EsuBft1042_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1042_6a-0001
Unique NameEsuBft1042_6a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_419contigScaffold_419:64291..75566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LQF1
ProteomeIdEsuBft1042_6
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsSIGNAL_PEPTIDE
Protein domainsSignalP-TM
Protein domainsSignalP-noTM
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsIPR018962
Protein domainsSIGNAL_PEPTIDE_C_REGION
Ownerapollo_admin@sb-roscoff.fr
Noteprobable adenylate kinase chloroplastic os:oryza sativa japonica gn:os08g0288200 pe:2 sv:2 [Automatic annotation]
Nb exon9
Max annot lvl2759|Eukaryota
Length3729
Hectar predicted targeting categorysignal peptide
Evalue1.48e-265
EggNOG OGsCOG0563@1|root,KOG3078@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF1995
Ec32 orthologEc-10_005390.1
Date last modified2016-06-14
Date creation2016-06-14
KEGG rclassRC00002
KEGG koko:K18533
KEGG ReactionR00124,R00127,R00156,R00330,R00570,R00722,R01137,R01547,R01857,R02093,R02326,R02331,R03530
KEGG Pathwayko00230,ko00240,ko01100,ko01110,ko01130,map00230,map00240,map01100,map01110,map01130
KEGG ModuleM00049,M00052,M00053
EC2.7.4.3,2.7.4.6
Descriptionadenylate kinase activity
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Cross References
External references for this mRNA
DatabaseAccession
GO0006139
GO0009535
GO0009941
GO0019205
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1042_6aEsuBft1042_6aEctocarpus subulatus male Bft15bgeneScaffold_419 64291..75566 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1042_6a-0001EsuBft1042_6Ectocarpus subulatus male Bft15bpolypeptideScaffold_419 66588..75499 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1042_6a-0001-exonagat-exon-30234Ectocarpus subulatus male Bft15bexonScaffold_419 64291..66623 -
EsuBft1042_6a-0001-exonagat-exon-30229Ectocarpus subulatus male Bft15bexonScaffold_419 66941..67103 -
EsuBft1042_6a-0001-exonagat-exon-30233Ectocarpus subulatus male Bft15bexonScaffold_419 67770..67891 -
EsuBft1042_6a-0001-exonagat-exon-30228Ectocarpus subulatus male Bft15bexonScaffold_419 70331..70579 -
EsuBft1042_6a-0001-exonagat-exon-30227Ectocarpus subulatus male Bft15bexonScaffold_419 71076..71225 -
EsuBft1042_6a-0001-exonagat-exon-30231Ectocarpus subulatus male Bft15bexonScaffold_419 73548..73685 -
EsuBft1042_6a-0001-exonEsuBft1042_6a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_419 74090..74224 -
EsuBft1042_6a-0001-exonagat-exon-30230Ectocarpus subulatus male Bft15bexonScaffold_419 74610..74772 -
