Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G718 |
| ProteomeId | EsuBft103_23 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 161 |
| Hectar predicted targeting category | other localisation |
| Evalue | 6.94e-148 |
| EggNOG OGs | 2BKX4@1|root,2S1JI@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_011410.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft103_23a-0001 ID=EsuBft103_23a-0001|Name=EsuBft103_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1616bp|location=Sequence derived from alignment at Scaffold_344:214051..219365+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCTCTTTCCTCTACTTGCCCGTGCACTTTCGCTGTCTCTCTCTCTCGCTC
ACAATCTACGAACCATGGCGAAGGCGGGCGAAGGGCTGTTCAAGAAATAC
ATTCCTAAGGACATCCATGAGAAAATTCGAAACGTCCTGGAGTTCAAGCC
CAAGGACCCCAACCGAGGATGGCAGGTACCTCCGGCGAACGCTGCTACCC
CAGGGCTAAACGCAAAGGAGTACCGCACGCCTGCACCCAACTCGCAGCCA
CAGGCGAACGTACCGGTGTCAGACAACCCCGACCTTCAGCACGACATCGG
GTACTTCAAGAGGGACACCAGGAGGGCGCCGCGACAGATACACTCTTACG
TGGCTCCTTCTCTCAGGATGCTCGCGGATGAACGGGTCAAGGCCCTCGAG
CTTATCTCGAATGAGCTAGGACCTGAAGACCCGGCGCCATCTCAGGGGAA
CAAGAACCCGGCCGTGCTCAAGTACGACCCCACAGGTCTTCGTAGCACCA
TGTCGGCGACCAACGAGGCCTGGGCGGAATCCGTCAAGAAGCACATGCCC
ACCCACAACGTGAAGCCGTGGTGGTGGCATTCCGATGTGGACCACGTGGC
CGAGGCACAGGCGAAGGGACTACCGCCCCCGCCGGGACGCCGCATGGACT
GGGAGGCACCGAAGAGCTCTAAGCTCGCCAGCTGGTAGAGAGAGAGAGAG
ATAGCTTGGACAGACGACGCCGGTTTCTTCCGTGTTTGTGTCTGTTTTTT
TGTCTCGACAAAAGTGTTCTTTGCTTGGTAGTGATTGGGTTGGTCGCCAT
GCGCCATCGTTGGGTGCCAGGGTCTGGTCTCGCGGCAGAGGAGAAGCGGC
TATTGTTTGCGGCGGAGGATATGGGTGGGTGGAAGGCTCCTTGGCACCAG
GTCGACTCTAGCTAGACGAGTCTCGGGGAGAGAGGGTTTCCTTGCATAAT
GCCGGTTCCTCTGGAAGTCGCTTTTGTTTCCCTTGATGCGTTGTAGCGGG
AGCCTTGTCCTTGATGCAAAAAGATTTCTGTCTCCATGCTCCATTTACTT
GTTTGTTTTTCTTGAGCTTGGATAGCTTTAAGCTGCTGGATAGCCAGGGC
AACGGAAGATCAACGGGGAGAAAAAAGAGGTTACGGCAGTAGCGGTAGTG
TTTTGTTTTCGGGGGGGGGGCTCTTGTAGACCGGCAAAGACACATTGATT
CTGTCACACATGCTTTTTTTACGCTGTTCCATGTGTTTGGGGCTTGATCG
CTGTGACGCGAAACTGTCGCGCCAAGGACAGGGCCAGCTCTAATCATATG
GTCATACGCAAACGTGATTCGATTCCATGTTATCATCCTGCTCGGGGTGT
GGTCCTGTTTGTCCGATCGGTATCATGTTCTTAAACGATCTCTCGATCGC
ACCGACCGGTAGGCCGTTCCCCATTTTGCTCCTTTTTTTTCTTTTCTGCT
TCTTTTTTTCGGCAAGCATCTGCTTGAAAAGTCCAATCTGCTCGTTGGTT
CTGCTCCTTTTCGTCCGTTATGCCCTCCGTTATGCTCGCTGTTTTGGGCC
ACTTTTGCTCTTTTCTGCTACTTTTCGGTGGATATGCCCTCTCGTAATGC
TTGTTTTTCCGTCAAC back to topprotein sequence of EsuBft103_23a-0001 >EsuBft103_23 ID=EsuBft103_23|Name=EsuBft103_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=207bp
