EsuBft1047_10a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1047_10a-0001
Unique NameEsuBft1047_10a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_512contigScaffold_512:531396..535150 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LGK5
ProteomeIdEsuBft1047_10
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsPTHR10566
Protein domainsTRANSMEMBRANE
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsSIGNAL_PEPTIDE
Protein domainsCYTOPLASMIC_DOMAIN
Ownerapollo_admin@sb-roscoff.fr
Noteuncharacterized aarf domain-containing protein kinase 2 os:homo sapiens gn:adck2 pe:2 sv:1 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length933
Hectar predicted targeting categorymitochondrion
Evalue2.25e-153
EggNOG OGsCOG0661@1|root,KOG1236@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_001690.1
Date last modified2016-06-14
Date creation2016-06-14
KEGG koko:K08869
Descriptionkinase activity
COG categoryU
BRITEko00000,ko01001
Cross References
External references for this mRNA
DatabaseAccession
EC2.7.11
GO0004702
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1047_10aEsuBft1047_10aEctocarpus subulatus male Bft15bgeneScaffold_512 531396..535150 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1047_10a-0001EsuBft1047_10Ectocarpus subulatus male Bft15bpolypeptideScaffold_512 531396..535150 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1047_10a-0001-exonEsuBft1047_10a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_512 531396..531946 +
EsuBft1047_10a-0001-exonagat-exon-58465Ectocarpus subulatus male Bft15bexonScaffold_512 533301..533318 +
EsuBft1047_10a-0001-exonagat-exon-58464Ectocarpus subulatus male Bft15bexonScaffold_512 533424..533499 +
EsuBft1047_10a-0001-exonagat-exon-58467Ectocarpus subulatus male Bft15bexonScaffold_512 534180..534314 +
EsuBft1047_10a-0001-exonagat-exon-58466Ectocarpus subulatus male Bft15bexonScaffold_512 534998..535150 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1047_10a-0001-cdsEsuBft1047_10a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_512 531396..531946 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1047_10a-0001 ID=EsuBft1047_10a-0001|Name=EsuBft1047_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=933bp|location=Sequence derived from alignment at Scaffold_512:531396..535150+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGTCGCTCCCTGCAGAGATGGCGAGCATGACAACGAGGAGATACCA
