Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft103_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 77 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft103_4a-0001 ID=EsuBft103_4a-0001|Name=EsuBft103_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=771bp|location=Sequence derived from alignment at Scaffold_344:45523..46979+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCGACCAACCAATGAAATTACACGGAACCGTCGGAACCTCCCGAAAAGAC
CTTAGGACGCACCCGCGCGAGGGCGCGGCTCGCCTGTGTGCTTTGCGCCC
TGCTATGGGGCACAGCACAACACCATTGCGCGGTCCCACTCTAGAACACA
TGCCTCATGACACACCCGAGCAGCAGCCGGGCGGTGAAGCCACGCAGATA
CCTGCCGCCGCCGCCGCTGCTGCTGAAAAAAACAGCAGCAGCAGCAGCAG
CAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCGCACCTC
GATTTTTTTTTTTTGGAGGGTCTGCTGGTGTGGGCGCTGCAGCCCCACTG
GAGGGGCCGTCTTCAGACATGTAGATCTCGTGGTTGGCTGATGCGATTCG
GATGCGGTTTGTTGTGTGGTATAGCTGTAAACCCAAGGTAGAGGGCTGTA
TTTCTAAGCTCTCTTTTTCGAGAGGAGCAACGGTCGCCTTGGGCGTGGAG
CAAAGAGCCCAAAAAACATGATTTTTGGTGTTGTTCGTCCGCCCTTTAAC
TTGAAGAGAAAACCGAGCTTGCAGTCACCTCTATTGGACCTGTGTCCAGG
TGTGTGTAACGCATGAAGAGCCATGCTGCTGTCTGGACGCAGAGCTGCCT
GCACAAACAAATTGGATTGAT back to topprotein sequence of EsuBft103_4a-0001 >EsuBft103_4 ID=EsuBft103_4|Name=EsuBft103_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=51bp
MGHSTTPLRGPTLEHMPHDTPEQQPGGEATQIPAAAAAAAEKNSSSSSSS
X back to topmRNA from alignment at Scaffold_344:45523..46979+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft103_4a-0001 ID=EsuBft103_4a-0001|Name=EsuBft103_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1457bp|location=Sequence derived from alignment at Scaffold_344:45523..46979+ (Ectocarpus subulatus male Bft15b)
TCGACCAACCAATGAAATTACACGGAACCGTCGGAACCTCCCGAAAAGAC
CTTAGGACGCACCCGCGCGAGGGCGCGGCTCGCCTGTGTGCTTTGCGCCC
TGCTATGGGGCACAGCACAACACCATTGCGCGGTCCCACTCTAGAACACA
TGCCTCATGACACACCCGAGCAGCAGCCGGGCGGTGAAGCCACGCAGATA
CCTGCCGCCGCCGCCGCTGCTGCTGAAAAAAACAGCAGCAGCAGCAGCAG
CAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCGCACCTC
GATTTTTTTTTTTTGGAGGGTCTGCTGGTGTGGGCGCTGCAGCCCCACTG
GAGGGGCCGTCTTCAGACATGTAGATCTCGTGGTTGGCTGATGCGATTCG
GATGCGGTTTGTTGTGTGGTATAGCTGTAAACCCAAGGTAGAGGGCTGTA
TTTCTAAGCTCTCTTTTTCGAGAGGAGCAACGGTCGCCTTGGGCGTGGAG
CAAAGAGCCCAAAAAACATGATTTTTGGTGTTGTTCGTCCGCCCTTTAAC
TTGAAGAGAAAACCGAGCTTGCAGTCACCTCTATTGGACCTGTGTCCAGG
TGTGTGTAACGCATGAAGTGCCATGCTGCTGTCTGGACGCAGAGCTGCCT
GTACAAACGAATTGACTTGATGTATAGTTTATTCAGTATTAACAGCGGGA
TTCTCAAGAACAAAAAAAAAGAGCCAAATCCGCCTGCCCCCCTCAAATTT
TGCCGAATGGACCGGACGTTTTTTCGGCCCCAAATTCCGCCGCTTTAACA
CCCCGAACTGTGACCCGTCAACATTTGCGGGCTCTCAAATGAAGAAAAGC
TCCACCCAATGTCCGCGGGGGTGGTGTCGAAGGTACCCGCGGTCCTTGAT
CTAATAGTGGTGTTCTGGAACGTGATATGTGTTTCCGCGCTCGTGCGAAG
AGAATATCATGGCCGCGTGGGTCTTAGACGATTTTGGGTTTGGAAGAGGC
AAGGCAAGTGATTAATGAAGTAAGGTAAGTGCTGGCGTTCGTCACATGTA
ATAGTTTCGCCGATGAGGCTCAAAACTTGTTGACAGGATGGAAATAATTC
CTTCCGTAAGCTTATGTCTGCAGGAATTCGACTTCATAATTGACGAGGGA
AAGAATTGACTGGATCCTTCTCGCGATAAACCTCAGAGGCAAGAACCGCC
GAAAGAAGGAGGACAAAAAAAATCTTGGGTGACCCCGGCTAGTGGGTCAA
AATTCTACAGTCACCTCTATTGGACCTGTGTCCAGGTGTGTGTAACGCAT
GAAGAGCCATGCTGCTGTCTGGACGCAGAGCTGCCTGCACAAACAAATTG
GATTGAT back to topCoding sequence (CDS) from alignment at Scaffold_344:45523..46979+ >EsuBft103_4a-0001 ID=EsuBft103_4a-0001|Name=EsuBft103_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=153bp|location=Sequence derived from alignment at Scaffold_344:45523..46979+ (Ectocarpus subulatus male Bft15b)
ATGGGGCACAGCACAACACCATTGCGCGGTCCCACTCTAGAACACATGCC
TCATGACACACCCGAGCAGCAGCCGGGCGGTGAAGCCACGCAGATACCTG
CCGCCGCCGCCGCTGCTGCTGAAAAAAACAGCAGCAGCAGCAGCAGCAGC
NNN back to top
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