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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FM20 |
ProteomeId | EsuBft1051_4 |
Protein domains | Coil |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 5 |
Max annot lvl | 2759|Eukaryota |
Length | 213 |
Hectar predicted targeting category | other localisation |
Evalue | 0.0 |
EggNOG OGs | 2ENCT@1|root,2SRUE@2759|Eukaryota |
Ec32 ortholog description | hypothetical protein |
Ec32 ortholog | Ec-01_010340.1 |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1051_4a-0001 ID=EsuBft1051_4a-0001|Name=EsuBft1051_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2130bp|location=Sequence derived from alignment at Scaffold_614:24515..28731- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCATGTAGAGAGTGCCTCGGGTCAGGTCTCATCGAGTAACGCCCCCGT GCCCGCCGATGGAGAGTGGGCAGAACAAATCAGAGTCAAGGACGAGCTGA TCTCTACGTTGAGACGGCAGCTGACGGCGCTGGGGGAGCAACCGGTTGAA GAGGTTGTAACCCTAGAGGAGGCGAAGAAGCGTTTACGAGAGGCTATTGA CGCCCTGATGACGGGGGACACGTCTGCCGAAATGGAGCTCGCCCTGGAAA AATGGGACAAATATGTCACCAACCACCCCGATCACATCAAAGAGCAGGCC GCCGAAGAGCAGGCATGGGAAGCAGCAAATGAGCAAAAAAACAACGAGGC GCTCCATCTTATGAAGACTTTCGTTCCGCCCGACATCTTTCACGCTGGCC TTGACGGTCTACGGGGAGGGGGGCTGACGCCGGCGCTCGCAAAGAGGATA TTCGATCGCAAGGTTCTCTGGCTCATTCGCGCGCCAATCGGAATGGTGTC AAAAACTCACGTGGTGGAGTTGAAGAGTAAATACCTGGCCAACGACCTAG ATGTCGTAGAGAGTCGGGCCCTACATGCATGCCTGCCATTGACGTTCGAA AACGACGCCGACGGGGCGAAAACGGCGTGGCGAGCCGGCTTTCGCAAGCG ACTGAAAGAGTTGTTGGACAAGGAAACAGCAGGACAGCTAAAGCCGGCCG AACTTAGGCGCCCCGTGTACAAGGACATAGAAAAAGGGCCGTTCGACCCC GACGCAGCCGCCGAAGAGCAAGAAACCATGCGCAGCAGCGCGTTTGATGT GTCGGAGAAGCCGGTTGTGGGTGGAAAGCTTAAGGCGTCCGCGATAGCCG TCATAGGCGATGGACTAGGGGCGAAACTAAAGACTGGGCCACCCCCGCTA GACATGATCGGCGACACGAAGGACAGCTCTGCAGGCGTTGATGGGATGAC CAGGTCAGCTCCAAACTCGCCAGCATCAAAGTATCGACGACAAAGCTATG CACTCTTGAGAGGTCAGCCGACCACTTGCTCGATGAAGAGCATGATGAGT GAGCTGGGAAACCGCATCTCTCACAGAAGACAAAGCAAACGGCGGAGGTC GTCATTCAATGGGGTTCACGACGTATCTCAGCTGCTTCGAGGCGCTTTCG ATGACCGCATTGCGGAGAACGGAGGGCTACAGCCGAGTGTGGATGAAGCA AGCTCGCAGGGATCGGATTATGATGCGGCGATCGAGCCACCAATTGATCC TGCGCCGCTGCCGTCGACTCAGCCCTCCCAAGCCGCGAGGACGGCGCCAC CGTCCGATCCAAAGTCGAGTGTCGACACAAAGAAGACGAGTCCGAACTCT GGTGCGAGGACCGCCCCTCCGAGCATGAAGGACATGATGGCCGAGCTCGC