EsuBft1052_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1052_6a-0001
Unique NameEsuBft1052_6a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_352contigScaffold_352:407406..415817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FL94
ProteomeIdEsuBft1052_6
Protein domainsIPR018935
Protein domainsCoil
Protein domainsIPR011009
Protein domainsIPR018934
Protein domainsG3DSA
Protein domainsIPR000687
Protein domainsPTHR10593
Ownerapollo_admin@sb-roscoff.fr
Noteserine threonine-protein kinase rio1 os:dictyostelium discoideum gn:rio1 pe:3 sv:1 [Automatic annotation]
Nb exon11
Max annot lvl2759|Eukaryota
Length2315
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGsCOG1718@1|root,KOG2270@2759|Eukaryota
Ec32 ortholog descriptionRIO-like kinase
Ec32 orthologEc-15_004790.1
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameRIOK1
KEGG koko:K07178
KEGG Pathwayko03008,map03008
GOsGO:0000003,GO:0001932,GO:0001933,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0007548,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008406,GO:0009791,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0014013,GO:0014015,GO:0016070,GO:0016072,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022613,GO:0023051,GO:0023056,GO:0023057,GO:0030154,GO:0030490,GO:0030684,GO:0030688,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036093,GO:0036211,GO:0040026,GO:0040028,GO:0042127,GO:0042254,GO:0042274,GO:0042325,GO:0042326,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043409,GO:0043412,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045137,GO:0045595,GO:0045597,GO:0045935,GO:0045936,GO:0046483,GO:0046578,GO:0046579,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051056,GO:0051057,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051960,GO:0051962,GO:0060251,GO:0060252,GO:0060255,GO:0060284,GO:0061062,GO:0061063,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090069,GO:0090070,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1990234,GO:1990904,GO:2000026,GO:2000232,GO:2000234
EC2.7.11.1
Descriptionpositive regulation of rRNA processing
COG categoryDT
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Cross References
External references for this mRNA
DatabaseAccession
GO0031227
GO0005524
GO0005515
GO0005737
GO0007059
GO0007096
GO0000462
GO0004674
