EsuBft1043_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1043_5a-0001
Unique NameEsuBft1043_5a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_11contigScaffold_11:534064..539810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LC51
ProteomeIdEsuBft1043_5
Protein domainsPTHR30314
Protein domainsIPR003008
Protein domainsIPR024757
Protein domainsIPR008280
Protein domainsIPR000158
Protein domainsIPR018316
Ownerapollo_admin@sb-roscoff.fr
Notecell division protein os:synechocystis (strain pcc 6803 kazusa) gn:ftsz pe:1 sv:1 [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length1344
Hectar predicted targeting categoryother localisation
Evalue2.37e-58
EggNOG OGsCOG0206@1|root,2QRFN@2759|Eukaryota
Ec32 ortholog descriptionCell division protein FtsZ
Ec32 orthologEc-20_004480.1
Date last modified2016-06-13
Date creation2016-06-13
KEGG koko:K03531
KEGG Pathwayko04112,map04112
Descriptionchloroplast fission
COG categoryD
BRITEko00000,ko00001,ko02048,ko03036,ko04812
Cross References
External references for this mRNA
DatabaseAccession
GO0030428
GO0000272
GO0005198
GO0051258
GO0000023
GO0005525
GO0042802
GO0009534
GO0019252
GO0009664
GO0003924
GO0006098
GO0010020
GO0010075
GO0019344
GO0043234
GO0006184
GO0042651
GO0009570
GO0000917
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1043_5aEsuBft1043_5aEctocarpus subulatus male Bft15bgeneScaffold_11 534064..539810 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1043_5a-0001EsuBft1043_5Ectocarpus subulatus male Bft15bpolypeptideScaffold_11 534856..539810 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1043_5a-0001-exonagat-exon-42537Ectocarpus subulatus male Bft15bexonScaffold_11 534064..534924 -
EsuBft1043_5a-0001-exonEsuBft1043_5a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_11 535730..535845 -
EsuBft1043_5a-0001-exonagat-exon-42539Ectocarpus subulatus male Bft15bexonScaffold_11 536944..536956 -
EsuBft1043_5a-0001-exonagat-exon-42538Ectocarpus subulatus male Bft15bexonScaffold_11 537874..537921 -
EsuBft1043_5a-0001-exonagat-exon-42535Ectocarpus subulatus male Bft15bexonScaffold_11 538671..538737 -
EsuBft1043_5a-0001-exonagat-exon-42534Ectocarpus subulatus male Bft15bexonScaffold_11 539160..539222 -
