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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 7029.ACYPI088512-PA |
| ProteomeId | EsuBft1032_7 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | PTHR11439 |
| Protein domains | TRANSMEMBRANE |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | copia protein os:drosophila melanogaster gn:gip pe:1 sv:3 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 33208|Metazoa |
| Length | 1938 |
| Hectar predicted targeting category | other localisation |
| Evalue | 6.68e-36 |
| EggNOG OGs | COG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3BGB6@33208|Metazoa,3D5G4@33213|Bilateria,41ZUZ@6656|Arthropoda,3SKEY@50557|Insecta |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | Reverse transcriptase (RNA-dependent DNA polymerase) |
| COG category | L |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0003824 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1032_7a-0001 ID=EsuBft1032_7a-0001|Name=EsuBft1032_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1938bp|location=Sequence derived from alignment at Scaffold_578:129597..134361- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGAAACACTTTGATGTACAATCGACCTCCCGCATCCCCGCTTCCCC TGGTGTCGACCTAACACCGAAGCGAGATGACGAGAAGGGAGGGAAGTGGC CGGTGAGGGAGGCCATCGGCAGCATGATGTGGGTGTCAACGTTCTCGCGT CCAGACGTCTCGTTCGCCGTGCGTGCGGTAACGCGCCACGTCCACGCCCG GCGAAGAGGGCTGGCCGTGTACTGGGATGTCATCCGGAAGATCCTCGGCT ACTTGAAGGAGAAGAGGGACCTCGGCATCACCTACCAACGGGGATCGTGG TTAGGGCTGGCCGTGTACGTACACGCCAGCTACGCCGACACGGAGGATAA GCGTTCGGTGTCAGGGTTGGCGACGACGGTTGGAGGTACCGTAGTCAGTC ATGGTAGCAAGACACAGAGCATCGTGTATTTGTCGTCGACGGAAGCCGAG TACATTGTTGCCGGGGAGGACGTCAAGGAGGCGTTGTTTGTGCGTGCTGT GCTTTCGTTTGTTACCCCAGAGACCAGTGGTAGCAGCATCCAGGTCCTTG AGGACAACCAGGGGGCCATAGCGTTGGTGCAGAACCCCCTCAGCTCAGGT CGCACGAAACACATCGACGTGAGATTTCATTTCATCCGCGGATTGTTTAG TTCGGGGGATATTTCGGTCAAGTCCGTTCCGACAACGGAGCAACACGCGG ACCTCCTAATCAAGGCCTTTAGCAGGGCGAATCTGCAGTACCACCGGCGC AAGTTGATGAATTTGCCGGAGTGGAAACGCAACCAGAAGGAAAGGGGAGA CTTCGCCGACACGGAAAAAGCGGATCCGGAGGGGGTGGGGCTGCGGATGA