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1052_6aEsuBft1052_6aEctocarpus subulatus male Bft15bgeneScaffold_352 407406..415817 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1052_6a-0001EsuBft1052_6Ectocarpus subulatus male Bft15bpolypeptideScaffold_352 407406..415776 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1052_6a-0001-exonagat-exon-109338Ectocarpus subulatus male Bft15bexonScaffold_352 407406..408212 -
EsuBft1052_6a-0001-exonEsuBft1052_6a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_352 408482..408637 -
EsuBft1052_6a-0001-exonagat-exon-109339Ectocarpus subulatus male Bft15bexonScaffold_352 409019..409186 -
EsuBft1052_6a-0001-exonagat-exon-109337Ectocarpus subulatus male Bft15bexonScaffold_352 409690..409818 -
EsuBft1052_6a-0001-exonagat-exon-109340Ectocarpus subulatus male Bft15bexonScaffold_352 410471..410641 -
EsuBft1052_6a-0001-exonagat-exon-109341Ectocarpus subulatus male Bft15bexonScaffold_352 411439..411567 -
EsuBft1052_6a-0001-exonagat-exon-109344Ectocarpus subulatus male Bft15bexonScaffold_352 411889..412011 -
EsuBft1052_6a-0001-exonagat-exon-109346Ectocarpus subulatus male Bft15bexonScaffold_352 412431..412664 -
EsuBft1052_6a-0001-exonagat-exon-109345Ectocarpus subulatus male Bft15bexonScaffold_352 413774..413873 -
EsuBft1052_6a-0001-exonagat-exon-109343Ectocarpus subulatus male Bft15bexonScaffold_352 414256..414467 -
EsuBft1052_6a-0001-exonagat-exon-109342Ectocarpus subulatus male Bft15bexonScaffold_352 415732..415817 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1052_6a-0001-cdsEsuBft1052_6a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_352 407406..408212 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1052_6a-0001-exonagat-five_prime_utr-319Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_352 415777..415817 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1052_6a-0001 ID=EsuBft1052_6a-0001|Name=EsuBft1052_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2315bp|location=Sequence derived from alignment at Scaffold_352:407406..415817- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GCTAGCTACGCAGGAGCAGGGGGAGAGAGAGGAAGAGAGTCATGGCGACT
TTCGGGACTTCGGAGTCCAAGCGCTTGCGATTTGTGAACCAGTTCGAGGA
CGCCAGCGACGACGATGATGACGACACGACAACGACCGCCGCTGCCGCTG
CCAGCACCACCGGGGAGGGGTCCAGCAGGACGCAGGTGCCGGCCAAGGCC
AAGAACAACAACAACAGGAGCAAGGGCAACAAGAAAAGCGGTGCCGACAG
GGCGGCAGCGTCGCTGTTCTTCAGCGACAGCACCGCTCCTCGCCACAGCG
GCGAACGCTTGTCGGCGGCGGACGGGTTGGACTCCGCTGAGTGGGAAGAG
GCGGTTTGGTCTGGAAGCGATGGCGGCGACGAACTGGACCAGCTGGAGAC