EsuBft1043_5a-0001-exonagat-exon-42536Ectocarpus subulatus male Bft15bexonScaffold_11 539635..539810 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1043_5a-0001-exonagat-three_prime_utr-423Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_11 534064..534855 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1043_5a-0001-cdsEsuBft1043_5a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_11 534856..534924 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1043_5a-0001 ID=EsuBft1043_5a-0001|Name=EsuBft1043_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1344bp|location=Sequence derived from alignment at Scaffold_11:534064..539810- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGCTAATTCGAGATCGCATATCACTGGCCAACTCCTTGCAGATCGT
ACCTGAGGACACCCCCGTGCAAGATGCGTTTCTCGTAGCGGACGACATTC
TCAGGCAGGGCGTGGTGGGAATTTCGGAGATCATCATCAAGCCCGGATTG
GTCAACGTTGATTTCGCCGATGTCAGGTCTGTGATGAACAAGGCCGGGAC
TGCCTTGATGGGACTCGGAAAGGCCAAGGGAAAGAACAGGGCTGCCGAGG
CTGCAAGAGCAGCGATCGAATCCCCGCTGCTCGACTTCCCAGTGACCGAC
GCAAAGGGAATCGTGTTTAACATCATTGGAGACGCGGGTCTCACCCTGGC
AGAGGTGGTGCTGCCAGCGAGCTACGTCAAGGAGCAGCTGGTGTACAGCC
AGATCAAGCCGGAAGACACGCCACCGCCGTTGCCGTCTCTCGGCACCGCC
CAGGGAAGCAGAGACCCGTTCCAGAGAGATCAGCGACCGGCGAAGAAGAA
GCGGGGTATCCTGGGATTCCTTCGGCGTATTCTGTTCGGAAAAAAGCAAT
AAGAGTTGGCGTCGGGGGGTTGTTGATTATACAATTCACGCATCTGGAAC
AATCGAAGCCCTTTATTAGTTGGTGGGTCTATGTCCCTTTTTAATTTGGT
AAGTCTTTGTCGTCTTGAAGAGTCTGTAGGAGTAGTAGTCGGATGTGGAG
ATCTCGTGTGTTGTACATGCCGTCGTTGGTGGTGGTTGTGGCTGGTGGTC
CACGAGGGGAATGGTTTTCGGATACCTGCGAGTGTTGTCTGTTCCGTTTT
TCGTCAGCTTTGAGTGCTTCTGTCAATCGCCAGAGAAAGTAGAGAGAAAG
GCCACTCCCTGTTTCTTCTCGCCAGCCTGTGTCCCAAACTTGACGTACTT
ACCTCTCCTCCTTTGCTTCAAGCCATTCTTGTGTGACGAAACCTTGCTCA
GGGTTGCTCCCCTCTTCCCAGCATTGTTACAATCCTTGGAGTTGCTTCCT
AAGGGCAAGGACTACCTACCGCAAGCATGCTCTCTGGGACAACTCAAGCG
AAAATGTTTCAGTGAATGAGGTGGTGTATCCTCGACAAGCAGGTCATTGT
TTCTGTCCTTGATACGAGGCGGTACCTATTAGTCAGGGGGGACAAGGTCG
GTGAGAGGTTTGACGAAGGAAGCCCATACACCGTGGGAGGTAGTGGCAAG
GAAAGTTTGGCGTTCTAGGCTGCTACGATACGATGAGTTTTTTTATATGG
GACAGGGCCGCCGCGTGAGGGAGAGGATGGAATTGAGGGTGGCCGGGAGT
TCGAGTTGTTGTTATTGATGTCTTTTGTCTCCTGTCTCTTGTGT
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protein sequence of EsuBft1043_5a-0001

>EsuBft1043_5 ID=EsuBft1043_5|Name=EsuBft1043_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=183bp
MGLIRDRISLANSLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGL
VNVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTD
AKGIVFNIIGDAGLTLAEVVLPASYVKEQLVYSQIKPEDTPPPLPSLGTA
QGSRDPFQRDQRPAKKKRGILGFLRRILFGKKQ