AAGACGCGACCGGGTGGCGAGTAAGGCGATGCCTCGAAAGGGTCATGCGG CCTACCCGGGGGGGCCAGGGGAAGGAGGCGTCTTCCTTGTCGGCGGCTCA AGACCGCTTGACCAAGGTCCACGCTGGCAACCGTCAGCGCCGGGAGCAGC ACGACAAGGACAAGGCGCGGCGCCAGCGGGCCCGTGTAGCTGACGGCCTC CGGGTTGAACGCTCAAGGGGCCCTGCCGCTGCTATCCCGCCGGAGCCGGT GTCGTCGCCGCCGGCCGCTCCTTCATACGCGACTGCTGCTGCGAGCCCGG CGACCCGCTCCAGTGGACACTCCTTGGTGTTCAAGAACGGAGACGACCTT TTCGCCAAAGGTCGGCTGTCCGATACGGTCCAGGCAGCCCAATTCAACTT CCGCTCGGCCGACAGGGAACGCGTCCTCCTTACGGCCACCCGCGTGGCCG TCGACGTGCCGGTCGGAGCGACCGTCTCCGATGCTGTGCACGCCGCAAAA CACAATGCGGAGCTTCACGGCAAGGTGGAACTCCTGGTCTCCGCTCTTCG GGCGGCCCACGGCCGCGTGACCCAACAGGTCCAGTGGCTAGGGTGCACCA TACCATCTGCTGCAGCTCTGGCGCCTGTTCCGTCCGCCACCACCTTCGAC CTCCCGCCTCCGCCGAAACAGCACAAGGCCGGTGCTAAGAGTGGTGGGCG TGGGCCGGGTAAGGGGTCAGGGGGCAGCAGTTCTGGCGGCGAAAACGACT CCAACGGTTGGTGTCGCTCCAACGATTCCGGAGCTGGCCGGTGCCACCAA GGAGGCCGCCCGCGGGACGCATCTTCGGATCGGCGCCAAGCGGGAGGCCA CCAGCGTGATGCTGTTCTGACCAGCGCCAGCGTGGCCGTGCTCCTGCTGC TGCCGCCTCTTCTTCATCTTCGTCCTCCGGGCAGAAGAAGAAGGTTCGGA GGGGCGCCCGCCCCGCCGATTCGGTCAGCGGAACCAGCTTTGGCTCCGCT TCGGAAAACAGTCTTACTCGGAAGGCTCCCGCTGGCAAACGGGATGACTC AGGTCTTTCCGCTTCCGGGCAAGTGGTACCGTCGTTAA back to topprotein sequence of EsuBft1032_7a-0001 >EsuBft1032_7 ID=EsuBft1032_7|Name=EsuBft1032_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=645bp
MVKHFDVQSTSRIPASPGVDLTPKRDDEKGGKWPVREAIGSMMWVSTFSR PDVSFAVRAVTRHVHARRRGLAVYWDVIRKILGYLKEKRDLGITYQRGSW LGLAVYVHASYADTEDKRSVSGLATTVGGTVVSHGSKTQSIVYLSSTEAE YIVAGEDVKEALFVRAVLSFVTPETSGSSIQVLEDNQGAIALVQNPLSSG RTKHIDVRFHFIRGLFSSGDISVKSVPTTEQHADLLIKAFSRANLQYHRR KLMNLPEWKRNQKERGDFADTEKADPEGVGLRMKDATGWRVRRCLERVMR PTRGGQGKEASSLSAAQDRLTKVHAGNRQRREQHDKDKARRQRARVADGL RVERSRGPAAAIPPEPVSSPPAAPSYATAAASPATRSSGHSLVFKNGDDL FAKGRLSDTVQAAQFNFRSADRERVLLTATRVAVDVPVGATVSDAVHAAK HNAELHGKVELLVSALRAAHGRVTQQVQWLGCTIPSAAALAPVPSATTFD LPPPPKQHKAGAKSGGRGPGKGSGGSSSGGENDSNGWCRSNDSGAGRCHQ GGRPRDASSDRRQAGGHQRDAVLTSASVAVLLLLPPLLHLRPPGRRRRFG GAPAPPIRSAEPALAPLRKTVLLGRLPLANGMTQVFPLPGKWYRR back to topmRNA from alignment at Scaffold_578:129597..134361- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1032_7a-0001 ID=EsuBft1032_7a-0001|Name=EsuBft1032_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4765bp|location=Sequence derived from alignment at Scaffold_578:129597..134361- (Ectocarpus subulatus male Bft15b) ATGGTGAAACACTTTGATGTACAATCGACCTCCCGCATCCCCGCTTCCCC