TACGTTGCTTGGGGAGGTTGGCGGCGCGGGAGCCGCAGGCAGTCGGGGTG
GAGAAGCCCTGAGAAGCAGGTTCGAAAGCAAGCTCAACACAGCCTCCCGC
GATGGGGGCGGGGGAGGGGAAGGAGGGGGTCCTCAGTCCCAGTCTGTCCG
TAACGACATCAAGAGGAGCGAGAAGTCGGGGGAGAAGACTTCGCGGCATA
CTGGGAGGGACGACCGTGCCACAGTCGAGCAGGTTATGGATCCGCGTACC
CGGATGATCCTCTTCAAGCTGCTGAACCATGGGTTCTTCAGGCAGATCGA
CGGCTGCCTTAGCACGGGAAAGGAGGCAAACGTTTACTACGCCGTCGGCG
GAGAGGGCAAGGAGTACGCGATCAAGGTGTACAAGACGTCCATCTTGGTG
TTCAAGGACAGGGACAAATACGTGTCCGGGGAGTACCGTTACAGGCACGG
CTACTGCCGCTCCAACCCGCGGAAGATGGTGAAGGTGTGGGCAGAGAAGG
AGATGAGAAACCTCAAGAGATTGGTCGCTGCGGGCATCCCTTCCCCCGCA
CCCGTGCTCATCAAGAACAACGTCCTGGTCATGGACTTCCTGGGGAAGGC
GGGCTGGCCGGCGCCCCGGTTGAGGGATGTTCAGCTTGGACCCAAGAAGA
TGAAGGACGCGTACATCCAGTGCGTGATCGGCATGCGCAACATGTACCAG
AAGTGCAGGCTGGTGCACGGGGACCTGAGCGAGTACAACCTCCTCTACAT
GGAGGGCCTGCTGATCTTCATCGACGTCTCGCAGTCGATGGAGAATGACC
ACCCCCGGGCCATGGACTTCCTCCGCATGGACTGCCGGAACGTTACCGCG
TTCTTCAAGAAGAAGGGGGCACAGCCGGCCTCGGCTCGATCCCTCTTCGG
CTTCGTCATCGACTCCGACCTGCAGGAGGACCGGCAGGAAGAACGGCTGA
AGGAAGTGCTGGAGAAGGAGTTCGACGAAGCAGAGGCGTTTGAAGATGAG
AGCAAGAACGGGGGCGGCAAGAGCGAGAAAGGCGCGGAGCTGGCGGCCGA
GCTAGAGATCCAGGACGCCGTGTTCATGAGCTCCTACATCCCTAGGAGCC
TACACGAGGTGGACAACGTCGAGGATCGACAGAACCGAATACAGCAGGAG
CAGCGAGAGGGGGGCAAGGGAACAGCCTACGCCATCGCGGTCACCCACAT
GCTCAAGCAAGACCCGAAGAAAGACAAACACCCTGCCATCAACGACTCGA
TCTCCACGCCATCAAATTCCGTCACCGCTCCGGCGGCGGCGGTGGGTAAC
CCCTCCGGGAGGCATACTAAGCACTCTCTCAAGGCTGGCAGTGCTGCTGA
TTCGTTATCGGGGAGTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCG
TCGTCGTTGATACAGCGGGCAGTGGCGGTGACGGTGGTGCGCCGGTGGCG
GGGGGTCAGCAGAGCGGAGTTGTGTCTGAGGGCGGGGGTGGTGGTGGTAA
GGCGGGGGTGCAGTTCGTGGGCGTGAGAGAGGAGGACGGGGGGCGAAACG
GCGATGCCGCTGGTGCTGCCGCCATAGTGGTGGTCGAAGAGGATAGCGTT
AGCGTTAGCGTTGTCGCCGGCGGTGATGGTGCTGGGAGCGACGGGGACGC
TAGCAGCAGTGACGGTTACACTAGCAGTGGCGCAGACATGTCGGGGAGCG
ATGACTTCGAAGACGATGACGAGGAGGAGGGACAGGGAGAGGGGCACACG
AGGCGGAACTGGGCGGAGCGGAGAGCGAGACTTCGGAAGGACGGGATGCA
CGGGAGGAGGCTGCCGCCGCCGCAGGCAGAGGAAGAGAGAGCAACCGCGA
AGGCCGAGAAACGCGAGGTGATTTCACGTCACTTCAAGTCACTTCAATTC
ACTTCACTTCATTGA
back to top

protein sequence of EsuBft1052_6a-0001

>EsuBft1052_6 ID=EsuBft1052_6|Name=EsuBft1052_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=757bp
MATFGTSESKRLRFVNQFEDASDDDDDDTTTTAAAAASTTGEGSSRTQVP
AKAKNNNNRSKGNKKSGADRAAASLFFSDSTAPRHSGERLSAADGLDSAE
WEEAVWSGSDGGDELDQLETTLLGEVGGAGAAGSRGGEALRSRFESKLNT
ASRDGGGGGEGGGPQSQSVRNDIKRSEKSGEKTSRHTGRDDRATVEQVMD
PRTRMILFKLLNHGFFRQIDGCLSTGKEANVYYAVGGEGKEYAIKVYKTS
ILVFKDRDKYVSGEYRYRHGYCRSNPRKMVKVWAEKEMRNLKRLVAAGIP