AGCTAAGGCGAAGGCCCGCGAGGATCGGTCTGCTTCACCGTTGGTGGACG GCAATGCTGGGGCAGGTAACAACGTTGGGGTGGATTCTCCGATTGTTCCG CAATCGATACCGCAGCCACCCGCCACTCCTCCACCCAATCCAAAGTCGAG GGTTGACATCAAGAAGACGAGTCCGAACTCTGGTGCGAAGACCGCCCCTC CGAGCATGAAGGACATGATGACCGAGCTCGCAGCCGAGGCGAAGGCCCGC GAGGAACGGCCTGCTTCACCGTTGGAGGACGGAAACTCTGGGGCAGGTAA CAACGTTGGGGCGGATTCTCCGATTGTTCCGCAAACGATACCGCAGCCAC CCGCCACTCCTCCACCCGATCCAAAGTCGAGTGTCGACACCAAGAAGACG AGCCCGAACTCTGGTGCGAAGACCGCCCCTCCGAGCATGAAGGACATGAT GGCCGAGCTCGCAGCTAAGGCGAAGGCCCGCGAGGATCGGTCTGCTTCAC CGTTGGAGGACGGCAATGCCGGGGCAGGTAACAACGTTGGAGCGGATTCT CCGATTGTTCCGCAATCTATACCGCAGCCACCTGCCACTCCTCCACCCGA TCCAAAGTCGAGTGTCGACACTAAGAAGACGAGTCCGAACTCTGATGCGA AGACCGCCCCTCCGAGCATGAAGGACATGATGGCCGAGCTCGCAGCTAAG GCGAAGGCCCGCGAGGAACGGTCTGCGTAA back to topprotein sequence of EsuBft1051_4a-0001 >EsuBft1051_4 ID=EsuBft1051_4|Name=EsuBft1051_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=709bp
MHVESASGQVSSSNAPVPADGEWAEQIRVKDELISTLRRQLTALGEQPVE EVVTLEEAKKRLREAIDALMTGDTSAEMELALEKWDKYVTNHPDHIKEQA AEEQAWEAANEQKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRI FDRKVLWLIRAPIGMVSKTHVVELKSKYLANDLDVVESRALHACLPLTFE NDADGAKTAWRAGFRKRLKELLDKETAGQLKPAELRRPVYKDIEKGPFDP DAAAEEQETMRSSAFDVSEKPVVGGKLKASAIAVIGDGLGAKLKTGPPPL DMIGDTKDSSAGVDGMTRSAPNSPASKYRRQSYALLRGQPTTCSMKSMMS ELGNRISHRRQSKRRRSSFNGVHDVSQLLRGAFDDRIAENGGLQPSVDEA SSQGSDYDAAIEPPIDPAPLPSTQPSQAARTAPPSDPKSSVDTKKTSPNS GARTAPPSMKDMMAELAAKAKAREDRSASPLVDGNAGAGNNVGVDSPIVP QSIPQPPATPPPNPKSRVDIKKTSPNSGAKTAPPSMKDMMTELAAEAKAR EERPASPLEDGNSGAGNNVGADSPIVPQTIPQPPATPPPDPKSSVDTKKT SPNSGAKTAPPSMKDMMAELAAKAKAREDRSASPLEDGNAGAGNNVGADS PIVPQSIPQPPATPPPDPKSSVDTKKTSPNSDAKTAPPSMKDMMAELAAK AKAREERSA back to topmRNA from alignment at Scaffold_614:24515..28731- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1051_4a-0001 ID=EsuBft1051_4a-0001|Name=EsuBft1051_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4217bp|location=Sequence derived from alignment at Scaffold_614:24515..28731- (Ectocarpus subulatus male Bft15b) ATGCATGTAGAGAGTGCCTCGGGTCAGGTCTCATCGAGTAACGCCCCCGT
GCCCGCCGATGGAGAGTGGGCAGAACAAATCAGAGTCAAGGACGAGCTGA
TCTCTACGTTGAGACGGCAGCTGACGGCGCTGGGGGAGCAACCGGTTGAA
GAGGTTGTAACCCTAGAGGTAAGACTGAAGAAAGATCAGGAGCCTTACCT