MAKAGEGLFKKYIPKDIHEKIRNVLEFKPKDPNRGWQVPPANAATPGLNA
KEYRTPAPNSQPQANVPVSDNPDLQHDIGYFKRDTRRAPRQIHSYVAPSL
RMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATN
EAWAESVKKHMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPK
SSKLASW back to topmRNA from alignment at Scaffold_344:214051..219365+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft103_23a-0001 ID=EsuBft103_23a-0001|Name=EsuBft103_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5315bp|location=Sequence derived from alignment at Scaffold_344:214051..219365+ (Ectocarpus subulatus male Bft15b)
CCTCTTTCCTCTACTTGCCCGTGCACTTTCGCTGTCTCTCTCTCTCGCTC
ACAATCTACGAACCATGGCGAAGGCGGGCGAAGGGCTGTTCAAGAAATAC
ATTCCTAAGGACATCCATGAGAAAGTGGGTTTGTTCGTGGGACCCCCCCT
TGTGATATTAGGAAAAAGAAATAGGACAGAAAGTCTATGTTGTTGTCGAT
GACGAGGTGCGGCGGAATCTTGTCAAATCAAGGAACGTCCCAACGACGCA
ACCCACCGTGCGCTGCTTGCGCGTTGCAGCCTTGACAAGTCAGCGTCACT
CGTTGTGCATGGGTTTCTGAAGACTTGACTCGAAGAGTTTACGCATGTAC
GATGAGAAACGAAGCCTAGGTCTATCTGTTCCTTGATGGATAAACAGGAA
GCTGGCATCCTTGTTCAGAGGAGACCTGAGTTTGGCTGCTGCTGTAACCC
TTTGTTTGTGAGAGAAGGGCGCCGGGAAGGATGAAAGCCATCCGGTGCTT
GATTGTCGGTACGACGCGGGCTGTTTTGTTGCAGTATGTGTTGCAAGGCT
ATCCGCTGCGGGTTTTGCCAACGTCGCTTATCTGGAGAAGCACGGAAAGT
CCGAAGAATGTCGACAATAGAGCAGCGTCCAGACGGAACTACCGATGTTT
ATGTTGTGCGGGTATGTGAAGGTACGTGTGAGCTAGGTCTCCTGTCGTGT
GCACTCCTTGGCTCGTTACAAGTGTTTGTTTGCTCTGTAAATTTGGATGC
CTCAGTCTACACTGTATGCAGCAGCACGCAAGTCAAGTTTGAGTTTGCTC
CAGACTCGACGTCGCCTACGTTAGTCTGGTTCATTGTGGTATATGACAAC
CATCCTTGTCAACTCCACGAGATTCATATGCCGCTAGCCTGCGTTTGTCT
GTCTTTGCCCTTCCTGTGACATGATCAAGACCACCTAATGCCAGTTCTCC
CGCAGGTGGACCTTCACAGATCGACCTTGGCCGCTATTGGGCCCTACATT
CAGCTGTGACTGGAGAGCAAAAAAAAAACTCGTCATTGTTTTCCAAGGTC
AAAGGGGGTGTTTCTACTTGCTGCCTCTCTCGCGTAAAGCGACATCATGA
CGACATACTTCGTGCATAGTTCACACGCGATCTCTCACCTTGGACTTTCC
TTGAACATGCTGCTGCTGCTGCTGCTGCTGTTCCCTGTTGCTGCCAAACC
TGGGTGTCAGATTCGAAACGTCCTGGAGTTCAAGCCCAAGGACCCCAACC
GAGGATGGCAGGTAAACTGTAAGCTCAAATCACTCATCCTACAACGAAGT
ATGCAAGGAAAAAAGGATAGGTAGCGCCCGCCCGCCAAGGTCTGGCGATC
GATATCTACAATATCTGGGAGATGTGCGGGCAGGAATCGGTGGACCTCTT
TCCCTCCGCCCATCACACTCCCACCACCATCTCCCTTCGTCGGCCCTTGG
TGCTGCACGGTATGTTCGCGCATGACTCGATTCTCCGTCCATCACATCCA
AACGCTTGAGATCCAGCAACGAAGACAAGAGGCCGGGAAAACCTTAGCTC
CAACGCACACCCTCTCACCCAGGGCCCTCCCCCTATAGCTGCGAACCCTT
CACCCGTCGCGCCCCACCGCCGCCCATGTTGATTTTTTTTGTTCGAAGGT