SPAPVLIKNNVLVMDFLGKAGWPAPRLRDVQLGPKKMKDAYIQCVIGMRN
MYQKCRLVHGDLSEYNLLYMEGLLIFIDVSQSMENDHPRAMDFLRMDCRN
VTAFFKKKGAQPASARSLFGFVIDSDLQEDRQEERLKEVLEKEFDEAEAF
EDESKNGGGKSEKGAELAAELEIQDAVFMSSYIPRSLHEVDNVEDRQNRI
QQEQREGGKGTAYAIAVTHMLKQDPKKDKHPAINDSISTPSNSVTAPAAA
VGNPSGRHTKHSLKAGSAADSLSGSTSAAAAAAAAAVVVDTAGSGGDGGA
PVAGGQQSGVVSEGGGGGGKAGVQFVGVREEDGGRNGDAAGAAAIVVVEE
DSVSVSVVAGGDGAGSDGDASSSDGYTSSGADMSGSDDFEDDDEEEGQGE
GHTRRNWAERRARLRKDGMHGRRLPPPQAEEERATAKAEKREVISRHFKS
LQFTSLH
back to top

mRNA from alignment at Scaffold_352:407406..415817-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1052_6a-0001 ID=EsuBft1052_6a-0001|Name=EsuBft1052_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=8412bp|location=Sequence derived from alignment at Scaffold_352:407406..415817- (Ectocarpus subulatus male Bft15b)
GCTAGCTACGCAGGAGCAGGGGGAGAGAGAGGAAGAGAGTCATGGCGACT TTCGGGACTTCGGAGTCCAAGCGCTTGCGATTTGTGGTCAAGGCAAGTGC CACATGAAGACACGACATCCGTATGAACCGTTGTTTTGAATGCCGAAAAC CAAGCTTTTCCGCTGGTCCCGGTTTGACACAGGTCTCCATCTCCCAAGGG GCAAGATCTCAGCAGTGCCTGCATGGCCAGCGGCTCCCGAGCTCGGCCAT CACCTCCACCGTATTTTCCGTAACATGTTGCACCTTCTGAATCTCTTGAG TCCTGTAATTCTGGAAGCAGGGAGCGTATGGGGGCACCAAGTCACTAGCC ATGTGGACTCTGTCCGCTAGCAATCCCACCGCTGGCGGCCACCCATTACT TTGGTTTGGGGGCTGTCTCTCACGCCTGCACGCTCCCCCGTGCATCACGT AGCACAACACAACACAACTCCCGTTGTCCGTCCTGTTTATCTATGGGGCA GGGCTGCTGGTGGGCAGCCTCGATTCTGCTGCATGCTGTAAGTTGATGGA GGCTAAAGTCCACACGAACACACCCACTGGAACTTTACGGGACTGTCAGA TTCTGTGATGCCATCGTGCCATCATCCTCGTACTACAGCAGTATATTTGT ACCGCAGTCTTACGTGTATGGTGTACAATAGCAGGTTACCTGTATACTTC TTTTTCGTTGTGTGTCCAGTAACTGCGGTATTATCTGGGTGCAAATGTTC GCAACGTACATCTGGAGACGAAACCCTCGTATCATAGTGCCCGACATTCA GTTCTCTTCATCTACAGAAGTGGTACAGATTTTTTTCGCGCGAAAAGACA AAGTCAACGTCAACTCGGCGCACGCACGCAGCTTTCACTATGCCGCTTCT GTACCGCCTGTTCTTGCTGTGTTGAGCCCTGGAACGCTAGCGACGATTGT GCGTCCTTTTCTTATCGAGCTGCCGCTGTGTTATTAACGATACCAGCATG ACCAGTCGCCGGGTGGCATTGCGATATTCGTACCGTAGGTCTGCCTGGGT GGCGGCGGGTACCCTCACCCCTGCCACCAGTCAAGATCGTTCGTGACACG TTGGGTAGATATATGCACACATGTATACGGCGTCCGGAAGTGACGGTTAA GCAGTGCGGCAGTACAGGTAGATCAAATGAACAAAAACGTAACAAACAAA ACAACACATTCCACGCATGTATACACAATCGTGATGAAACATGTCCGCGT TGAGCATACAGCAATCTCTTTATGTGTTCATACATCGACCCACATTCGAC CAACAAGTCGAATTGGACGATCCCTTTCTCGCACCTCTGGTGTACTGCAG AACCAGTTCGAGGACGCCAGCGACGACGATGATGACGACACGACAACGAC CGCCGCTGCCGCTGCCAGCACCACCGGGGAGGGGTCCAGCAGGACGCAGG TGCCGGCCAAGGCCAAGAACAACAACAACAGGAGCAAGGGCAACAAGAAA AGCGGTGCCGACAGGGCGGCAGCGTCGCTGTTCTTCAGCGACAGCACCGC