCCGCCGGTCGAAAGCCCGGAG
GCGGCGGCCGTCAACAAGGCCGTCGTGAAAACTACCACGAAGCGCGCCAA
GAAGCAGAGGTGCCCTCATCTAACGCTCCCCAGGGGGACCAAGGACTGGG
ACCTTCCGAGCTTGACTACAGCAGCAGGACTGGACGACAGCTCGGACGAC
GACAGCTCGGACGATGACAGCTCGGAAGGCAACGGCAACGGTGACAATGG
AGCTTTGGACACCGTGTCACCACAAGCCTTGCCGGATGGGTCACTGGTCG
GGGGTGGGGGGGGTGGCCCCGGAAGCGGCTTGCACTTGCAGCCTGGGTGG
TTTGCCGTTTTCCCTTTGGAGTTGTCGAATCCGTGCCCGCTGGTTGTTGG
CAAAATAGTTAGTGTGGACTTGAGCGCGGGAAACGGGGGTGAGTTAACCG
TCACTTGGTTTTCGCCTGCTTCTCGCAAGAAATGCCGTCGGTCGAAGTAC
GGGAGGGGCGTATGGTCGCAAGAGTTCTTGAAGGAGGGCAATAAACTCAC
AGCGGATCAGGGCACGGAGTCGGTGAAAGCTGTATATGGCGTGCTCACCA
ACGCCTCGTCTATGCCTGGCGACACCCCAGCGAGCGAACGCGGCGGAACC
ACGATCGACACGCGCGTGACGGAGCTGTCCACGATGCTGGAGAAGCAAAG
CAAGGTACTGTCGACTGTCATGCAGAAGAAGCTAGGGAAACTTCAGATGC
CGCCTGCCAGGGCGGCGGGGGCAGAAGAGGGGGAGTCAAGCTGCGCCGGC
AACGCCGCATGGCGCGGAGGAGCCGCGCCGGGCACACGGTTTGGGTTGCC
ACCCTGTGGAGTCGGGGGAGTAGGTCCCCTGGGCCACCCATCCGCTGGTC
CCCCGCTGGGAAGCAATGCGCAGGGAGTTTGGATGCAGGGGGTGATGGAC
AAGATATCATCGCTGCTGCAGGCAATGCCTAGGGGGGCCAGGCGGTGCTG
GAAGACGCGCCGCATCCTGCGGTGGGATTGN back to topprotein sequence of EsuBft1061_4a-0001 >EsuBft1061_4 ID=EsuBft1061_4|Name=EsuBft1061_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=427bp
MDNFISAVAQLKATEDTKYDALYLNTPWNKLTVEQMGKIDLPSLTKDEAL
MYMWADTYSIKSSVELPLKAAGEAGATSVADAMHGDDNDGPSPPPVESPE
AAAVNKAVVKTTTKRAKKQRCPHLTLPRGTKDWDLPSLTTAAGLDDSSDD
DSSDDDSSEGNGNGDNGALDTVSPQALPDGSLVGGGGGGPGSGLHLQPGW
FAVFPLELSNPCPLVVGKIVSVDLSAGNGGELTVTWFSPASRKKCRRSKY
GRGVWSQEFLKEGNKLTADQGTESVKAVYGVLTNASSMPGDTPASERGGT
TIDTRVTELSTMLEKQSKVLSTVMQKKLGKLQMPPARAAGAEEGESSCAG
NAAWRGGAAPGTRFGLPPCGVGGVGPLGHPSAGPPLGSNAQGVWMQGVMD
KISSLLQAMPRGARRCWKTRRILRWDX back to topmRNA from alignment at Scaffold_172:37099..39779+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1061_4a-0001 ID=EsuBft1061_4a-0001|Name=EsuBft1061_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2681bp|location=Sequence derived from alignment at Scaffold_172:37099..39779+ (Ectocarpus subulatus male Bft15b)
ATGGACAACTTCATCTCCGCCGTCGCGCAGCTCAAAGCCACCGAAGACAC
CAAGTATGACGCGCTATACCTCAACACCCCGTGGAACAAACTGACCGTGG
AACAGATGGGAAAGATCGATCTTCCATCTCTCACCAAAGACGAAGCCCTG