GTTGCTTCCACAAGTGTAGCGATGCGTTCGAACTTCCCATATCGTTCTTT
GGTCTAGATGTTTTGTGTGCGTGGAGGCCGTGTGGTCTGCTCAGCCACGA
TTACCCCATGTGGCGAATACACGCGCGTTTGCCGCCCCTCCCTTGGAATA
ACTTACCAACCTAGGTTTGTTCGCGGGCATGGGTTTCCCTCCAATCCTCG
CGTACAGTTAGCGTCCACAATTAAGAATATTGTTTTGAAGAAATAGAGCC
TCACTTTTCCACGAAACATAGGAAAATAGGGTTAAGACACATGGCTCAGT
CTGTGTCACACAAAAAGAAATGTCTCTAAAAAGAAACAGCGGCGACCGCT
GCCCTACCACAAAAGAAACGAGGGGTTACGGGGGAGTGTGTCGAATAAGA
AACACCCCACGCTCCTCCTATCTCTCGCATTCCCCCCTGTCCCACTACCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGT
GCATTATTAGTTGTACGAGGAGGGGGAGTGAGAGTTATTATTTCGCGGCG
CCCCCTCCGGGCCCCTGCCGTCTCTGGCGGGCTCTTGCCCTCCGGTTCTG
GCATAGCACACTACACAGGCTGCGAACCAAGATGCGCCGTCTGCTGTACG
GTTTTGATGATGCTCTGCGCCAGCTCTCGTGAGCAGAGAAAATAAGAAAT
TGCCCATAAAAGAAATTCAGGAGGAATTGGCGGCACGAAAAAATAAAAAA
CTTGACACAATAACTTGAACGACATACGCTGACTTTATACCCCACAAAAA
AATTCGAGGCTAGACCTGAAATACGCGTTTCTTAATTGCGGGCGTTAACT
GTATCAAAGGCACGCTTTCAGCAAAAACATACATGGTCTCTTTTCGTCGA
ATTTAACCACGGGTTGCTACCAGATTTGACCCACAACTGCCACACCGCAC
CTGGTCGTTTCGCCCTGTCTACCCACCGTTCCCTCCATCAAAGGAGGCGA
AGAAGCGTTTACGAGAGGCTATTGACGCCCTGATGACGGGGGACACGTCT
GCCGAAATGGAGCTCGCCCTGGAAAAATGGGACAAATATGTCACCAACCA
CCCCGATCACATCAAAGAGCAGGCCGCCGAAGAGCAGGCATGGGAAGCAG
CAAATGAGCAAAAAAACAACGAGGCGCTCCATCTTATGAAGACTTTCGTT
CCGCCCGACATCTTTCACGCTGGCCTTGACGGTCTACGGGGAGGGGGGCT
GACGCCGGCGCTCGCAAAGAGGATATTCGATCGCAAGGTAAAAAGGGTAT
AGCGCATGCGTAGATACGGAGAAGGGGATATGCATGCAACATCATGACGC
GCCTAGACGAAACAAATAGTGCAAGTGCATGCATCATGAAACTCCGTAGC
CTATCGCCAAAGAAGCTTTGAAAGGCGCCCGCGTGGCCTCCTTTTCTTAG
AGCATCCTTCATAGAGGTGTTTAGTACGTTCTTCTATCTTGTCGAGTAAC
CAAGTATCCGTGGCACCATTTTCGTCTTTCGATAACGCTCGGCGACACAC
CAATTCACCCAGTCCTTAAGGCTCTCTTCGCTCAGCTGCCCGCCCCCCCT
CGCCAACTGTTCAGGTTCTCTGGCTCATTCGCGCGCCAATCGGAATGGTG
TCAAAAACTCACGTGGTGGAGTTGAAGAGTAAATACCTGGCCAACGACCT
AGATGTCGTAGAGAGTCGGGCCCTACATGCATGCCTGCCATTGACGTTCG
AAAACGACGCCGACGGGGCGAAAACGGCGTGGCGAGCCGGCTTTCGCAAG
CGACTGAAAGAGTTGTTGGACAAGGAAACAGCAGGACAGCTAAAGCCGGC
CGAACTTAGGCGCCCCGTGTACAAGGTGAGTACCTATTGGAGTCAAGGCG
AAATTTTTACGTCACTTGTAGGAACTACGGCAACGCCAGACGAGTTGGCG
ACTCCATCAATTACACCACTGGGCGGAGTACATAAGTGCCTTCGCGCGGA
TCGGTGTACAATGATGCTTTGTTTTAAAACAATTTGGATGAGCCTCACCA
TCCATTCCCAAGCAGGAGTCTTCGATCGAATACTCGAAACCCGTGCACAA
CATGCCTCAGATCCTTCACGGGGGAGGGACAACAATGCCGAAGCACTCGC