TCCTCGCCACAGGTGATTGGCCACGCCGCATGTGGTTGTAGTTGCTGCCG TTGATGTCTTCCTTGAGGGAATAACCACACGCTAGCTGAGAGTGAATGGT TCTGGCTGGAGGGTTTCGACAGCTGTTTTTCAACAAGATAGTTTTGGACA ACTATTTTTCAGCACACACGAACGCGGGCTGTTTTTCAAGGCCGACGTGC CATGACCCCAGATCCAACCGGATGCTTCACTCCAAGCGCCCTAGCAGAAG AGTGCCATCACCAACTGTGATGCCAATACAGTTTGTTGGTTGGAACCCAC ACGCAGGCATCGCGTGCTGCGATTACCACTTTCTCATGACATGCGTGCTT GTTCTTGTTCGGTCGCGGTGGGTCTCCACTGTTGTTGTTGCCAGCGGCGA ACGCTTGTCGGCGGCGGACGGGTTGGACTCCGCTGAGTGGGAAGAGGCGG TTTGGTCTGGAAGCGATGGCGGCGACGAACTGGACCAGCTGGAGGTGTGT CAGTTGTTGTTATATCGGTTGTTGTGGTTGTTTTCGTGGTGAAGGTGGTG GATGTGGTGCTTGTTGTCATCCTTGTTGTTACATTGGCGATGGCCGTTGT CGCCGCTCTTTTTCATTGGTGGTGGCTGTAGTTGTCGTCGCTGTTGTTCT TGTTCTTGTTTCGTGCACGTTGTCACCCGTTCTGTTCCTTTCCAGCAGTG TTGTCGTCTCGCGGTTTCCAACCAACCTTTTCTCGAAATACAAGGTGTTT AGCCGTGAGGGTGGGTTGTCTTGTATTGTATTGTCATGTCTTGTCACCGC AATGTTCCATCGAAAAGTGGAAATCGAAATGCCACTGGTCTATCACTGAT TGGACAGCGGACCCCTGTTCCGCCGCCGGATGTTCGACATGGAGGATTGT GGTCGAAAGCTAAGCGATTGATGGAAAAATCAATAAGAGAATCTGAATAG ATCGAAATCTCAAATCGAAAGCGTGAACAGGAACATGAAGTTGTTGCTTA CCCAGCTTGTTACCAGACTCCCTGCAAGTCGGAAATGCCTTCATTTCGCT ACTCATCCTAACCACCTACAGACTGCTTGGCGATGCAAGAGATACCTTTG CAGAAAGCTGACATCCAGCAGAGCACGGCATACTTCTTTGAGCAAGACCT GCTCGAAATTGGGAGAGAAAGAGTCATCGCCGTGAAATTATTTATTTGCC AACCGCGTCATTTTCGGCTTTCCTGCATCAGACCGAAGTATTCAGTCACA CATTGGTCGCTGAGTTCCTAGCGTATCGGTGCGAGATCAAGATTTGCCAA CCCGCCTGATCACCGCTAGCTGTGTGGGATGCCCTGTGGCTCTTACGGTC GGGTGCTTTGAGGCATTTTTCGTGTCACCCGTGTTGTTTTCCACTTTCGA TTTTGATTCATCACCATGGGTGTCCGAGTAGAGCCAACCCGAAAACGAAT TTCTTTCAGATCTGGAAATCTCTGGTGACAAGACCCACCCTGAAAACCGC AACTGCAGAAGTGCATGCGTCTATTGTGGTAGCATCTCACGAGAACTTTC CCTTCGCTCTCGTCCTCCATTGCTGTATCCCCAATAAATGTGTTGGTTTC CAGACTACGTTGCTTGGGGAGGTTGGCGGCGCGGGAGCCGCAGGCAGTCG GGGTGGAGAAGCCCTGAGAAGCAGGTTCGAAAGCAAGCTCAACACAGCCT CCCGCGATGGGGGCGGGGGAGGGGAAGGAGGGGGTCCTCAGTCCCAGTCT GTCCGTAACGACATCAAGAGGAGCGAGAAGTCGGGGGAGAAGACTTCGCG GCATACTGGGAGGGACGACCGTGCCACAGTCGAGCAGGTGAAGAGTGGAC AGAGCTTTTCTACTACAGAAAAAATAGGTGTTGCTGTTTGAAGTTTTGGG GGATGCGCATCGCATTGGATGACCGCGCCATTCCGTATGGTGCGATTCGA CAGTTTCGTTTACCCAGGTACTGTACCGTGGCTCCGTAGGTTGGCCGTAT CCCTCTGAGGGTGAGGTGCTACAAGCGGTTTCGATTCGACGCCCCCGCGA TATCACATGCCATCCATGAGTTGCCTCCCTCCTCTGCCTTGACGTTTCCC CCATGAGGTGGCGGCATGCTCTACGAGATGCTTGAGATTGTTGGCAACTT CCTCTCCCCCTGTGTCCCCCCCCCCCCGTCCCTCCCTCTCTCTCTCTCGG TCTGCTTCTACTTGGCGTGGCTTTTTTTTCTTTTTTTCTCTGTCATGTAC TTGTAGGTTATGGATCCGCGTACCCGGATGATCCTCTTCAAGCTGCTGAA CCATGGGTTCTTCAGGCAGATCGACGGCTGCCTTAGCACGGGAAAGGAGG