CAGCGCAATTTCCGCCAGAAAGACTCCTGCCTTGACCAGAGCCTTGACCA
TCACAGCGGTCGCAACAGGCGGAGCGGGAGGAACGATGTTGACGCTGAGT
GCCAACCTTACTCCTCCGTGCGCTGCAGCTACGACACCTGCCAACTTGCC
GGAGCGTCGCGACAGCCAGAGGCATGGGGATAGCAGCTCGTCCGCCATGA
TGTGGGATTACTTGCGGTCGAGGCTGACGAAAACGCTGAGGGGGCTCCTC
TGGTCCTCCCTGGAGATGTTGCTTCTCTGGTCTCCTGTCGTTGTTTCTGG
AGCTGTGGTGGGCATGCTATGCCAGCTGCCGCTTGTTCCCGAGGAGACTT
CATCGCGCTTTTCAATGCTGTGGTGGACCTTCCTGTTGAAAGCCCTTGCC
AGGAGCGGACCCACATTTGTTTCCAGGGTGAGCTTTTTCTTTATGAAACC
CAGAGTAGAAAATGCTGAAATGTTCCGCCCGAGCAGGATGTACCTCCGGA
GGACCGGCTTCCGACACAGGGAGACAGTACGCGTTCTCTTCTCAGCCGTC
ATGGTGGGCGACGGGGAGCTGGCTGGTTCGGTGGTCATCGAGCGGGCAAG
CGAACACCGGTGCACCGACCCAGAGGCCTTTTGCAAAGGCGTGAACGAAG
CGATTCAGAGGGCTAGGCTTGGGGAGGCCCAGGCGGAGGAGATGTTGGCG
CGCATCTTCAGGTTGTGCTTGAAGTACGAGGTGAGACTGGAGCCCAGGGT
GGCACTCGAGGTGATCGCCGTGGCCGCTCTGGAAGGGCTCCGGCGAACCC
TTGCCCCCGACTGCAACCTGCCGACGGCTTCGTTACCGTCGGTTTTGACG
GCCGTTCCAATGAAGACGGCGGGCGCGGGGTAA
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protein sequence of EsuBft1047_10a-0001

>EsuBft1047_10 ID=EsuBft1047_10|Name=EsuBft1047_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=310bp
MRSLPAEMASMTTRRYHSAISARKTPALTRALTITAVATGGAGGTMLTLS
ANLTPPCAAATTPANLPERRDSQRHGDSSSSAMMWDYLRSRLTKTLRGLL
WSSLEMLLLWSPVVVSGAVVGMLCQLPLVPEETSSRFSMLWWTFLLKALA
RSGPTFVSRVSFFFMKPRVENAEMFRPSRMYLRRTGFRHRETVRVLFSAV
MVGDGELAGSVVIERASEHRCTDPEAFCKGVNEAIQRARLGEAQAEEMLA
RIFRLCLKYEVRLEPRVALEVIAVAALEGLRRTLAPDCNLPTASLPSVLT
AVPMKTAGAG
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mRNA from alignment at Scaffold_512:531396..535150+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1047_10a-0001 ID=EsuBft1047_10a-0001|Name=EsuBft1047_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3755bp|location=Sequence derived from alignment at Scaffold_512:531396..535150+ (Ectocarpus subulatus male Bft15b)
ATGCGGTCGCTCCCTGCAGAGATGGCGAGCATGACAACGAGGAGATACCA
CAGCGCAATTTCCGCCAGAAAGACTCCTGCCTTGACCAGAGCCTTGACCA
TCACAGCGGTCGCAACAGGCGGAGCGGGAGGAACGATGTTGACGCTGAGT
GCCAACCTTACTCCTCCGTGCGCTGCAGCTACGACACCTGCCAACTTGCC
GGAGCGTCGCGACAGCCAGAGGCATGGGGATAGCAGCTCGTCCGCCATGA
TGTGGGATTACTTGCGGTCGAGGCTGACGAAAACGCTGAGGGGGCTCCTC