TGGTGTCGACCTAACACCGAAGCGAGATGACGAGAAGGGAGGGAAGTGGC
CGGTGAGGGAGGCCATCGGCAGCATGATGTGGGTGTCAACGTTCTCGCGT
CCAGACGTCTCGTTCGCCGTGCGTGCGGTAACGCGCCACGTCCACGCCCG
GCGAAGAGGTACTGGGATGTCATCCGGAAGATCCTCGGCTACTTGAAGGA
GAAGAGGGACCTCGGCATCACCTACCAACGGGGATCGTGGTTAGGGCTGG
CCGTGTACGTACACGCCAGCTACGCCGACACGGAGGATAAGCGTTCGGTG
TCAGGGTTGGCGACGACGGTTGGAGGTACCGTAGTCAGTCATGGTAGCAA
GACACAGAGCATCGTGTATTTGTCGTCGACGGAAGCCGAGTACATTGTNG
GGTGTCAACGTTCTCGCGTCCAGACGTCTCGTTCGCCGTGCGTGCGGTAA
CGCGCCACGTCCACGCCCGGCGAAGAGGTACTGGGATGTCATCCGGAAGA
TCCTCGGCTACTTGAAGGAGAAGAGGGACCTCGGCATCACCTACCAACGG
GGATCGTGGTTAGGGCTGGCCGTGTACGTACACGCCAGCTACGCCGACAC
GGAGGATAAGCGTTCGGTGTCAGGGTTGGCGACGACGGTTGGAGGTACCG
TAGTCAGTCATGGTAGCAAGACACAGAGCATCGTGTATTTGTCGTCGACG
GAAGCCGAGTACATTGTTGCCGGGGAGGACGTCAAGGAGGCGTTGTTTGT
GCGTGCTGTGCTTTCGTTTGTTACCCCAGAGACCAGTGGTAGCAGCATCC
AGGTCCTTGAGGACAACCAGGGGGCCATAGCGTTGGTGCAGAACCCCCTC
AGCTCAGGTCGCACGAAACACATCGACGTGAGATTTCATTTCATCCGCGG
ATTGTTTAGTTCGGGGGATATTTCGGTCAAGTCCGTTCCGACAACGGAGC
AACACGCGGACCTCCTAATCAAGGCCTTTAGCAGGGCGAATCTGCAGTAC
CACCGGCGCAAGTTGATGAATTTGCCGGAGTAACTGTAGCAGTTTCTAGC
ACTTGGGAGAGGTCATGTTTTCCATGCGGGGAAAGGCGCATAACTGCTGC
GGTCTGTGTACTAATGGCAGGAGTAGTTCCTCGCGTTCTTGTCTTCGCCT
TGGCCTTTCTAATAAGTGCGGCCGTTGTGATCCACTGTGATAGCGACGGT
TTTTGTGGTGGTAGGGTTTTTTTCGAGGGGTTTTGCCCGGACGCCGGGTT
TCCCCTCCATACATTACCATGTTGGAATTTTCTGATGTATCCAGGGGCGT
TCTGCCCCATTGATGGTTAGTCATTTGGGTGAAGAACCAGGGAGGGTGTT
CGTGGGTCTGCGAACATTGGTGTTGGATACATGTGCTGGATGATTTGGCG
TCACGCAGACTGGCAAGATTTCCGTTGGTAGGGGTCACCGCGATGATTCA
CGGGGCCCCTCCTTGCTGTGGGAGCCGACCTTTGAGCACTCCCTCATTCG
TCCGTTTGAAGGACGGTCGTCTACCTCTCGTGAAGTTAATACATCACCAA
AGCAGTCTCACCCGATAAGTAAGCGACGTAGGCCGCAAACAAGTTTAACA
AGTGTCCTTGGACGTGTGTGTGTGGAGGTATAGTAGTACTGCGTGATACA
TCGGCAGAGACACGTCCCATTCGCTGCTCTGTGCGACAGCTAGGTGAGTA
GTTTGTTCCGGAGGAACGCTTCCCAACCGCTCTTCTTGTGCATCTCATGT
GCGATCCTTGCGTGGTGTTCGTCATTCGGCAAGGGCCGCAAACAAGATAC