ACCTCCGGCGAACGCTGCTACCCCAGGGCTAAACGCAAAGGAGTACCGCA
CGCCTGCACCCAACTCGCAGCCACAGGCGAACGTACCGGTGTCAGGTGAA
CCACGCGGGAGTGTTTGTGTGTGGGGGGGGTTCCTCGGTTGCTTTCTTGC
GTGATAAGATCGTTGGCCTCGCATACCGCTGGAGCCTGCGATGGCGTCAA
GAGGCTGGGGAGGGGGGCATGGTCCGAAGACGTGCTTTCGAGAGGGGAGT
GTTTGTGTTCCAGAATTGATGAACCAGCATGAGTCTCTCGTGTGATGTAA
GTCATGTTTTTCGTGAGTGATGCCTGTCACGGCAGGCCTTGTCGGGGACT
CTTGAGGGTCTGGTGCTTCCGAATATGACTCAAAGGACTCCAAAGTGTTT
GGTTGGGTAATAGCACAAAGCACCAGTGCCCGAATTGCACGTGTTGTCGA
CGGTTCGGAACGTAGCTGTACACATGATTGTTGGAGCTTGGATGAGCGTG
GTGTATACCTTACCCGGCAAATGTGCTCGATCAACTCATTCCAGTATTGA
CCCTGCCATAGCGCTCGTTTACACACCCTTGCTTCTCACTGCCAATCATC
AACTGGTGTGACCCCTGGCCCCACGTTCTCGAATGTTCATCCGGTGTCTC
TCTCGCCGCCGTCCCGCTCTTGTTCACCCTCTTTCGACCGGGGGGGGGAT
GTGAATTGGGTCCTGCAGACAACCCCGACCTTCAGCACGACATCGGGTAC
TTCAAGAGGGACACCAGGAGGGCGCCGCGACAGATACACTCTTACGTGGC
TCCTTCTCTCAGGATGCTCGCGGATGAACGGGTCAAGGTGGGTGCATATC
GTATGCATGCGTGTGATGTTGGGAGGGGGAGTGAATGAAGGAATTGTACC
GGAAGATAGCGGAAACAAGCGCGCGGGTTGGGGACCCCACCTGACTGGCG
GTGCTCTCGTGGTGTCCGTCTCTCTGCCAGTGCTGGTGACCACGTTTCTT
TCAATACTCTGGTTCTACCTCTCTTGTCCCTCTCGTTTTACTAGATGAGC
AAAAATTAACGAGCGAACACTTGGGGTGCTGCGATATTCGCCCATCGGTG
CGTGTTCGCCTGCCCGCCGCACCCTTGGTTCCACGAATATGTACGACAAG
TAACACCGGTTTCAACCTGCCTCCACAGACTCAAGCAGGGGCGTGCTCTC
CGAGCGAGAAATCGGCATGACAAGTCGTTTCTCTCACTTCGACCAAATCG
CTCAGTGGGTTATGAACCCCCTTTTCATCAACTGCATGGGGTGGCAATTT
ACGACGCGAGGAAGGGTCTGTCGGACCAGGGCGTGTCGGAAAGGAGGACA
CTCTCGCAAGTTGCGGGGAACGGAAGCACTATCGCCCTCGCCGCCATATG
TGCGCTAGTGCTGCATTCTGCTGCTTCTTTTCGACAAGTTCTTTGGGCTT
TCCCGTTTCGTCTATACAAGTCTAGATGCAAGATGAATTCATCGCTAGCC
TTACATCCAAGTCTTGTTGTTTTGTTTTTCACAGGCCCTCGAGCTTATCT
CGAATGAGCTAGGACCTGAAGACCCGGCGCCATCTCAGGGGAACAAGAAC
CCGGCCGTGCTCAAGTACGACCCCACAGGTCTTCGTAGCACCATGTCGGC
GACCAACGAGGCCTGGGCGGAATCCGTCAAGGTTCGTGTGTGTTTCGCGT
TTGGTGGTGTGGGTGTCGTGTGAGCTTATCCATCGATCTGTGGTATGTGT
ATGTCTTCCTGTGGAAGTTACCCGTCACGTGGGTCTTACCGTTAATATGG
GTCTTCCCCCATGTCCGTCGATGAAGATTCTCTCCTCTTCTTTTTGCACA
TTGGCGTCGCGGTGAGAGGTGGGAGATTGTGGTGAAAGAGAATGCGGGTT
CCAATCCCGCCACCCACGAAAAGTAGTGGTGGTTAACACCAAACACTATT
ATGTATATAGTATGTGGAGGAATAACGAACAACGGAAACAGAGAGTGTGT
TGAAGTTGTGGAAATTTTGGTGACGTGGTGGACGTAGCGCACCCGCGAGA
GTACGCGCAGGAGGTCGCGAAGCAGGGAATCGACTCTCCGTTTACCCTCT
TATAGCCTTCGTGTCTGGCAAACAAGTCATTTAACACTGAGGGGGAGGTG
ACGATTAGAATCGTATCCCATTTCTCCATCGTCCGTCGAAGATAATTACC
TCCCTTCACACTTAGCATCTTGGGCGAGCTGTTGTTGTTACTGCTGGTGA
TGTTTGGTATCGTGTCTGTTGCTTCTTACACTCAAGCACATGATGTCGCC