EsuBft1042_6a-0001-exonagat-exon-30232Ectocarpus subulatus male Bft15bexonScaffold_419 75291..75566 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1042_6a-0001-exonagat-three_prime_utr-418Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_419 64291..66587 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1042_6a-0001-cdsEsuBft1042_6a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_419 66588..66623 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1042_6a-0001-exonagat-five_prime_utr-260Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_419 75500..75566 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1042_6a-0001 ID=EsuBft1042_6a-0001|Name=EsuBft1042_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3729bp|location=Sequence derived from alignment at Scaffold_419:64291..75566- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CGTCGCGTACAGCGACCTCAAGGTCTTACTCTCACCCCTTGCTACCCACT
CAGCCCCATCGAACACCATGACGGCCAGAATTTCATTGCTGGCCGCCGCT
GCGGCGAGCCTGTTGCCGGGAGCACAGGCTTGGTCAAGTATCATAAGTGC
AGCACACGCAAGAGCTTCCTCCAGTACGAGATCGAACGCTGGTCCTCTCG
GGGGCCAGCATAGCTTCGAGGGAGGGATGCGGCAGAGGGGAGTGGGAAAT
GCCGGACTGTACGGCAAGCATTTGATGGCGCGATCAACGACAACAGGGTC
GGTACGCGGGGCCCTACACGCAACAAACGTGCAGAACGAGGTGGCCGACG
CTCTTAGCGACGAAGCTAAGATCACCATCGCCTCCGCCATTAACGGGCTG
CCGGAAGACGTTCTCGCCTACGTCATGGCTTACACGCCGATAGGTGACAC
AGCAAGACAAAAGAACGCGTTCACGGCGGGAGCGTACGTGGTGGATTCGG
TGGAGGTAGTGGCGGTGGATGGGGAGGGGATGGATGTGGCGGCCTCCGTG
CAGACCAAGTCGTTCTTCGGAAAGGTGCAAGAATCGAAGCAAACGGTGCG
GGTGCCATTCGGGGTGGACCGTCCGCTGGAAACATCGGAGGCCGTGAAGC
GGAGGTTGATGGAGATGAGCAGGGAGCAGGGGTTGACGAAAAGCACGGCC
ACAATCTACAAGATCCCTGTAGGCAGCTACGGTGGACTGCCTGTCAACAT
GCTGCTCAACAACGTACCCCACTCGAAGATGGCGAGGAACTTCATCTACC
GGGGGGCGGCAGAGGCCCTCGTGCAGGCGGTGGAAGACCCCACCGTGCCA
CGGCGGATGAAACTGGTGTGCACGGTCCCCGAGCTCAACCCGGCCATGGA
CACGTACCGCGTGGGCACGGTTCTGGAGCTGGTCCGCGAGCTTGCCTACT
CGATGGCCGACGTGGGCCTCAACACGCGAATCCTTATCCAGCCGAGTATG
GGGGAGGGGGTGTTCAAGAGCCTTCCGCTAGCTCTGTCGGGGGTGATGTC
TATCATGCAGGGGATGGACTGGGAGGACGGGCTCGTGGGGTCTCACGTCA
ACTTTGGCCAGCTGGGGAACAAGGACGACGTTTCCGCTGAGGACGACGTT
ATCCTGGTCATCAGCCCCCAGAGCATCGCCGGCTACTCGATCCACCCGCT
GCTGGTGGACACGGTGGAGCAAGCAAACGGACGGCCGGTGGTGATCATCA
ACCCCAACCTCAAGGACCGGCCTAGTTCGGGAGGCGTGATGCAGGTGCGG
GGACGCGGGGAGAGGATAGCGTTCGCCGAGAGCTTCAAGGACATCTACAA
CTTCAGGCTCTTGTACGGCAGCTCGGTGGCCTTCTTCCCCATCAAGGCTT
CCCTCGTTGTGGAGAAGCCCAGGTCGCAGTAGTCTTGACCCACGAAGGGC
TGGCAGTTTTAATCGTTGAGATTTAGATAGGAGAGGGTCTCAGAAGAGAG
AGACAAGACAGTGCCGCCGAAGGGGCGAGGGAGACCAAGCCCGAGGGTCT
CGGATTGCCAAGCTCCACAGGTAGCGCCAAGAGGGACGCGTCCATAGTCG
GGTTTCTTGCTGATCAACCATCAGTAAGATCCTCCGTTCGGATCGTATCT
TGGTCCTACTTTTGTATGTGCAACAATGGTTACAGCACTTCTACACCTGT
CATCCACAAGAAGTTTTTTTCAGAACTTCACTATTTGGAACAGCTGCCTA
GTCCAGAAGCCTACACAACCACCAATGTTGCTGATGTTGGGTCACCCCAT
AGATAAGAAACGCGCCTTGGCAATGTAAGACGTTCTTACGTGATGTGGCG
GAATTATAACCCAAGCTGGCCATATCCATAAACGGACAGACACTCCCTTT