TGGTCCTCCCTGGAGATGTTGCTTCTCTGGTCTCCTGTCGTTGTTTCTGG
AGCTGTGGTGGGCATGCTATGCCAGCTGCCGCTTGTTCCCGAGGAGACTT
CATCGCGCTTTTCAATGCTGTGGTGGACCTTCCTGTTGAAAGCCCTTGCC
AGGAGCGGACCCACATTTGTTTCCAGGGTGAGCTTTTTCTTTATGAAACC
CAGAGTAGAAAATGCTGAAATGTTCCGCCCGAGCAGGATGTACCTCCGGA
GGTTACCTGCAATTCTACACCCACAGTCGATTTAAGAGTTCGATTCCTCT
GCAGCAAAAGTAGTGACGGTGCCGAGAATTGCAACCTTAAAAAGGTTTCC
TAGATACTTTTGCACACACCTATTGTTTGATTCGTGGAAACCTCTTCGTC
GTGGAGTATTCGAGCTTCGAAAATCGGTCCAGGGGTATGGTATCTTACGC
AACCCGCTGCCGTTATCACCGCGTACTTGGTGCGTAGCAACCAGTCCACG
GTTCCCCTCGCCGCGGTGCCGCTATCGTTACCGCCACTCTCGCCTATAGC
CCCCACCCCCCGCTGCTGCCGCAGCCGTACCCCTCTCCCTGCCCTATGGC
CTCATCGTTTTTCGTCGACCACCATGTAACTGACAATTATGCAAAGAGCG
TTAGCGCATTTACAACCAGCATTTCCAGAAGTTGAATATTTTTGAGAAAC
GCGCAGCCGAGGTCTGTTTGCCTTGGTCCCATGTTTTTTTGCCTGTGGTG
TGGCCTCATTGGCCAAGGCCTAGCGTGCGCACAGTTCGGGTGCATTGTTC
ACCCCCCGCCCCCCGCCCCCCCTCCGGTGTTTGCCATCGGGGTTGGGTTT
TCATCGCTTGGCAACGACGTTGTAAAACAAGCCGCCGCCCCCCCCGGTGT
TTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACA
AGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTGAGAGCCTGGTCCGG
TGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATG
GTCTAACGACTACGGTATGCACGACTATGAGTATGAGTACACCCCCGCCC
CTCCCACGTTAACCCTCCGCCATCACTGTGCTCCCCGCCTCTCCTGACGT
TTCATGAACGACCATGGCCGGGAAAAAGACTGCCCAATGGGTCAAAGACC
GACAGGACCGGCTTCCGACACAGGTTTGCAGCAGTGTACGGAAGCTAAAC
GCGCGCACCAGGGCCTCCTGCTTGACGGGCGGGGGGGTCTTGGCGTGGTC
TCGCATGCGGTCTCGGCGACGCAGACAGGGAGACAGTACGCGTTCTCTTC
TCAGCCGTCATGGTGGGCGACGGGGAGCTGGCTGGTTCGGTGGTCATCGA
GCGGGTGAGATCAAAGAGTGCTTAGCACAGCTGGTGGCACCACTTAATAA
AGAATTCAGGTTATAGCCTTAAATTTAGTCAGAATAAGCCCAGTTCCGGT
AGGCGCGGGATTTCCATCTCTTTTTGGGCGTGTGGTCGAGGTAGAGAACT
CCCGGGTGCCCGTTTGGGCGATTGCGTTGGGCAGTTTGGAGTCTAAAGAT
CTTCATATCTATGTGGTGGTACCCTGATCCGTGAGGGGCCACAGAGATCT
CCCACCCCCTCTTCGGGACGGAGGCTCCGTATCACGGGATCCCCTGCCTC
TAGAGTGTGCTCGGGGGCTACCACGGCTAGGCCAATCGCTTTCGTTAGTC
TCCATCGGTGAAGGTTCAGGAGAAGTTCCAAAATTATTTTTCCAGGTGCA
TGCAACGGCGAGCGGATGACGGTACATGTAGTACCAAACGCGGACGTACG
TATAGTTTGAGGGTGTGCGTGTAAAAGAGGGCGTGGAGAAAAAAACCAAG
CGAGAAAAGCATGAAAGGGTCATGGTTACTCTTACACCGCCGCATGTGCT
TGCGGGCCGTGCCGCCTCCATGAAGTACTTCAAACAACTCGCTTGTCTCA
GGGGAAACGGTTTGCTCACGCTACACCCTTCATACATGTCCCCGCGCGTT
TCGCGTTTCGCTTGTCGCTCTTTATTATTCGCAGGCAAGCGAACACCGGT
GCACCGACCCAGAGGCCTTTTGCAAAGGCGTGAACGAAGCGATTCAGAGG