CTTGGTCACGAAAGTGCTTGAGCCCTCTGGATTGTGTTGAACGTGCGGGT
AGTACAAAAATCGCGTGTGGGCGAAAAGTATTGCAGGCACGCCATTCTTC
GTGCTCTCAAATCCCGTCGTTCTTACCCTCAAGACACAACCTACCTGTTG
CTTTCACGAAGGCGTCAAATGCAGTCGCCCGTTAAACCAGACGCACACAA
CCCCCCCCCCCGATCCCAACCATATTTTTCATTTTTCCGAAACGCCTGTT
CATTCTCTCTCTTCCCTCCCCTCGTTCGCCTCACCAGAAGCACATGCCCA
CCCACAACGTGAAGCCGTGGTGGTGGCATTCCGATGTGGACCACGTGGCC
GAGGCACAGGCGAAGGGACTACCGCCCCCGCCGGGACGCCGCATGGACTG
GGAGGCACCGAAGAGCTCTAAGCTCGCCAGCTGGTAGAGAGAGAGAGAGA
TAGCTTGGACAGACGACGCCGGTTTCTTCCGTGTTTGTGTCTGTTTTTTT
GTCTCGACAAAAGTGTTCTTTGCTTGGTAGTGATTGGGTTGGTCGCCATG
CGCCATCGTTGGGTGCCAGGGTCTGGTCTCGCGGCAGAGGAGAAGCGGCT
ATTGTTTGCGGCGGAGGATATGGGTGGGTGGAAGGCTCCTTGGCACCAGG
TCGACTCTAGCTAGACGAGTCTCGGGGAGAGAGGGTTTCCTTGCATAATG
CCGGTTCCTCTGGAAGTCGCTTTTGTTTCCCTTGATGCGTTGTAGCGGGA
GCCTTGTCCTTGATGCAAAAAGATTTCTGTCTCCATGCTCCATTTACTTG
TTTGTTTTTCTTGAGCTTGGATAGCTTTAAGCTGCTGGATAGCCAGGGCA
ACGGAAGATCAACGGGGAGAAAAAAGAGGTTACGGCAGTAGCGGTAGTGT
TTTGTTTTCGGGGGGGGGGCTCTTGTAGACCGGCAAAGACACATTGATTC
TGTCACACATGCTTTTTTTACGCTGTTCCATGTGTTTGGGGCTTGATCGC
TGTGACGCGAAACTGTCGCGCCAAGGACAGGGCCAGCTCTAATCATATGG
TCATACGCAAACGTGATTCGATTCCATGTTATCATCCTGCTCGGGGTGTG
GTCCTGTTTGTCCGATCGGTATCATGTTCTTAAACGATCTCTCGATCGCA
CCGACCGGTAGGCCGTTCCCCATTTTGCTCCTTTTTTTTCTTTTCTGCTT
CTTTTTTTCGGCAAGCATCTGCTTGAAAAGTCCAATCTGCTCGTTGGTTC
TGCTCCTTTTCGTCCGTTATGCCCTCCGTTATGCTCGCTGTTTTGGGCCA
CTTTTGCTCTTTTCTGCTACTTTTCGGTGGATATGCCCTCTCGTAATGCT
TGTTTTTCCGTCAAC back to topCoding sequence (CDS) from alignment at Scaffold_344:214051..219365+ >EsuBft103_23a-0001 ID=EsuBft103_23a-0001|Name=EsuBft103_23a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=624bp|location=Sequence derived from alignment at Scaffold_344:214051..219365+ (Ectocarpus subulatus male Bft15b)
ATGGCGAAGGCGGGCGAAGGGCTGTTCAAGAAATACATTCCTAAGGACAT
CCATGAGAAAATTCGAAACGTCCTGGAGTTCAAGCCCAAGGACCCCAACC
GAGGATGGCAGGTACCTCCGGCGAACGCTGCTACCCCAGGGCTAAACGCA
AAGGAGTACCGCACGCCTGCACCCAACTCGCAGCCACAGGCGAACGTACC
GGTGTCAGACAACCCCGACCTTCAGCACGACATCGGGTACTTCAAGAGGG
ACACCAGGAGGGCGCCGCGACAGATACACTCTTACGTGGCTCCTTCTCTC
AGGATGCTCGCGGATGAACGGGTCAAGGCCCTCGAGCTTATCTCGAATGA
GCTAGGACCTGAAGACCCGGCGCCATCTCAGGGGAACAAGAACCCGGCCG
TGCTCAAGTACGACCCCACAGGTCTTCGTAGCACCATGTCGGCGACCAAC
GAGGCCTGGGCGGAATCCGTCAAGAAGCACATGCCCACCCACAACGTGAA
GCCGTGGTGGTGGCATTCCGATGTGGACCACGTGGCCGAGGCACAGGCGA
AGGGACTACCGCCCCCGCCGGGACGCCGCATGGACTGGGAGGCACCGAAG
AGCTCTAAGCTCGCCAGCTGGTAG back to top
|