CAAACGTTTACTACGCCGTCGGCGGAGAGGTCAGATCTCCGAGATCTCCG AAATGACCCGGCTCGTTCCATAGGTTTTGATGGAAAACTTGATGGAACCA ACATTTGTATGAACCTTAATTGCGGAAGTCAACGTTTTCGATTGGCAGGC ACAACTTGGTAGACTGCGTGGTGTGGCAGGGTTGGAGTGACGCCTTATCT CTGCCTATCCCGGCGCTTTTCGGCTTGGGAGACTGCTGTAGTCACGTCGT TTGCGCGGTCTCAGTACGGGAAGGTACCGATACACTGCCCGTTGCCGTCG GCGGTTCTGCTCACCCCTTCTGCTGCGCACCTCGTTTCACGTGTTTCCAG GGCAAGGAGTACGCGATCAAGGTGTACAAGACGTCCATCTTGGTGTTCAA GGACAGGGACAAATACGTGTCCGGGGAGTACCGTTACAGGCACGGCTACT GCCGCTCCAACCCGCGGAAGATGGTGAAGGTGCGTTCGGTGTGCGGTGTC CCGCGTCCCGTGTACAGTGTATCTTGGTCTCCAAGGGTAGAGACAAGTAC GTGTGCGGAGAGTACCGCTACAGGCACGGTTGCTGCCGCTCCAAGCCGCG GAAGATGGTGAAGGTACGCCCCGTGCACCATGTCCCATGTACTGTGCTCC GTGTCATGCGTGTGTTGGGTCGACGGATGAGGAATGGTTCGTTGGTCACG TTACTGGGAGACTATACTGGTGTGTCCTTGCGTTGCCATGGTGTCTGGTT CCTTAGGTGAAAAATGTTTTTTGTGTTGAAAATGTTTTTTGACAATATTT TTTCAATAGAAAATGCTACCGTTTAGAATCGACTCATTGTCTGCTGTGCA AGGTTTGCGTTGAACAATGCAAGGTCCACGTTGAACAATGGGAGCCGCAG GCCTATCTACTTTACAGGCAAACTGGCCTCAAGCCGGCCTTTTCAAGGGT TTAGTAGGATGCCACGCAGGCATGACGACACGCAATAGCGTGTGCCAACT CAACTCCTCGAGCGAAATTTTCGTAGACTGTCAGGGCCAAATATGCCCTT GGAAGCGCTTTCGCGCACTTCCTTCGTTACGCGCGCACCGACGGCATGTA CATCTTTAGCAGGGGGTACATGATATACGCACCTGTGGGATGTGGGAATT TTCTTATTTATTGTATTACGACTATGCAGACGTTTTAGTTGTCTTCGCCT GCACTTTGTTGTCGTGCTTTCGTGCCCTTCCCCCCATTCTTTGCGTATTT CTTGTCGTGTTCCTTGGCGTGGTCAGGTGTGGGCAGAGAAGGAGATGAGA AACCTCAAGAGATTGGTCGCTGCGGGCATCCCTTCCCCCGCACCCGTGCT CATCAAGAACAACGTCCTGGTCATGGACTTCCTGGGGAAGGCGGGCTGGC CGGCGCCCCGGTTGAGGGATGTTCAGCTTGGACCCAAGAAGATGAAGGTA ACGTTCTTAGTGGACCACTCGCACAGTCTTTTTGAATGTTAGGGGGGGTC CACTTTCTCTTGGTCCTAGGAGCTTTTGAAGGTAGGGATATGAACCACGG GAGAGTTTTCTCTTCAGACTGACATGTACACACAACCGTTGCAACTAAGG AGGGAGAAACTACTGAAACGGAAAAAAAAAAAAAAGGAGAGGATGATCAC CCCGCAGAGACAGGGTCCGTGACTGTTGCTGCACTGAACTTCTGACGGCA TATTGTTGTCCGTCATTGACGGGACAGTAGTAGTGCACAGCTTCCACCTT GTGCCTGTCAAGGAGCATCAAACGAGCACGAGGTCACGCCATGCTGTGAT GAGCTTTATTTCTCACACGCAAGTATCATACGACCTATTACAGGTGTCGA CCAAACGGCAACACCACGACCAAGAGGGAGGATGTAACTGATCGGAAACC AGAGAGGAGGCCGCTCGTGGCTACTATAGGAACGTTTTGGTTCTCTGGGT TCGAAGTCTGCCTGACCTCCTCTTCAGTGAACCACAGTGTGCTTAATTAG TTGGCTTCGACCGCTCTAACCGACTGGCCAATGACAAGCAGTCGATCGGT CTGAATTGCGGCATGGATACCGCGAAAACTCACCATGTTTCGTCCACAGG ACGCGTACATCCAGTGCGTGATCGGCATGCGCAACATGTACCAGAAGTGC AGGCTGGTGCACGGGGACCTGAGCGAGTACAACCTCCTCTACATGGAGGG CCTGCTGATCTTCATCGACGTCTCGCAGGTGTGTGTGTGTAGTCGCAGGT GTGTGTGTAGACTCAGCACACGGGCGTTGCTTGTCGCGCGCCTGACTGCA ATTGCTGTGGATGACACGAGGCACACTGTTGTACTAGGTGCAGCAGTCCT GCTGAGAGTGACGGCGCGTGTGTTGTAGCTGTGCATGTAACGGGTGTCGC