ATGTACATGTGGGCCGACACCTACAGCATCAAGTCTTCCGTGGAGCTGTA
AAAGCTTCAGGGTTTCAAGTTCCACTCGGTGTACCAGATCTGTGATGTCG
CCACCTACCCCGCACCCGAACCCAGGCCGTTGAAAGCCGCGGGCGAGGCC
GGTGCAACCTCGGTCGCCGATGCGATGCACGGCGACGATAACGACGGACC
GTCGCCGCCGCCGGTCGAAAGCCCGGAGGCGGCGGCCGTCAACAAGGCCG
TCGTGAAAACTACCACGAAGCGCGCCAAGAAGCAGAGGTGCCCTCATCTA
ACGCTCCCCAGGTACTGGAAACATGTCACGCCCAAGGGTTCCACGCGCCC
GACGACGGAGTTTCTCTTGCTCGGTTACAAGGGTGGTCGGCCCCCCCTTT
CCAGCTGAAGGACATCGACAAGGCTACCCTCGACAAAATACAGCAACGCT
ACGACTTTGTGCACCCGAGGTTGGAGGCCTTGTATCCCGACGGTGAGACC
TTGTGCTGTTGGAATCGTAGGTTGGGAAAACTTGGGTGTGCAACCTCATG
TATGTCGTGGTCTTCCCTGAGCCCACGCTTTATTGTAGTAAGCCGAAGTG
ACTTTTTTTGGCGGATCCAGTCGTTATTGTTCTACTCCCCTTCAGAAATT
GAAAACCTAAGTTGTTGATGTTCTTTCACGTGCATAGGATTTCTGTCGTC
GGTCTGTACTCTATGTACTCTGTGTTTACAAGTTACGACAAAACACCCAA
CCAAGGTTTTCCTATCTTCTCGATTTTGCCGGGGGTGTAGAGCACAATCG
ATCTCGCCAACCAAATTCAGAAGTGTTTCTAATTTTCATACCTGGGCGAG
AGTGATAGGGTGCACGCAGCTCAAAGAACGGTCTTGCCTAATTGGCCACG
ATGAATGTTGTTCCGTTTGCCCTTCTTATCCCCCGTCGTGAACCGTTCAT
GCACACACTTAAACCCTATCCCTACTCGTGCGGATGTCCTTCGTTCTGTC
GATACAGATCCTGCGAAACGAAACGAGTCCATTCGCGGGATGAACCTCTC
TGTTCAGCTGCTGCGTGAAAGGGGGACCAAGGACTGGGACCTTCCGAGCT
TGACTACAGCAGCAGGACTGGACGACAGCTCGGACGACGACAGCTCGGAC
GATGACAGCTCGGAAGGCAACGGCAACGGTGACAATGGAGCTTTGGACAC
CGTGTCACCACAAGCCTTGCCGGATGGGTCACTGGTCGGGGGTGGGGGGG
GTGGCCCCGGAAGCGGCTTGCACTTGCAGCCTGGGTGGTTTGCCGTTTTC
CCTTTGGAGTTGTCGAATCCGTGCCCGCTGGTTGTTGGCAAAATAGTTAG
TGTGGACTTGAGCGCGGGAAACGGGGGTGAGTTAACCGTCACTTGGTTTT
CGCCTGCTTCTCGCAAGAAATGCCGTCGGTCGAAGTACGGGAGGGGCGTA
TGGTCGCAAGAGTTCTTGAAGGAGGGCAATAAACTCACAGCGGATCAGGG
CACGGAGTCGGTGAAAGCTGTATGTTTCACTTTCCCTTCCTTGCTGCAGA
GTGGGAAGCTGCCAAGTGCGGTGTGGGACGCGGTTGAAGAGAGCGTACCC
ACCTCCTCTCTCGAGGAAAGTGATTCCGANCTCCACTATGTATGTTTTAT
GCACCCTGCATCTCTACCGCCGAAAATGCTCCGGAAACACCTCAAAGTTA
TGATATGGCATTGAATCTCTCAACGTTTCATATCACACCCTCTCCCGGAT
TATCACCGAAGCTATACTTCCTTCTACTTTCCTCCTGAAAACACGTTCCG
TCTGTCTCCCGTGATGTTTTTCGCCATGGCAACAACAGGTATATGGCGTG
CTCACCAACGCCTGTATGAACTATTTCTGCCCGCGGTTACCCCCCGAAAG
CGCATTCGATCATAACTAAATCCAAAGGGTGAACACAAGACGGGGGTGGT
GTTCATTCCCATTTCAAAATTAGTTCCCATTTTTCTCGCAACCTTGTTAA
GCATCTAAACATCAAGCACTACAGTCTCTACAAAGACAACAAGGGCATAA