GCTCTTGACCTACCGTAGGTCACCACACGCCCTGACCGATCTGCGAAGGT
TCGATTACTCTGCAGCAAAACTGAAAATGGCGAGTTGGAGCTTCCTTGTC
GCGAGCCTTCCGAAAACGTATCAGTTAGTTTCGGCATCTTCTTCGTCGCG
GAGTAACCGATGAGCTTGAAATGTGTCCGGGGGTGTGATGTCTTGAGCAA
CGCACGGTATTCGCTCATACGCTCATACGCTCCCCGTCGAAGACAAAAAA
AAACAACAACGATCGACCGCGGGGGGATTTTTCTGTGTAATCCCTGCTGG
CACATCTGACACATTTCGAGGCAGATGCGGACGTGAAGTGTAGAACATGC
GCACGAGGTGTATTGAACTTGTGCTTCTATGCTTCTATTAAAAGCCGCCT
TACTCTTTGAGCAGGTCGTAAGTTCAAGCCTCGGTGCATGCGCCTGTTGC
CCATCTTTTTTTGTTCTTACGACTTTTTTTTTCTCAGAGAACACGGAGAC
AACCCGTTGGGCATATTCCTGCCTTCCGTCCTGCCTGCGCACACCGCTTC
TTCTCTCCACAATACCTCCGATAGAGAAGGTGTAACCGTTCCACACGATT
GGTTTGGCAGTACACTCAGGAAATATCACGCCCATCGCAAAAAAAGTGAT
GTATGTGTGTTTTGCGTGTTTGGCAATTTTTATTCATTTGGCGCAGACCA
AAATAGTGAGTTTGGAGCAACAGACTATATAAGCTCGGACCCGCAAAGCT
TCAGGAACTATGACTGTACTCGAAAGAATCATTTCTATAGGTCAGTCTCC
GCTTTGTTTATCCAAAACAAGGCAAACCCACCGATTCCGATGAGGATGTC
AAGTCTTCAGAGCAGTGATGGTTTTTCGGTACTTCCGGGGTATTCCCGTC
AAGTACTTGACTTCGATGACCTGCGGTCTCTTTTTCGGAAGAGACCGACT
CTGTTGGCGAACCTGAGGAACGGTGCCTGCCTGTCCCACCCACAACAACC
ATGCCACAAACAACACCAACGGCGCACGGCCCACGTACAGAACGCGCCAT
GCTTTACGAATGGTCGCTATAGTCCATAGGTTTTAGTGTCGAGGTTCTTA
CCCGAGCTCACAAATAGTGCGCAAGTTCTTCGTCTAAATGTCAACTTTTT
TTTATGGTTCAATTTCTTCTAGGCCCTGACCTGTTATGCCTATTTCTTGA
CATTTTTATGCACCTTTTTCGGCACGTGCGTAAGCTCAAAAGGAGACTTA
TGCACGCTGGTTATGCTCAAAATGGCGACTTATGCACGCTGGTTATGCTC
ATTTTCCTCGCGTGTGCTCGTACTTCTGCACGCTTTTCTTTGTCCCATGT
GCTCGGGCAATGCTTGTTTTGGTCGTTAATGCTCGACATATGCGCGCGCG
GTTGGCTTCGTCGACACGCTTTGTCTGTTATGCCGTCTCCCACTGTCAAA
ATGTATATGGATAATTAATTGTGTTGCTGTATCACACAGCGCAAATTATC
TTGGACTCTAGTCTTTCAGGAAATGTTTCTTCGACGCATCCGACTACTAC
TACTCTGCACTCGTTCGTTCTAATAAGGGTGAAGAGGGGACTACTTTCCC
GCATTCCCTTCACCCTTGGTCATCCGTGATCGCCATTCGGCAGACAGAGT
AGATATATTTATTTCTGGAATCAATCGCGGTAAAATACTTCAAGCAATAT
AAATGCGCCTCCAACAGCCCCTGCTGTAACAGTGTCAAACCCATCAGAAC
ACCAAATCGATTGCTGTCAGTGCCTCTAGAATCATGGACACATTGCATCC
CCCCCCCAATAATTAATTGTCGATGCTAC
back to top

protein sequence of EsuBft1042_6a-0001

>EsuBft1042_6 ID=EsuBft1042_6|Name=EsuBft1042_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=454bp
MTARISLLAAAAASLLPGAQAWSSIISAAHARASSSTRSNAGPLGGQHSF
EGGMRQRGVGNAGLYGKHLMARSTTTGSVRGALHATNVQNEVADALSDEA
KITIASAINGLPEDVLAYVMAYTPIGDTARQKNAFTAGAYVVDSVEVVAV
DGEGMDVAASVQTKSFFGKVQESKQTVRVPFGVDRPLETSEAVKRRLMEM
SREQGLTKSTATIYKIPVGSYGGLPVNMLLNNVPHSKMARNFIYRGAAEA
LVQAVEDPTVPRRMKLVCTVPELNPAMDTYRVGTVLELVRELAYSMADVG
LNTRILIQPSMGEGVFKSLPLALSGVMSIMQGMDWEDGLVGSHVNFGQLG
NKDDVSAEDDVILVISPQSIAGYSIHPLLVDTVEQANGRPVVIINPNLKD
RPSSGGVMQVRGRGERIAFAESFKDIYNFRLLYGSSVAFFPIKASLVVEK
PRSQ
back to top