TCGTAAGCTTTTGTGCGTAGCTCCTGGATTTGTGTGTGTACTGTACTTTC
GGTGTTTTCCAGCTCGCCGGACCACCACATCCCAGATACTACTGAAGTCC
GAGCCGTTTCTCTGTCGTCCGACGAAAAGCCTCTCGTCTCCGTGTTCGAA
CGAAAATGGGCAGGACATAGAAAAAGGGCCGTTCGACCCCGACGCAGCCG
CCGAAGAGCAAGAAACCATGCGCAGCAGCGCGTTTGATGTGTCGGAGAAG
CCGGTTGTGGGTGGAAAGCTTAAGGCGTCCGCGATAGCCGTCATAGGCGA
TGGACTAGGGGCGAAACTAAAGACTGGGCCACCCCCGCTAGACATGATCG
GCGACACGAAGGACAGCTCTGCAGGCGTTGATGGGATGACCAGGTCAATT
AGAGAGGGGAGACCCGCTTAGCACATGGATATGAGCCTGTAATTTCGTTG
CTCAATGCTTGGTCATGCGTGGCAGAAAAACCCTTGACATGCACACCTTC
TCCGCGGTATTAGCGATGTTGATGTTTGTCAGTGACTGAAAAAGCGGGTA
TTTACATACCAACACCTGGTTACCTTTTGCATCATCACAGGTCAGCTCCA
AACTCGCCAGCATCAAAGTATCGACGACAAAGCTATGCACTCTTGAGAGG
TCAGCCGACCACTTGCTCGATGAAGAGCATGATGAGTGAGCTGGGAAACC
GCATCTCTCACAGAAGACAAAGCAAACGGCGGAGGTCGTCATTCAATGGG
GTTCACGACGTATCTCAGCTGCTTCGAGGCGCTTTCGATGACCGCATTGC
GGAGAACGGAGGGCTACAGCCGAGTGTGGATGAAGCAAGCTCGCAGGGAT
CGGATTATGATGCGGCGATCGAGCCACCAATTGATCCTGCGCCGCTGCCG
TCGACTCAGCCCTCCCAAGCCGCGAGGACGGCGCCACCGTCCGATCCAAA
GTCGAGTGTCGACACAAAGAAGACGAGTCCGAACTCTGGTGCGAGGACCG
CCCCTCCGAGCATGAAGGACATGATGGCCGAGCTCGCAGCTAAGGCGAAG
GCCCGCGAGGATCGGTCTGCTTCACCGTTGGTGGACGGCAATGCTGGGGC
AGGTAACAACGTTGGGGTGGATTCTCCGATTGTTCCGCAATCGATACCGC
AGCCACCCGCCACTCCTCCACCCAATCCAAAGTCGAGGGTTGACATCAAG
AAGACGAGTCCGAACTCTGGTGCGAAGACCGCCCCTCCGAGCATGAAGGA
CATGATGACCGAGCTCGCAGCCGAGGCGAAGGCCCGCGAGGAACGGCCTG
CTTCACCGTTGGAGGACGGAAACTCTGGGGCAGGTAACAACGTTGGGGCG
GATTCTCCGATTGTTCCGCAAACGATACCGCAGCCACCCGCCACTCCTCC
ACCCGATCCAAAGTCGAGTGTCGACACCAAGAAGACGAGCCCGAACTCTG
GTGCGAAGACCGCCCCTCCGAGCATGAAGGACATGATGGCCGAGCTCGCA
GCTAAGGCGAAGGCCCGCGAGGATCGGTCTGCTTCACCGTTGGAGGACGG
CAATGCCGGGGCAGGTAACAACGTTGGAGCGGATTCTCCGATTGTTCCGC
AATCTATACCGCAGCCACCTGCCACTCCTCCACCCGATCCAAAGTCGAGT
GTCGACACTAAGAAGACGAGTCCGAACTCTGATGCGAAGACCGCCCCTCC
GAGCATGAAGGACATGATGGCCGAGCTCGCAGCTAAGGCGAAGGCCCGCG
AGGAACGGTCTGCGTAA back to topCoding sequence (CDS) from alignment at Scaffold_614:24515..28731- >EsuBft1051_4a-0001 ID=EsuBft1051_4a-0001|Name=EsuBft1051_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2130bp|location=Sequence derived from alignment at Scaffold_614:24515..28731- (Ectocarpus subulatus male Bft15b) ATGCATGTAGAGAGTGCCTCGGGTCAGGTCTCATCGAGTAACGCCCCCGT