TACCACTTAGGGTTGACGCATACTCTTGAGTTTCCTTTGAAGGAGCCCCT
TTGTAGCGTCTATGCCTGGCGACACCCCAGCGAGCGAACGCGGCGGAACC
ACGATCGACACGCGCGTGACGGAGCTGTCCACGATGCTGGAGAAGCAAAG
CAAGGTACTGTCGACTGTCATGCAGAAGAAGCTAGGGAAACTTCAGATGC
CGCCTGCCAGGGCGGCGGGGGCAGAAGAGGGGGAGTCAAGCTGCGCCGGC
AACGCCGCATGGCGCGGAGGAGCCGCGCCGGGCACACGGTTTGGGTTGCC
ACCCTGTGGAGTCGGGGGAGTAGGTCCCCTGGGCCACCCATCCGCTGGTC
CCCCGCTGGGAAGCAATGCGCAGGGAGTTTGGATGCAGGGGGTGATGGAC
AAGATATCATCGCTGCTGCAGGCAATGCCTAGGGGGGCCAGGCGGTGCTG
GAAGACGCGCCGCATCCTGCGGTGGGATTGN back to topCoding sequence (CDS) from alignment at Scaffold_172:37099..39779+ >EsuBft1061_4a-0001 ID=EsuBft1061_4a-0001|Name=EsuBft1061_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1281bp|location=Sequence derived from alignment at Scaffold_172:37099..39779+ (Ectocarpus subulatus male Bft15b)
ATGGACAACTTCATCTCCGCCGTCGCGCAGCTCAAAGCCACCGAAGACAC
CAAGTATGACGCGCTATACCTCAACACCCCGTGGAACAAACTGACCGTGG
AACAGATGGGAAAGATCGATCTTCCATCTCTCACCAAAGACGAAGCCCTG
ATGTACATGTGGGCCGACACCTACAGCATCAAGTCTTCCGTGGAGCTGCC
GTTGAAAGCCGCGGGCGAGGCCGGTGCAACCTCGGTCGCCGATGCGATGC
ACGGCGACGATAACGACGGACCGTCGCCGCCGCCGGTCGAAAGCCCGGAG
GCGGCGGCCGTCAACAAGGCCGTCGTGAAAACTACCACGAAGCGCGCCAA
GAAGCAGAGGTGCCCTCATCTAACGCTCCCCAGGGGGACCAAGGACTGGG
ACCTTCCGAGCTTGACTACAGCAGCAGGACTGGACGACAGCTCGGACGAC
GACAGCTCGGACGATGACAGCTCGGAAGGCAACGGCAACGGTGACAATGG
AGCTTTGGACACCGTGTCACCACAAGCCTTGCCGGATGGGTCACTGGTCG
GGGGTGGGGGGGGTGGCCCCGGAAGCGGCTTGCACTTGCAGCCTGGGTGG
TTTGCCGTTTTCCCTTTGGAGTTGTCGAATCCGTGCCCGCTGGTTGTTGG
CAAAATAGTTAGTGTGGACTTGAGCGCGGGAAACGGGGGTGAGTTAACCG
TCACTTGGTTTTCGCCTGCTTCTCGCAAGAAATGCCGTCGGTCGAAGTAC
GGGAGGGGCGTATGGTCGCAAGAGTTCTTGAAGGAGGGCAATAAACTCAC
AGCGGATCAGGGCACGGAGTCGGTGAAAGCTGTATATGGCGTGCTCACCA
ACGCCTCGTCTATGCCTGGCGACACCCCAGCGAGCGAACGCGGCGGAACC
ACGATCGACACGCGCGTGACGGAGCTGTCCACGATGCTGGAGAAGCAAAG
CAAGGTACTGTCGACTGTCATGCAGAAGAAGCTAGGGAAACTTCAGATGC
CGCCTGCCAGGGCGGCGGGGGCAGAAGAGGGGGAGTCAAGCTGCGCCGGC
AACGCCGCATGGCGCGGAGGAGCCGCGCCGGGCACACGGTTTGGGTTGCC
ACCCTGTGGAGTCGGGGGAGTAGGTCCCCTGGGCCACCCATCCGCTGGTC
CCCCGCTGGGAAGCAATGCGCAGGGAGTTTGGATGCAGGGGGTGATGGAC
AAGATATCATCGCTGCTGCAGGCAATGCCTAGGGGGGCCAGGCGGTGCTG
GAAGACGCGCCGCATCCTGCGGTGGGATTGN back to top
|