mRNA from alignment at Scaffold_419:64291..75566-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1042_6a-0001 ID=EsuBft1042_6a-0001|Name=EsuBft1042_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=11276bp|location=Sequence derived from alignment at Scaffold_419:64291..75566- (Ectocarpus subulatus male Bft15b)
CGTCGCGTACAGCGACCTCAAGGTCTTACTCTCACCCCTTGCTACCCACT CAGCCCCATCGAACACCATGACGGCCAGAATTTCATTGCTGGCCGCCGCT GCGGCGAGCCTGTTGCCGGGAGCACAGGCTTGGTCAAGTATCATAAGTGC AGCACACGCAAGAGCTTCCTCCAGTACGAGATCGAACGCTGGTCCTCTCG GGGGCCAGCATAGCTTCGAGGGAGGGATGCGGCAGAGGGGAGTGGGAAAT GCCGGACTGTACGGCAAGCATTTGATGTGAGCCCCTGTGTTGTCGGCGTT GTCTTTGAGGTCAACCCTTGCAACTTTGTTTTGGAGGCCAACCGCATTCT TCGCGCGTGCCTCCTTGTCTCATGAACATGTGTATATCCTCCAATGAGAT CAGCAGATGAACCCGCACGGGGTAGATACAGCAGCTGTTGTTTGGTGATA CACTGGAGCGGCATGAAACATGAATGACCAACTCGCTGGTGCCAATTCAT CCTTCGGAATACATTACAGCAGCGGATCCCCAGGGGGGACACACACCTAT GTACGTACTGCTGTACGCTGTATGACAGCAGTAGACTGGTACGTCTGTGG GCGAAGTACAGACCGCTTTTTTACAATGAACAGCTGCACAAGTAGGCACT TCGACTACAGCAGGCACACATATTTTATTGGCTTGGACAAGTGCTTTGAA TTCTACAGCAGCATCACGCAGCCCCCCTCCATGAGTTAATTCCTGTATGC TTCATCCCATTAAAGTACTCTGTACTCTAACGTTTGATGGGCAGGGCGCG ATCAACGACAACAGGGTCGGTACGCGGGGCCCTACACGCAACAAACGTGC AGAACGAGGTGGCCGACGCTCTTAGCGACGAAGCTAAGATCACCATCGCC TCCGCCATTAACGGGCTGCCGGAAGACGTTCTCGCCTACGTCATGGCTTA CACGCCGGTGAATTACTGGAGTACCTTGTGTGTCCGTGGTACCGTGCTGC AGTTTTCTTGATTCATTGGTGTAGCCTTGGCACGTGCGTTGCGGTGCCGT TCTTGGCGAATGCTTGTCGCTGCCAAATGTCGTGGTCGATGGCTCACGCT GTTCAAATATGCGGACTAGGGCTAGTCGTTTCGTCGTCGCCATCGTGAGA ATGTTCCGTGTGCTGTTGCGGTATATCGTGGTGACGACTTCGCTTGATCT TTCTGGGCTCAGCGAGCGAAAGGATTCATTTGCTATTTCCGCTTCACCAC GTGCCCCCCGGTACCAACGGTGAACACCCCCAGGCTTCCCCTCGCGCTTC AGGGAAATTTCGTCACCTCCCGTTCTTTTTTGCCTTTCTCAGATAGGTGA CACAGCAAGACAAAAGAACGCGTTCACGGCGGGAGCGTACGTGGTGGATT CGGTGGAGGTAGTGGCGGTGGATGGGGAGGGGATGGATGTGGCGGCCTCC GTGCAGACCAAGTCGTTCTTCGGAAAGGTGGGTTTCTCAACCGCTTGCTG TCGCTGCCGTTGCTGCGAGTGTGTGTTGTGTTGAAAGCGTGACATCGTTA ATGTTGCAACAAGTTTCCGCCTTTCTCACTAGTCAAGACTGCTGCTGCTC CGAAACTCGTAAGTCCACCTTGCGTTGAACAGCCAGCTTGCAGGTGCGTA TGCTGGCCTCCCTGTCCCTCTGTCTCTCCTCTCACTCGAGCGAGAGCCTG GGACCGAGCACAGGACGCATACAAGGCACCTCCCGACATTTGGCCGTATC CCGTGCCACGAATTCACGCTGAACAGCCTCTTCGTGACCAAGAAAGTTAC GTATGCACGTTATCTCCAACGCGCAAACAGCCTTACTGCGATCAACAGAG CGCCTCCCAACCGTGCGTCCCCGTTCTCAAGGTGCAAGAATCGAAGCAAA CGGTGCGGGTGCCATTCGGGGTGGACCGTCCGCTGGAAACATCGGAGGCC GTGAAGCGGAGGTTGATGGAGATGAGCAGGGAGCAGGGGTTGACGAAAAG CACGGCCACAATCTACAAGGTGCTATTCATAGACCATGAAACACACGAGT CATGAGTGCATGATAAGTCGATTTTTGAGTGCTTGCAGTCTAAAGCTGAA GCGAATTGAGCAGGCGACGTGTTGTCGCTTGCTGGCCGTCTTTTCCGTCC CTCGCCGTTCCATTTTCTTGTCTCCGCCTTTTGTATCTCGTCGAGCATGT CTGTCGTCGATTTGCTTTTGTGCCCTCTCCCTCTCCCTCTCTTCTTGTTT GAAGTCCTATGTCTGTATTTCTCTATCCGGTTGACTCTTCAGACTCTAGA TCATTTTTGTTGTTCCTAAATGCATAATGCGAACGAGCCGCGTGGGGGCA CAACACAACCATTGTAGGTTCCCCATCCTCACTTGAAAAGTTTTAATTAG TATGGTGCCTCATTTGAAAGACCCTTAGAAGCCGTTATTGAGCCATATTT