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mRNA from alignment at Scaffold_11:534064..539810-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1043_5a-0001 ID=EsuBft1043_5a-0001|Name=EsuBft1043_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5747bp|location=Sequence derived from alignment at Scaffold_11:534064..539810- (Ectocarpus subulatus male Bft15b)
ATGGGGCTAATTCGAGATCGCATATCACTGGCCAACTCCTTGCAGATCGT
ACCTGAGGACACCCCCGTGCAAGATGCGTTTCTCGTAGCGGACGACATTC
TCAGGCAGGGCGTGGTGGGAATTTCGGAGATCATCATCAAGCCCGGATTG
GTCAACGTTGATTTCGCCGATGTCAGGTATGAAATGACTGGGTAGAGATG
GGGAGATTTTTGACGCTGCACTAGATCGTTTTGGGTACTGGTGTGCTCGG
TCATTGTCGGCGTGGCATGGCACACCGTCCTCTCTGTTGTTGATGCGCTG
CTCGTGGTGACTTGGACCCTGCCGTCTTGTGACTAACACAAACTGCGCCT
ATGTGTATAGTTGTGTGCTGAAAACGTCCGTGATGAAAGCCCTATTTGTT
CGTTTTGTGCATGCTGTATGCGCGCTCACAGGTCTGCAACCACGTTATTT
GTTTGTATGGATCAGCAGGTTCCTGGTGATGGCTGTTGTCTGTCTGTCTG
TTTCTTGTTGCGTGCATGTCCGTATCGTGGATCCCGTGACCATGCCCTGT
CGTGTGGTCCCTCCGCGTGTGCCTTTGCGATGCTACAGGTCTGTGATGAA
CAAGGCCGGGACTGCCTTGATGGGACTCGGAAAGGCCAAGGGAAAGAACA
GGTGAGTGAGTGCTCACTATTCGAGACAATCAGTGCGGCGACTGCCGTGC
ATGTTGTTTCTCTTACAGAGGCGTATATGCTGTGATATGGTTGCACGACA
TATACCGCCATTAAACACAAGGATTTAGTTGACACGGTATGCGAAGAGAC
GTCCTCCTTCTTGTGCTGAAAAAGGCGGGACGTAGTGTCGATAGGATAGC
TAGGATAGAGAAAACATTTTTGTTCCACCTTTCGCAAAGTAGGAAGGAAC
GATTGGACATCGGTGATCGGCCCTGTGGGAACAATGCTCCGTCCTCTCGA
GGACGCGCGTGGTCAATGGTCAACAACTACGGCGTGCAAGACATGAGAGT
ACGCCCACCCCGCCCCCCAATGCCCTCTCCTTCTGGTGCTTTTTTTCATG
TTGCCGTGCGGTCGTGGCCGCAGGGCTGCCGAGGCTGCAAGAGCAGCGAT
CGAATCCCCGCTGCTCGACTTCCCAGTGACCGACGCAAAGGTAAGGTATG
CATAGGTAAAGGGGAGATAGAACAAGAAACATGTTTGTAAGCAACCTACA
CGCTGCTCTCCGTGTAGGTTTGTCTCCCTGCGTGTTCGTGTCCTGCCGCT
GGAGCAATTAGTTTTCTCTACCGCTAAGGACAGAGCCAACGCAGTACACG
AGAAGGATATGACATGGGCGGATCAACGAAAACACTTAGAAAAATGTGCC
CCGGGGCATTCGATCAACTTTTGGCACGTGTTTTGGTTGTTTTTGGCGCC
CAGGGGCGTTCCACTTCTGAGGCAGTCGCCACAATCCTCATGGTACGTTT
CTTGGCGATGTTTGTTATACCATCCTCTGCCAAAGGGGCAGTTTTGTCGC
TCCTATCTACCTACGACAGTGGAATTATCGAACATTCTGCGCGCTAGGCC
TTGTATCGTTGAGACAAAGAGAGCTTCGGTTCATCGAAGGCTAGCGTTGC
TGACGTTTACCTTTGTCAATAATTCACCATTCAATCCCGTCGGCGGCCCT
CCTACCTGTCTGGGTGGAGGGGGGTCCCGCAGACTATATATATATATTTT
TTAAATCATTTTTGCTTTATGCCGCTACAAACCTCATCTATTTGCATTGC
CGGTGTGGTCGATGTCCACCTGAAGACACTCATGCCTCCTATCTCATGCA
GCAGTGATTTTGCTACGCTTGGCCTTCCGTGCGCGTTTCTTTTGCGTCTC
CGTTCGGACGCGTTGGGGTTGTTCTGCCTTTCTCCACAGGGAATCGTGTT
TAACATCATTGGAGACGCGGGTCTCACCCTGGCAGAGGTGAGGAGTCAGT
CCTGCAGAGTATGTTGAAATACGATGAGATTTGTATGAGATACGATGTAC