TACTAGCAGAGTGCTGGGGTCGTATACTGTACGATGGTTTCGTCGTGGCC CTCATCCGTTGCCATTTTTTTTTTAGCTTTCGAAGGACATGAATGACCCT CGGTCCACAGAGTCTGTTCTACGCCCATTCCTCAGACCATGCTATTTTTT TCGTCCTATTGCCCATATTCAGTTTGTCCCCGTTTGATTCATCTTGGCAG GTGTGGTATCCCTGTACAATATGAAGCATGCAGCAGGAAGGACTCTTCCG ACAGTCTGGATACTCTATCCTATTTCCCAGTTTCTCGTTTTGGTTTTCTC ATCTCGTTCGGTATTTGTTTTCGAATGGCAGTCGATGGAGAATGACCACC CCCGGGCCATGGACTTCCTCCGCATGGACTGCCGGAACGTTACCGCGTTC TTCAAGAAGAAGGGGGCACAGCCGGCCTCGGCTCGATCCCTCTTCGGCTT CGTCATCGACTCCGACCTGCAGGAGGACCGGCAGGAAGAACGGCTGAAGG TGTGACGGCGGTGTTGCGGCAGCGGTGTGGATGGAGTGATGGTGTGGGTC GGGGTGTATAGGGAAGCTGCTGATGGTTCATACCGGTAGTGTCAAAGCGG GGCTCGTATTGCGTGGCAGTCTACGGATATTTGCTCAGCTGTGTCTCCCT GACGCAGACTAGGAAAAGAATTGGACGGTTTGTTATTGAGGCTATTAGTT TTGGTAGTTGTCCACAGGTTTGTTCCCGGGGACCTGACGAGAGGCGTTGC TTTAACATTTACCTCGAAGTCACCATACAGTCGCGATTAGACCACCAGAC CCACCACCAGCAGTCACCAATCGACGGCGGACATGCCAACAACAATGATC AAACTCCACAATCCGAACGCGGCTCTGTAGGAAGTGCTGGAGAAGGAGTT CGACGAAGCAGAGGCGTTTGAAGATGAGAGCAAGAACGGGGGCGGCAAGA GCGAGAAAGGCGCGGAGCTGGCGGCCGAGCTAGAGATCCAGGACGCCGTG TTCATGAGCTCCTACATCCCTAGGAGCCTACACGAGGTGGGAAGTTGTTG CTATTGCTATTGCTGTTGTTGGTGATGGTTTCTCGATGATGACGATAGCG TTGTTAGTGTTTGCCTCTGCTGCTGTTGCAAGATGTCGTTCTTGTTCCTA TTGTCGTGGTTGTTGTCATTTTTTATGCTATGCTCGTGTTGCTGCTGCTG CTGTTCTTACTACAGTACCTTCGCGTCGGTTGTTGCTGCTACTGTTGCTG TTGCTGCTGCTGTTGCTGTTCAACACGGTGCGTTCATCTTGCTTGACTAA TTCAGGTGGACAACGTCGAGGATCGACAGAACCGAATACAGCAGGAGCAG CGAGAGGGGGGCAAGGGAACAGCCTACGCCATCGCGGTCACCCACATGCT CAAGCAAGACCCGAAGAAAGACAAACACCCTGCCATCAACGACTCGATCT CCACGCCATCAAATTCCGTCACCGCTCCGGCGGCGGCGGTGGGTAACCCC TCCGGGAGGCATACTAAGCACTCTCTCAAGGCTGGCAGTGCTGCTGATTC GTTATCGGGGAGTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCG TCGTTGATACAGCGGGCAGTGGCGGTGACGGTGGTGCGCCGGTGGCGGGG GGTCAGCAGAGCGGAGTTGTGTCTGAGGGCGGGGGTGGTGGTGGTAAGGC GGGGGTGCAGTTCGTGGGCGTGAGAGAGGAGGACGGGGGGCGAAACGGCG ATGCCGCTGGTGCTGCCGCCATAGTGGTGGTCGAAGAGGATAGCGTTAGC GTTAGCGTTGTCGCCGGCGGTGATGGTGCTGGGAGCGACGGGGACGCTAG CAGCAGTGACGGTTACACTAGCAGTGGCGCAGACATGTCGGGGAGCGATG ACTTCGAAGACGATGACGAGGAGGAGGGACAGGGAGAGGGGCACACGAGG CGGAACTGGGCGGAGCGGAGAGCGAGACTTCGGAAGGACGGGATGCACGG GAGGAGGCTGCCGCCGCCGCAGGCAGAGGAAGAGAGAGCAACCGCGAAGG CCGAGAAACGCGAGGTGATTTCACGTCACTTCAAGTCACTTCAATTCACT TCACTTCATTGA
back to top

Coding sequence (CDS) from alignment at Scaffold_352:407406..415817-

>EsuBft1052_6a-0001 ID=EsuBft1052_6a-0001|Name=EsuBft1052_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2274bp|location=Sequence derived from alignment at Scaffold_352:407406..415817- (Ectocarpus subulatus male Bft15b)