GCCAACCTGAGCGTATTACTATTGTGCTACACTGTATCCCTTTTAGGCCC TGCGCCAAGATTTATCCTTGCGGGTCAGAGCTGTATGGATTTTGTCCCCA TTTCTGGTACAGCATCAACATGAGATATGACACTAGACTTATGGGCTGTT GGTCTTTATGCCTGTCTCTCTGCTGCTCTACCAGCACATTTTCACCCGCC TCCAACAAGGGCTTCAAGCGTCGTATCTACCAACATCGTGGTACTTTCAC TTTGCTACATGAGCTTTCCCCCTTAAACTGTTTGTTGTGGTGGTCGGTCA ATCCTGCGAAATGCATCATCTTGTATGGTGTGAAAAGAGCCATGCGTACG CACTCGCGGCAGCTTCGCACTTCACAACATATTGCAAAGATAGCGACAAC CGTGGAGTGGAGAAATTTCGGACCTGAATCAAGTTGACTGCAATGTCACG GACCCCGGTCGGAATGGAAATGACAACCATCGAGGCAGAAACGGGCGCGC AGGGACACACACAGACTCGTTTTTAGCTTGAAAGTCTCATGGTGGTGTTC GTTAAAGTACAGCTACCAAAACCTATTGACGTGCGGTTTCGAGTTTTTTT TTTCAGGGGTCAAAATATGCTATTGCTGTGCCGCTGTGTGCGCTGTTGTT GGAAGCTTTCTTGGACAACCAGCAGTGTTGTTTTCTTCGACGATGAAGGT GCAGCTTTGCAGCTGACTGACGTTGTACTGCCTGTGGACAGCCTACCTAA GACAGACATCCCTGCCAGCTCCGGCTACCGTCGGAACATAGTAACACCAT CATGAGGTCTCAAGAAGTCTATTCTCTCTTGAAAGCTGGAACCCCTATCA CAGAGGTAGAAAAGTTCCCACCTGTAACTGCGTTGCTGCTCACCAGCAGC AACGCCTTGGAACACATGTCCATTGCACGACGACCCCTGCATGCAAGATC TGTAGCGAGGCGCGATTGTGTGCTTCCGAACAGCGAGAGCATTGCCAACC GTAGTCCGTTCGGTACGGCGCAGATAGAGTTGTGATAGGTGCTTGTTGGT TATTGTAGCTGCTGTTAGGCGAAGAGCTGGCTGTGTGGGCACTCTCTATG CCTCTGCTGTTCCTCCACGATTGTGACGATCGCCAAAGCACAACATTTAA TGGAGCCGCCTCCGAGGTGTCCATCAATTAATTAAGCATGACTATTGTGT ACGAAGCATTTGCACGATTACAAAGCATGATCCCCGTTTGAGTGTGTTCG ATCACCACACCAGGGGGGGAGGGGGTGCTCATAGTCGTGCATGCCGTAGT CGTTTGACCGTTGACCTCGCATCCCTACAAAGTTGGGAAGGAACATGCCG GGTTCTCATCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAG GTTTTCGGCGAGTCGCATGGAGGGTGCGCTGCATCTTGCTAAGGTGTTCG GCATCTTGTGCTTCCGGAGACGGTTATAAGCGCTGTATAACTGCCTCGAG GGTGCTTGACCAATTTTACCCAATGTGGTGCGGCCATCCCCTTTGCGCGG AGTGAGCGTTGTCGACCCCGCACAATATGATCTACTCGACCACCATTATG GTCACCGCAAAAAAGCAAAGGAATAACGCGGGAGCCTGGTTGTCGAGTTC ACAAAAACCCAACCCCGAAAGCTCTTCGGAGGGGGGCAGGGGGGCTTCAG CCATCCCGGGTGAATACCTCCTTTCGTTTACCTCTATGTTGTTCACTCTC TTAACATCCTTAGCCCATTTCTCATCCTGTATGTCGTACACTCTCGCCCC CCTCACCCCCCCCCCGTATCCCCTCCTCCACTCACCTATCTCTCTCTCTT TCTCTCTGCCCCGCTCTGTCCCGCCACCTCCTTACCCACAGATCCCTGTA GGCAGCTACGGTGGACTGCCTGTCAACATGCTGCTCAACAACGTACCCCA CTCGAAGATGGCGAGGAACTTCATCTACCGGGGGGCGGCAGAGGCCCTCG TGCAGGCGGTGGAAGACCCCACCGTGCCACGGCGGATGAAAGTGCGAACC CCCCCGAAAACGACATTCGGTAGCTGATACGACGTGCAGGTGTTTTTTGT TCTTTACCGCTGGTTGTTCCGGAAATGCCCTGCTTGTAACTGACGTGACA CTGGTGCGATCGGTTGAAAAGCCATTTTCCAGGGGGTGGCGGAGGCCCTC GCTGTTGAAGCCACGACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCCCCCCCCCCCGCACGTGAATGGAGGGTGCGCC TACCCGCTGTTCGCGTGGCTTTAGAACCTTACAATCACCCAGTGCACCAT TACGCAAAGACTTCTCTCCGCCTCTTCGTTGCTCGTCGTGTGCTTAAAAC GTGTGTAGAGACATATTGCCGATGTCCCCATTGACGCGGCTTCAGAACAT ACCATATCATGCCACCCTGTACACCATCGCGTATCAAAGACGTGTGTCTC CCTCTTTGTTGCTCGTCGTGTGTGTGTATATATACAGCTGGTGTGCACGG TCCCCGAGCTCAACCCGGCCATGGACACGTACCGCGTGGGCACGGTTCTG