GCCCGCCGATGGAGAGTGGGCAGAACAAATCAGAGTCAAGGACGAGCTGA TCTCTACGTTGAGACGGCAGCTGACGGCGCTGGGGGAGCAACCGGTTGAA GAGGTTGTAACCCTAGAGGAGGCGAAGAAGCGTTTACGAGAGGCTATTGA CGCCCTGATGACGGGGGACACGTCTGCCGAAATGGAGCTCGCCCTGGAAA AATGGGACAAATATGTCACCAACCACCCCGATCACATCAAAGAGCAGGCC GCCGAAGAGCAGGCATGGGAAGCAGCAAATGAGCAAAAAAACAACGAGGC GCTCCATCTTATGAAGACTTTCGTTCCGCCCGACATCTTTCACGCTGGCC TTGACGGTCTACGGGGAGGGGGGCTGACGCCGGCGCTCGCAAAGAGGATA TTCGATCGCAAGGTTCTCTGGCTCATTCGCGCGCCAATCGGAATGGTGTC AAAAACTCACGTGGTGGAGTTGAAGAGTAAATACCTGGCCAACGACCTAG ATGTCGTAGAGAGTCGGGCCCTACATGCATGCCTGCCATTGACGTTCGAA AACGACGCCGACGGGGCGAAAACGGCGTGGCGAGCCGGCTTTCGCAAGCG ACTGAAAGAGTTGTTGGACAAGGAAACAGCAGGACAGCTAAAGCCGGCCG AACTTAGGCGCCCCGTGTACAAGGACATAGAAAAAGGGCCGTTCGACCCC GACGCAGCCGCCGAAGAGCAAGAAACCATGCGCAGCAGCGCGTTTGATGT GTCGGAGAAGCCGGTTGTGGGTGGAAAGCTTAAGGCGTCCGCGATAGCCG TCATAGGCGATGGACTAGGGGCGAAACTAAAGACTGGGCCACCCCCGCTA GACATGATCGGCGACACGAAGGACAGCTCTGCAGGCGTTGATGGGATGAC CAGGTCAGCTCCAAACTCGCCAGCATCAAAGTATCGACGACAAAGCTATG CACTCTTGAGAGGTCAGCCGACCACTTGCTCGATGAAGAGCATGATGAGT GAGCTGGGAAACCGCATCTCTCACAGAAGACAAAGCAAACGGCGGAGGTC GTCATTCAATGGGGTTCACGACGTATCTCAGCTGCTTCGAGGCGCTTTCG ATGACCGCATTGCGGAGAACGGAGGGCTACAGCCGAGTGTGGATGAAGCA AGCTCGCAGGGATCGGATTATGATGCGGCGATCGAGCCACCAATTGATCC TGCGCCGCTGCCGTCGACTCAGCCCTCCCAAGCCGCGAGGACGGCGCCAC CGTCCGATCCAAAGTCGAGTGTCGACACAAAGAAGACGAGTCCGAACTCT GGTGCGAGGACCGCCCCTCCGAGCATGAAGGACATGATGGCCGAGCTCGC AGCTAAGGCGAAGGCCCGCGAGGATCGGTCTGCTTCACCGTTGGTGGACG GCAATGCTGGGGCAGGTAACAACGTTGGGGTGGATTCTCCGATTGTTCCG CAATCGATACCGCAGCCACCCGCCACTCCTCCACCCAATCCAAAGTCGAG GGTTGACATCAAGAAGACGAGTCCGAACTCTGGTGCGAAGACCGCCCCTC CGAGCATGAAGGACATGATGACCGAGCTCGCAGCCGAGGCGAAGGCCCGC GAGGAACGGCCTGCTTCACCGTTGGAGGACGGAAACTCTGGGGCAGGTAA CAACGTTGGGGCGGATTCTCCGATTGTTCCGCAAACGATACCGCAGCCAC CCGCCACTCCTCCACCCGATCCAAAGTCGAGTGTCGACACCAAGAAGACG AGCCCGAACTCTGGTGCGAAGACCGCCCCTCCGAGCATGAAGGACATGAT GGCCGAGCTCGCAGCTAAGGCGAAGGCCCGCGAGGATCGGTCTGCTTCAC CGTTGGAGGACGGCAATGCCGGGGCAGGTAACAACGTTGGAGCGGATTCT CCGATTGTTCCGCAATCTATACCGCAGCCACCTGCCACTCCTCCACCCGA TCCAAAGTCGAGTGTCGACACTAAGAAGACGAGTCCGAACTCTGATGCGA AGACCGCCCCTCCGAGCATGAAGGACATGATGGCCGAGCTCGCAGCTAAG GCGAAGGCCCGCGAGGAACGGTCTGCGTAA back to top
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