GACGAGAAGCGATGTTCAGCTATCTCAGCTTCCTGCCACAGAGGAGACCA
ATAACAATAAGTACGACCAAAGGAAACAGCAAATTTTACCGAAACGTCCC
GCCGCGAATGCTGTGTTTTTTTCGGATCAACACCGGTGTCATTGAGCGTC
GTTGGGTACAACCTACTTCACGCCTGCAGCTCTCGTTGCGATACAAAACA
GGGCACTCAACCCGTCGGCAAGAAGGCGGTCCCCTAAAACTATCGGGCCT
GTAATACCGAACCACCCCATGCTGTCCATACCTGTTGCAAACATATCTGA
AAATACAACGATGTTTTGTGTTGCGCCTGCCTTGCCTTTGGCTTCGTTTC
GTAGATCAACGAGGCGGCCAGCGTCATCTACGCAAACGTCGATCCTGACG
CCAACATCATCTTCGGAGCCCTCGTGGATACGGATGTCGCGAGTGAGTGT
CCCCTCACACGGAGGTCCCCACCCAAGCTGTGCCAGCGAGCGTGTTTGTG
TTTTGCCCCAGTCCACGATAAATTCGAGCCCCAATACACCCAGACCCACT
GCGCTGATCTCGGCGAAAGACTTGAATTCTCGCAGCGGGTCAGGAGCAAC
GTTTTATCTTGTTTTGAAGGAAGGTGGTGTGCAGAAACCGTAGGTATTTT
TTTTATGTGCCTGGCCAGTGCCTGCCCGAAAGATCTCTCTAACCCTACCC
TTAACCCTAACCTAACCCCTTGGATATGCGGTTACTCTCAATCATCTCTC
CCTCGACGAGTTAGATGGAGAGTTGCAGATTACTGTTTTGGCGACTGGTT
TCGAGGACGGCAACACCCGCCGCGGTGTCCGGTCCTCTGCTGCTGGTGGT
GCAGGTGGTGCTGCCAGGTATCCCTTCCCTAGACTGTGCGACGGGGCCAA
TGTAGCAGGAATTTTCACCCGTTTCATCACATCTCGTACATTCGTCGTGT
TCCTGTGGTTGTGTGCACGATGACTTCCCAGAAAAAGCTGCAGTACGTAG
GTGCGGTTGTCGTGCAACAGCGTGCCGTGTGTGTGTGTGTTTTGTTATTG
GCATCGACCGTGCTAACCCACCGACCCAATGCAAAGACGTATGTGTGTAG
ACGTATGTGTGTGTCAGTGTCAAGTGTACTGGTCTCATTTATCCTGGCGC
CAGTCCACACGCCTGTCGGCGTATATGTGTGATGGATCAGCCGGGGTCAC
ACAGGCGCGTTTATGTTTCGATTGGCCCACCTCCTCCTGCGGTACTTGCC
TTCGTTGTTATCGCTGAAAGGTTTCAGCCGTCCCTTTCCCGTGAAGCCAA
GATGTGTCGTACTCGCGAAAAAATAAAACGTTTTCCGCTGCAAATTGCAG
GAAATGAAACACCATGAAAACCATCGTTGTTTGTCCCGAATTTGCCCCGT
CACCTGTGCTGGCATCCTTCGTGCGATTGGCAGGATGCCTGGCAGTGGGA
GACCGGTTATTCGTACACAGGTGAGCGTGGTAGAAGAGTACAAACGCCTT
CTTATGTGGAGCGCATCAGTTTGTCGCTGACAAGGTTCAGTGTTCAAGTG
TATCCATCCTCGAGCAAGTGTCGAAAACACGGCTCTCATGTTTCACCATG
GCAACGAGCGACCATGGCGGTCATATTCCATTCTGCATTCGAGTATTTTA
TTCTCGACAGCGACGATATTTTCTTTCCCGCTACCTCGGACAAAGGAACC
GAGCTATTCGATACCTAGGCGAGTTCATGGTGTGTATCACCAGCACAGGT
TAATGGCACTCTAGCTGTGATTTTAACCCAGCTGTGATTTTAACCCTACT
GTTGCCATCGCGCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCATGTTACTGCTGATGGCGAAAATGAAGATCCCTCCCCCGA
TGGACCGACGAGCAGCGAGCTACGTCAAGGAGCAGCTGGTGTACAGCCAG
ATCAAGCCGGAAGACACGCCACCGCCGTTGCCGTCTCTCGGCACCGCCCA
GGGAAGCAGAGACCCGTTCCAGAGAGATCAGGTGGGAACGGAATGCGTTG
CGAGGGTTTGGATCGATCGTTCTGTGGCGGCTAAGACCGCTAGCGGAAGA
GAGACGTGGGTGTCGTTGGTGGTTGGCATGCACGCGTGCTTACTCATGTG
GTGCCAACCAAGGGCTAGTTTGGTCAGTGATCGTTTTTTGCAAAGCGAAC
TCGCAAAAAAAAGAAGGCGTGATAAGAAACGCTGCCTTAGCGCGGTGCCG
ACCGGACTCTCCCGCAGGGATGGGACCTAGCCGCCATCCGGCGACCCGAA