GAGCTGGTCCGCGAGCTTGCCTACTCGATGGCCGACGTGGGCCTCAACAC GCGAATCCTTATCCAGCCGAGTATGGGGGAGGGGGTGTTCAAGAGCCTTC CGCTAGCTCTGTCGGGGGTGATGTCTATCATGCAGGGGATGGACTGGGAG GACGGGCTCGTGGGGTCTCACGTCAACTTTGGCCAGGTAAATTCACACTA GTTTCGCCGTGCTGGTTGTCATGTCAACGCCGGCCGGGTAAACCACAAGC GATACGCACTACTGGTTATTGCATCATGTCAACTTTGGCCAGGTAAACAC TCGCCACCCGCAATGCTGGCTATCACGTCAACTGTGACCAGGTCAATCAC AAGCGACAGCGCGCACGCAAGTTCGCAGCAGTTTGCACGCTGGTATTTGA CAATCGACTCAACTGTATCCATCAGGCGCCTTGCCGGTTGTGGTGTGTAC GGTTTCATGAACTTGGTTGCACCGCTGTTGTGGATGGTGGTTGAATTCGC GCAAGAATCGTCTTGCTTGTTGTAGCGTTCCTGTTTCATTTGGTTGTACC GCTGTGGAGGTTGTTGGTTGATTTTTGTGGAAGAAGGCTTGTTGGTTAGC GAGGAATTGCAAAGATGCTCGGATGATGGTGCGAGTCATTGTCAGGCAGG CGCCACAGCACATCCCTTCCTGCTGCAAAACACACGGCGACGTACCGGCA GAATTCTGTTGGGAAGGTGCTCTGACGTGTTGGCACTAATTCCTTCTTAA GAGTCATCCAATAGAGTATGGTGGGTACGCGGTGCTGCTCTGTTTCCGTG GAGTGTGAAACGACTTTTTTTGGCTGGAGGATGTTGCAAAAAATTGCAAA CTTTTTCTGCAACTATGCTCGGGAACTTTGTCAGTAACACTATTGGTGTA CGCTCATTATGGGACGAAAACAAAATTGTGGACGGGACTGGCGGAATGCG GAGGTGTGATACTTTTATTTTTTAGCAACGGCGAGAAGAAGGCACACACC TTTCATATCGCACCGCGAAAAAAACGGTTTGAGCGTGCGGAACAGGGTAT ATGCAACCTTTTCCCTCCACACTCACGATACCCCAAGGCATCTAATCTGG TACCAGAAAGATGCTGGCTTGAGCTAGCTCCCTCGGGGTGGGATTTTGCT GTTGTTGTTGCCTCCTCCTCCGAGAAGTTATCGCTGTAAAACCAAACCAT GAGCACACAGTCCCTGCGAACTTTTACTAACCGCTCTCTGACGTGGGTAT TGTAGGGTCGATCAACACTTTTCCCCCGACGCGCACGATACCGCACAGCA CCAAACCTTGGGCATGAAAGATGGAGCAGAGAGCTACCTCCCGCCGAGTG ACCTTGCTATTGCTGTTGCTTCCTCCTTCGGAAAGTTATCGGTGGATAAC CAAACCCGTGGCGGTCAAAAACACCGAACTTGAACTAACCGCTCCGTGCT CAGCAACTTTTTTCCCGGCGCATTCAGCACCTCACGGCCCCAAACATTGG CATTGCCCAACAGCCCATGGCATCACCTCCTTCCAGATACCATTCATGAG GCAACTCTAAGTTTTCGCCGAGATATCGGTGATCACACCCTTCCCACAAT CGAAGCTGGAGAGGGCCTACGTGTGCGGTAGGGGTAGCAGCTTGACGTGG ATTGGCGAAAGTTGCGCCGGGCAACTTTTCTTCGACACCCTTCGTGGCGA AAAGTTGCAGAAGTTTTCGTCCAGATTGCAACCGAGAAAAAGTTGCAAAA CATTTTGCACAACTTTTAGCTCTCAGGCTGAGCGTACATTGGGAAAGTTA CAAGAAAAGTTGCAGAACTTTAACTTTTCTTGCAACATGTTGAAGCCATA TATGCGGAGTCTCTCTCTTGCCGACTTGTTGGTTCGTGCGGTGCACCGAA TGCACGCAAGCACACCACCAGATTTTGGGCGCGGTGGCCGAGTTTCTTCG CACTCTGTGGGTGGAGGTGCGCACCTAGCACTCTTTGGCTTTTTGCGCTT TTTGTGTCAACCAAGCTGGGTCGGAAGCTTCCCGACCGGCAACTTTTGTC AACATGCCAGTGCTTTCTTGCCGCAGCGATATTTTGATATTTTGGCCCTC GCCTGGTCGACGCTGGGTGTCCCGCCAACCAGATGGGCTTCTTCTAATGC TCAACGAACGTAGGTTTCTTCCTCGATTGCTTGGGGACCAGGGTGTATGT AAGAGCAGTGGCCAAAACCAGGTCCATCAGGTACACCGTAGTGAGTTGTT TTCCCTGCTTGTGATCCAGCTCGATATTTGTGTTCGCTCCGTTGCAATGC GATTATATGCTTTGCTTGAGCACTCCTCTCTCTTACCAAAATGTCCGTGT GAAAAATGCGCATCGAGAAACGGGTAAATGCCGCGCGTTGAATAATCAAA ATGTCTGGAATTGCGCAGGCCATGTGTGAACTAAAGCAAACACGGAAGTA GAAGCGTTGAACGAAAAACGTTGTTGAAGAAAGCTGAGGACTCCTCCCAG CTGAAAAAAAACAGCGGTAGTGTGAATCAGCATACGTTTTTGCTTTTTTC GGCCTTTTTTTGTTAGACCGCTGGAGTTTTAACAACAAAATGTACCTCCC CCATCGTGACGTTGCAACCCAACAGCTGGGGAACAAGGACGACGTTTCCG