ATGGCGACTTTCGGGACTTCGGAGTCCAAGCGCTTGCGATTTGTGAACCA
GTTCGAGGACGCCAGCGACGACGATGATGACGACACGACAACGACCGCCG
CTGCCGCTGCCAGCACCACCGGGGAGGGGTCCAGCAGGACGCAGGTGCCG
GCCAAGGCCAAGAACAACAACAACAGGAGCAAGGGCAACAAGAAAAGCGG
TGCCGACAGGGCGGCAGCGTCGCTGTTCTTCAGCGACAGCACCGCTCCTC
GCCACAGCGGCGAACGCTTGTCGGCGGCGGACGGGTTGGACTCCGCTGAG
TGGGAAGAGGCGGTTTGGTCTGGAAGCGATGGCGGCGACGAACTGGACCA
GCTGGAGACTACGTTGCTTGGGGAGGTTGGCGGCGCGGGAGCCGCAGGCA
GTCGGGGTGGAGAAGCCCTGAGAAGCAGGTTCGAAAGCAAGCTCAACACA
GCCTCCCGCGATGGGGGCGGGGGAGGGGAAGGAGGGGGTCCTCAGTCCCA
GTCTGTCCGTAACGACATCAAGAGGAGCGAGAAGTCGGGGGAGAAGACTT
CGCGGCATACTGGGAGGGACGACCGTGCCACAGTCGAGCAGGTTATGGAT
CCGCGTACCCGGATGATCCTCTTCAAGCTGCTGAACCATGGGTTCTTCAG
GCAGATCGACGGCTGCCTTAGCACGGGAAAGGAGGCAAACGTTTACTACG
CCGTCGGCGGAGAGGGCAAGGAGTACGCGATCAAGGTGTACAAGACGTCC
ATCTTGGTGTTCAAGGACAGGGACAAATACGTGTCCGGGGAGTACCGTTA
CAGGCACGGCTACTGCCGCTCCAACCCGCGGAAGATGGTGAAGGTGTGGG
CAGAGAAGGAGATGAGAAACCTCAAGAGATTGGTCGCTGCGGGCATCCCT
TCCCCCGCACCCGTGCTCATCAAGAACAACGTCCTGGTCATGGACTTCCT
GGGGAAGGCGGGCTGGCCGGCGCCCCGGTTGAGGGATGTTCAGCTTGGAC
CCAAGAAGATGAAGGACGCGTACATCCAGTGCGTGATCGGCATGCGCAAC
ATGTACCAGAAGTGCAGGCTGGTGCACGGGGACCTGAGCGAGTACAACCT
CCTCTACATGGAGGGCCTGCTGATCTTCATCGACGTCTCGCAGTCGATGG
AGAATGACCACCCCCGGGCCATGGACTTCCTCCGCATGGACTGCCGGAAC
GTTACCGCGTTCTTCAAGAAGAAGGGGGCACAGCCGGCCTCGGCTCGATC
CCTCTTCGGCTTCGTCATCGACTCCGACCTGCAGGAGGACCGGCAGGAAG
AACGGCTGAAGGAAGTGCTGGAGAAGGAGTTCGACGAAGCAGAGGCGTTT
GAAGATGAGAGCAAGAACGGGGGCGGCAAGAGCGAGAAAGGCGCGGAGCT
GGCGGCCGAGCTAGAGATCCAGGACGCCGTGTTCATGAGCTCCTACATCC
CTAGGAGCCTACACGAGGTGGACAACGTCGAGGATCGACAGAACCGAATA
CAGCAGGAGCAGCGAGAGGGGGGCAAGGGAACAGCCTACGCCATCGCGGT
CACCCACATGCTCAAGCAAGACCCGAAGAAAGACAAACACCCTGCCATCA
ACGACTCGATCTCCACGCCATCAAATTCCGTCACCGCTCCGGCGGCGGCG
GTGGGTAACCCCTCCGGGAGGCATACTAAGCACTCTCTCAAGGCTGGCAG
TGCTGCTGATTCGTTATCGGGGAGTACTTCCGCCGCCGCCGCCGCCGCCG
CCGCCGCCGTCGTCGTTGATACAGCGGGCAGTGGCGGTGACGGTGGTGCG
CCGGTGGCGGGGGGTCAGCAGAGCGGAGTTGTGTCTGAGGGCGGGGGTGG
TGGTGGTAAGGCGGGGGTGCAGTTCGTGGGCGTGAGAGAGGAGGACGGGG
GGCGAAACGGCGATGCCGCTGGTGCTGCCGCCATAGTGGTGGTCGAAGAG
GATAGCGTTAGCGTTAGCGTTGTCGCCGGCGGTGATGGTGCTGGGAGCGA
CGGGGACGCTAGCAGCAGTGACGGTTACACTAGCAGTGGCGCAGACATGT
CGGGGAGCGATGACTTCGAAGACGATGACGAGGAGGAGGGACAGGGAGAG
GGGCACACGAGGCGGAACTGGGCGGAGCGGAGAGCGAGACTTCGGAAGGA
CGGGATGCACGGGAGGAGGCTGCCGCCGCCGCAGGCAGAGGAAGAGAGAG
CAACCGCGAAGGCCGAGAAACGCGAGGTGATTTCACGTCACTTCAAGTCA
CTTCAATTCACTTCACTTCATTGA
back to top