GCTAGGCTTGGGGAGGCCCAGGCGGAGGAGATGTTGGCGCGCATCTTCAG
GTTGTGCTTGAAGTACGAGGTGGGTGGGTGTTTCCATCTCCGGGATCTCG
CCTTTTTTTCTTCCTTTCCCGTGTTTTCCAACACTCGATGCAGGGTACAT
TTCCGAACACAGGGTACAGTTGTTGAGAAAAGCAGCCACGGCAGGGCATA
CCCTGCGCTTTTTCTGACGCACCGAGGTGAAGGTGGGCGCTAACCAATCA
TACGAGTGAATTTACTGCTGTCAATGACTGTTAACCTACGTGAGTCGCTT
TTCGACCAGGGTATATATACCATATTGTGTCGTTTTCCCTGAAAAAGACC
TTTGAAAGACACGTGTTAAGCCGGTGAATCACGAAACATGGTAATTTGCC
TAGTCGTTTTGTCTGATACTGAACAACGGTTCCTTGAGATCCGGCATTTG
GTCTTCACCCACCCGCATCGCGATCGGCAATCTTGAAACAAATACAGCGT
GTTTCTTTTCCTGTGTTTTTCCAACACCCAGTGCGCCTTTAAAAATGACC
TTCGAAAGGCGCAAAGAATTTCAGCTGGTGAATCACGAGACGTGGTGTTG
GTTGTTTCCTTGTCTTCCTGTTGTAGAGCTGATTGCTGTAGCTGCTGTTG
GTTTCGTCGAGATCCGCCATTCGGTCTTCGCAAACCCGCTGGCGATCTTC
GCGAAAACAAAACCTTGTGAGACGCGGCGGAATATGCAGATCAATAACAC
AGGTGAGACTGGAGCCCAGGGTGGCACTCGAGGTGATCGCCGTGGCCGCT
CTGGAAGGGCTCCGGCGAACCCTTGCCCCCGACTGCAACCTGCCGACGGC
TTCGTTACCGTCGGTTTTGACGGCCGTTCCAATGAAGACGGCGGGCGCGG
GGTAA
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Coding sequence (CDS) from alignment at Scaffold_512:531396..535150+

>EsuBft1047_10a-0001 ID=EsuBft1047_10a-0001|Name=EsuBft1047_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=933bp|location=Sequence derived from alignment at Scaffold_512:531396..535150+ (Ectocarpus subulatus male Bft15b)
ATGCGGTCGCTCCCTGCAGAGATGGCGAGCATGACAACGAGGAGATACCA
CAGCGCAATTTCCGCCAGAAAGACTCCTGCCTTGACCAGAGCCTTGACCA
TCACAGCGGTCGCAACAGGCGGAGCGGGAGGAACGATGTTGACGCTGAGT
GCCAACCTTACTCCTCCGTGCGCTGCAGCTACGACACCTGCCAACTTGCC
GGAGCGTCGCGACAGCCAGAGGCATGGGGATAGCAGCTCGTCCGCCATGA
TGTGGGATTACTTGCGGTCGAGGCTGACGAAAACGCTGAGGGGGCTCCTC
TGGTCCTCCCTGGAGATGTTGCTTCTCTGGTCTCCTGTCGTTGTTTCTGG
AGCTGTGGTGGGCATGCTATGCCAGCTGCCGCTTGTTCCCGAGGAGACTT
CATCGCGCTTTTCAATGCTGTGGTGGACCTTCCTGTTGAAAGCCCTTGCC
AGGAGCGGACCCACATTTGTTTCCAGGGTGAGCTTTTTCTTTATGAAACC
CAGAGTAGAAAATGCTGAAATGTTCCGCCCGAGCAGGATGTACCTCCGGA
GGACCGGCTTCCGACACAGGGAGACAGTACGCGTTCTCTTCTCAGCCGTC
ATGGTGGGCGACGGGGAGCTGGCTGGTTCGGTGGTCATCGAGCGGGCAAG
CGAACACCGGTGCACCGACCCAGAGGCCTTTTGCAAAGGCGTGAACGAAG
CGATTCAGAGGGCTAGGCTTGGGGAGGCCCAGGCGGAGGAGATGTTGGCG
CGCATCTTCAGGTTGTGCTTGAAGTACGAGGTGAGACTGGAGCCCAGGGT
GGCACTCGAGGTGATCGCCGTGGCCGCTCTGGAAGGGCTCCGGCGAACCC
TTGCCCCCGACTGCAACCTGCCGACGGCTTCGTTACCGTCGGTTTTGACG
GCCGTTCCAATGAAGACGGCGGGCGCGGGGTAA
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