CTGAGGACGACGTTATCCTGGTCATCAGCCCCCAGAGCATCGCCGGCTAC TCGATCCACCCGCTGCTGGTGGACACGGTGGAGCAAGCAAACGGACGGTG CGGAAACGAAAGACGGGTACTGTAGTAGCCTGCCGTCGGCATACATACAT ACGTACATGCCACGTCGTACAACTAGCCCTGCCCGTCGTGTGTTTCGCCT CTTTGTCGAGAGGGTAGTGGGTGGGGGGGGGCTAGCGCACGGAAGAAGTG CAAGATGCATGCGTGCACCCGTTTAAGTCGCAACCATACGGTGCTCTGCG ACATTGCACTGGGGGTCGTCCTGTCATACCTAGGGCAGGGTTCATGCAAA GGAAGTGGCGGCACCAGACGCTTGTCGACCATACCTGCCCGACCTTGGGC CCGGGGATACTGCTGTACATGGGATTGCTACAGTTTCACCCGATGGTCGC GCCTGCCTGAATCGATCAAAACGGCCAGCGACCACCCTCTCTATATTGAC ATTTTTTTGGTAGACTTTTGACCTTTTCGCTGCACGTGACGTGAGGGTCC GGTAGACGCCCAAAACCGCAAGCTGCACAACGCCGAAGACGGCTACTGGG GACGAAGAGGGGGAAACACAAACACACCAGTCTTCTGGAAGAAGCATCGC CACCGAAGGCCGCAACAACAGCATTGCGTGGCGCTCGTTGACCGAAACGC TTCCTCCGCCGTCTTAGATGTGACCCGACTTTCCACCGCACCGAAACAAA AAAACGCACGCAGGCCGGTGGTGATCATCAACCCCAACCTCAAGGACCGG CCTAGTTCGGGAGGCGTGATGCAGGTGCGGGGACGCGGGGAGAGGATAGC GTTCGCCGAGAGCTTCAAGGACATCTACAACTTCAGGCTCTTGTACGGCA GCTCGGTGGCCTTCTTCCCCATCAAGGTTTGGAAGGATTCGTGTGGTTGG GGGCGGTTGTGCTCGTCTTGTTGCTTGGCATTTTGTATGTGTTGGGGGTT GGGGGTACTATCATAGTTTGTCGTTTGCCATAGCCTGAAAAAAATGTACT TTCTTTGAAATGAGATTTCCTTAGGGCCACATCACAGCCTGAGAGATTTT GTGGAAACAGAAAGCGGGGAGCTACCATTTTGGATCACAGATAAAATGAT GGTATGATTAACTAGCGCCACCAAGGGACCCGTAGAAGTTTTCCCACGCC CAAGAACTCTTCGACTTATTTTTTTTCCAGAATGAGGACACAGGCTTCCC TCGTTGTGGAGAAGCCCAGGTCGCAGTAGTCTTGACCCACGAAGGGCTGG CAGTTTTAATCGTTGAGATTTAGATAGGAGAGGGTCTCAGAAGAGAGAGA CAAGACAGTGCCGCCGAAGGGGCGAGGGAGACCAAGCCCGAGGGTCTCGG ATTGCCAAGCTCCACAGGTAGCGCCAAGAGGGACGCGTCCATAGTCGGGT TTCTTGCTGATCAACCATCAGTAAGATCCTCCGTTCGGATCGTATCTTGG TCCTACTTTTGTATGTGCAACAATGGTTACAGCACTTCTACACCTGTCAT CCACAAGAAGTTTTTTTCAGAACTTCACTATTTGGAACAGCTGCCTAGTC CAGAAGCCTACACAACCACCAATGTTGCTGATGTTGGGTCACCCCATAGA TAAGAAACGCGCCTTGGCAATGTAAGACGTTCTTACGTGATGTGGCGGAA TTATAACCCAAGCTGGCCATATCCATAAACGGACAGACACTCCCTTTGCT CTTGACCTACCGTAGGTCACCACACGCCCTGACCGATCTGCGAAGGTTCG ATTACTCTGCAGCAAAACTGAAAATGGCGAGTTGGAGCTTCCTTGTCGCG AGCCTTCCGAAAACGTATCAGTTAGTTTCGGCATCTTCTTCGTCGCGGAG TAACCGATGAGCTTGAAATGTGTCCGGGGGTGTGATGTCTTGAGCAACGC ACGGTATTCGCTCATACGCTCATACGCTCCCCGTCGAAGACAAAAAAAAA CAACAACGATCGACCGCGGGGGGATTTTTCTGTGTAATCCCTGCTGGCAC ATCTGACACATTTCGAGGCAGATGCGGACGTGAAGTGTAGAACATGCGCA CGAGGTGTATTGAACTTGTGCTTCTATGCTTCTATTAAAAGCCGCCTTAC TCTTTGAGCAGGTCGTAAGTTCAAGCCTCGGTGCATGCGCCTGTTGCCCA TCTTTTTTTGTTCTTACGACTTTTTTTTTCTCAGAGAACACGGAGACAAC CCGTTGGGCATATTCCTGCCTTCCGTCCTGCCTGCGCACACCGCTTCTTC TCTCCACAATACCTCCGATAGAGAAGGTGTAACCGTTCCACACGATTGGT TTGGCAGTACACTCAGGAAATATCACGCCCATCGCAAAAAAAGTGATGTA TGTGTGTTTTGCGTGTTTGGCAATTTTTATTCATTTGGCGCAGACCAAAA TAGTGAGTTTGGAGCAACAGACTATATAAGCTCGGACCCGCAAAGCTTCA GGAACTATGACTGTACTCGAAAGAATCATTTCTATAGGTCAGTCTCCGCT TTGTTTATCCAAAACAAGGCAAACCCACCGATTCCGATGAGGATGTCAAG TCTTCAGAGCAGTGATGGTTTTTCGGTACTTCCGGGGTATTCCCGTCAAG