GAGTTAGCATTTAGCCCGCTCCCGCGGTAGGTGTCGTGGCGGCGGAACTT
GAGTGTTCGCTGCCCTCCTGTACAGTATGATTATCGACTGGGGTCAGTTT
TCCAATCTCCTGTTACCTGGAAAGGAGAGACTGGCATAGATAGCGCTACA
CGCTACACACTCTCACGACACGCACGGCAATGTGCAAGAGTGCCCACGGT
AACGAACAATGCTTCCCCCAAGAGATTCATTCCTGGGCAAACACAGACAG
ACGTAGCCGATACATTCCTGTGAGCGACGACAGGTGGTTTTAATACAAGC
ATGGTCTTGCGTAATGGAACTTTTCTTTTATATTGTTTTCTTGGTCATTG
GTGTTGCGAGACTCGAAACCATCGTTGTTCCGTAGTTTTGAATGGCGAGG
GAAACAACAAAGCTTTCAGGTCGTAGCGGCTAGTCAAACATGCAACGTAT
TCCACGAAAACAAGATTAGAGGTGGTGATATCCATCCAATCCCTCGTCCT
TCCCCATGTTGCCTGTCTTTCGCTTGGTATTGCCAGCGACCGGCGAAGAA
GAAGCGGGGTATCCTGGGATTCCTTCGGCGTATTCTGTTCGGAAAAAAGC
AATAAGAGTTGGCGTCGGGGGGTTGTTGATTATACAATTCACGCATCTGG
AACAATCGAAGCCCTTTATTAGTTGGTGGGTCTATGTCCCTTTTTAATTT
GGTAAGTCTTTGTCGTCTTGAAGAGTCTGTAGGAGTAGTAGTCGGATGTG
GAGATCTCGTGTGTTGTACATGCCGTCGTTGGTGGTGGTTGTGGCTGGTG
GTCCACGAGGGGAATGGTTTTCGGATACCTGCGAGTGTTGTCTGTTCCGT
TTTTCGTCAGCTTTGAGTGCTTCTGTCAATCGCCAGAGAAAGTAGAGAGA
AAGGCCACTCCCTGTTTCTTCTCGCCAGCCTGTGTCCCAAACTTGACGTA
CTTACCTCTCCTCCTTTGCTTCAAGCCATTCTTGTGTGACGAAACCTTGC
TCAGGGTTGCTCCCCTCTTCCCAGCATTGTTACAATCCTTGGAGTTGCTT
CCTAAGGGCAAGGACTACCTACCGCAAGCATGCTCTCTGGGACAACTCAA
GCGAAAATGTTTCAGTGAATGAGGTGGTGTATCCTCGACAAGCAGGTCAT
TGTTTCTGTCCTTGATACGAGGCGGTACCTATTAGTCAGGGGGGACAAGG
TCGGTGAGAGGTTTGACGAAGGAAGCCCATACACCGTGGGAGGTAGTGGC
AAGGAAAGTTTGGCGTTCTAGGCTGCTACGATACGATGAGTTTTTTTATA
TGGGACAGGGCCGCCGCGTGAGGGAGAGGATGGAATTGAGGGTGGCCGGG
AGTTCGAGTTGTTGTTATTGATGTCTTTTGTCTCCTGTCTCTTGTGT
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Coding sequence (CDS) from alignment at Scaffold_11:534064..539810-

>EsuBft1043_5a-0001 ID=EsuBft1043_5a-0001|Name=EsuBft1043_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=552bp|location=Sequence derived from alignment at Scaffold_11:534064..539810- (Ectocarpus subulatus male Bft15b)
ATGGGGCTAATTCGAGATCGCATATCACTGGCCAACTCCTTGCAGATCGT
ACCTGAGGACACCCCCGTGCAAGATGCGTTTCTCGTAGCGGACGACATTC
TCAGGCAGGGCGTGGTGGGAATTTCGGAGATCATCATCAAGCCCGGATTG
GTCAACGTTGATTTCGCCGATGTCAGGTCTGTGATGAACAAGGCCGGGAC
TGCCTTGATGGGACTCGGAAAGGCCAAGGGAAAGAACAGGGCTGCCGAGG
CTGCAAGAGCAGCGATCGAATCCCCGCTGCTCGACTTCCCAGTGACCGAC
GCAAAGGGAATCGTGTTTAACATCATTGGAGACGCGGGTCTCACCCTGGC
AGAGGTGGTGCTGCCAGCGAGCTACGTCAAGGAGCAGCTGGTGTACAGCC
AGATCAAGCCGGAAGACACGCCACCGCCGTTGCCGTCTCTCGGCACCGCC
CAGGGAAGCAGAGACCCGTTCCAGAGAGATCAGCGACCGGCGAAGAAGAA
GCGGGGTATCCTGGGATTCCTTCGGCGTATTCTGTTCGGAAAAAAGCAAT
AA
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