TACTTGACTTCGATGACCTGCGGTCTCTTTTTCGGAAGAGACCGACTCTG TTGGCGAACCTGAGGAACGGTGCCTGCCTGTCCCACCCACAACAACCATG CCACAAACAACACCAACGGCGCACGGCCCACGTACAGAACGCGCCATGCT TTACGAATGGTCGCTATAGTCCATAGGTTTTAGTGTCGAGGTTCTTACCC GAGCTCACAAATAGTGCGCAAGTTCTTCGTCTAAATGTCAACTTTTTTTT ATGGTTCAATTTCTTCTAGGCCCTGACCTGTTATGCCTATTTCTTGACAT TTTTATGCACCTTTTTCGGCACGTGCGTAAGCTCAAAAGGAGACTTATGC ACGCTGGTTATGCTCAAAATGGCGACTTATGCACGCTGGTTATGCTCATT TTCCTCGCGTGTGCTCGTACTTCTGCACGCTTTTCTTTGTCCCATGTGCT CGGGCAATGCTTGTTTTGGTCGTTAATGCTCGACATATGCGCGCGCGGTT GGCTTCGTCGACACGCTTTGTCTGTTATGCCGTCTCCCACTGTCAAAATG TATATGGATAATTAATTGTGTTGCTGTATCACACAGCGCAAATTATCTTG GACTCTAGTCTTTCAGGAAATGTTTCTTCGACGCATCCGACTACTACTAC TCTGCACTCGTTCGTTCTAATAAGGGTGAAGAGGGGACTACTTTCCCGCA TTCCCTTCACCCTTGGTCATCCGTGATCGCCATTCGGCAGACAGAGTAGA TATATTTATTTCTGGAATCAATCGCGGTAAAATACTTCAAGCAATATAAA TGCGCCTCCAACAGCCCCTGCTGTAACAGTGTCAAACCCATCAGAACACC AAATCGATTGCTGTCAGTGCCTCTAGAATCATGGACACATTGCATCCCCC CCCCAATAATTAATTGTCGATGCTAC
back to top

Coding sequence (CDS) from alignment at Scaffold_419:64291..75566-

>EsuBft1042_6a-0001 ID=EsuBft1042_6a-0001|Name=EsuBft1042_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1365bp|location=Sequence derived from alignment at Scaffold_419:64291..75566- (Ectocarpus subulatus male Bft15b)
ATGACGGCCAGAATTTCATTGCTGGCCGCCGCTGCGGCGAGCCTGTTGCC
GGGAGCACAGGCTTGGTCAAGTATCATAAGTGCAGCACACGCAAGAGCTT
CCTCCAGTACGAGATCGAACGCTGGTCCTCTCGGGGGCCAGCATAGCTTC
GAGGGAGGGATGCGGCAGAGGGGAGTGGGAAATGCCGGACTGTACGGCAA
GCATTTGATGGCGCGATCAACGACAACAGGGTCGGTACGCGGGGCCCTAC
ACGCAACAAACGTGCAGAACGAGGTGGCCGACGCTCTTAGCGACGAAGCT
AAGATCACCATCGCCTCCGCCATTAACGGGCTGCCGGAAGACGTTCTCGC
CTACGTCATGGCTTACACGCCGATAGGTGACACAGCAAGACAAAAGAACG
CGTTCACGGCGGGAGCGTACGTGGTGGATTCGGTGGAGGTAGTGGCGGTG
GATGGGGAGGGGATGGATGTGGCGGCCTCCGTGCAGACCAAGTCGTTCTT
CGGAAAGGTGCAAGAATCGAAGCAAACGGTGCGGGTGCCATTCGGGGTGG
ACCGTCCGCTGGAAACATCGGAGGCCGTGAAGCGGAGGTTGATGGAGATG
AGCAGGGAGCAGGGGTTGACGAAAAGCACGGCCACAATCTACAAGATCCC
TGTAGGCAGCTACGGTGGACTGCCTGTCAACATGCTGCTCAACAACGTAC
CCCACTCGAAGATGGCGAGGAACTTCATCTACCGGGGGGCGGCAGAGGCC
CTCGTGCAGGCGGTGGAAGACCCCACCGTGCCACGGCGGATGAAACTGGT
GTGCACGGTCCCCGAGCTCAACCCGGCCATGGACACGTACCGCGTGGGCA
CGGTTCTGGAGCTGGTCCGCGAGCTTGCCTACTCGATGGCCGACGTGGGC
CTCAACACGCGAATCCTTATCCAGCCGAGTATGGGGGAGGGGGTGTTCAA
GAGCCTTCCGCTAGCTCTGTCGGGGGTGATGTCTATCATGCAGGGGATGG
ACTGGGAGGACGGGCTCGTGGGGTCTCACGTCAACTTTGGCCAGCTGGGG
AACAAGGACGACGTTTCCGCTGAGGACGACGTTATCCTGGTCATCAGCCC
CCAGAGCATCGCCGGCTACTCGATCCACCCGCTGCTGGTGGACACGGTGG
AGCAAGCAAACGGACGGCCGGTGGTGATCATCAACCCCAACCTCAAGGAC
CGGCCTAGTTCGGGAGGCGTGATGCAGGTGCGGGGACGCGGGGAGAGGAT
AGCGTTCGCCGAGAGCTTCAAGGACATCTACAACTTCAGGCTCTTGTACG
GCAGCTCGGTGGCCTTCTTCCCCATCAAGGCTTCCCTCGTTGTGGAGAAG
CCCAGGTCGCAGTAG
back to top