ATACGCTAGGGAACCGCGCGATCACGTGCGACGCCTGACGTGTATAGCGT
GTCCTCTTTCAAGCGTTTGTGGGTAGTCGTGCAGATAAGGTCGAAACGAA
TATGGTAGTACAATTAGCATACTAGCGGTCGGCCAAGTGTCAATGAGTGC
GTTGAAACTGGGAAGTGACATTAGGTGCATGTAAATTGATCGCCTTGGAC
ATTAAGCGCCGAATATCTCGGCAGACGAAGCCCGACGCATGCATTGTGAT
TCAACCGTCGCCGCAGCTGTGTCGTTGACGACAGCAGGCAGTGCCTACAC
GGACGCGCATCAAGCCAGATCGCTTGACATGTCACTTATCTCTCAAGCAT
CCCTTTGACACACCTACCCCTCTCGCCCGATTGATCTGGACATGTGCTCG
ACAGTGATGCCCGTGGACTTCTACGGCCGTCGCCTGACTCCCGACGACGA
GAGCGATCCTCTTCACGTCGCGTGTAGTTTCGAGATCTTCTTGGAGGACG
TATCATCTCCACTGGAAGAAGAGGACACGATGGTCGACCAGGACCGCCAT
CTTAGTTGTGGAACCACCCGGTGAAGTGGAAGAGCGGGAGTGACAGCATG
CCCAAGTGCGTTCCGTAGCGTTCAAAGGCTTGTTGTTGGTGTTGCTGGTT
ATGTGAGATAGATGGAAAAAAGATGGTCGTCATGATCCCCAATTAGTATC
TGCTTCCCACCACGGCCTCCTTTGGAACTCAACATTTCGTGTGGTTGGGG
TTGTCGAGAAGTGATCCCTGGCCACGTAGGACTCATGGTGGATGGAATCG
CAGAGAGAGGTTTGACTCCAACGGCGGACACAAAAGCTGTCGAAACGCTT
ACCGAAGCAGGCTTGGTAGATCTAAACACTTGTTGTTCAGTCAGGTGCGG
CGATTGATGCCGACGTGTCACAGTACCCCTCAGGTGTACTGCGTTCGTGC
AAGGTGCCTATCAGTAGGCTCGCTGTTTCGGAGAGACGAGTTGATCAGGC
ACAATGCACTAGTTATGGTTTTGTTGACACGCGGCGTGGACTGCATCAGA
AAGGTACCATGATCGCCTAGGTCTCAACAGTGCGTACAAGCCAGCTCGTT
TATGGCGGACGGGTCCGTGGGAGTCCGTTCACGCGGTCCTGCGCCATGTC
TCGACCTAATTTTGTCGTACATTTAACCGTCCTCCTCTATGTACTTGGAT
GGGGTCTCGCAACACAATAGGTGGAAACGCAACCAGAAGGAAAGGGGAGA
CTTCGCCGACACGGAAAAAGCGGATCCGGAGGGGGTGGGGCTGCGGATGA
AAGACGCGACCGGGTGGCGAGTAAGGCGATGCCTCGAAAGGGTCATGCGG
CCTACCCGGGGGGGCCAGGGGAAGGTATCTGCACCGACGCGTACCACACA
CGCAGCATCAGCTGTCCAAGTTACGGTAGATATTAATTTGTTGGCTTCCG
CTTTCGTTCCGTTTCTTTCCCCCTCTGATTTGCACCCTCCGGCATTGATG
CCACGTGGTGCATTTGGCGGGTAGTTGAGGCAGGAAGCTGTGCTTTGTTT
TTCGGTAGCGCGAGTTGACTTTGTCGGCTATTTTTTTCTTTTCTTTTCTT
TTCCCCTCTGATTTGTACCCTCCGGCACTGCTGCCAGGTGATGCATTTCG
AGGGTAGTTGAGGCAGGAAGCTGCGCTTTGCGTGTCGGTGGGGCGCATCA
CGCGCGGATTTCGTTCGCTTTTAGCGCCAGCAATCAAGCACAAGGCTGTG
TTAACTCTCCCACTCATTCGTGGAATCGGCTGTGGAATCGTTCAAATCTT
TCGTTGCTTCGGAGTATCATTCATTTGGGCTGAAAATGCTGCAATGGACG
TCCGTATTCCCCGGTATGACATTGTTACGGGATTTGAATTCGCTCGCGAA
GGAGGCGTCTTCCTTGTCGGCGGCTCAAGACCGCTTGACCAAGGTCCACG
CTGGCAACCGTCAGCGCCGGGAGCAGCACGACAAGGACAAGGCGCGGCGC
CAGCGGGCCCGTGTAGCTGACGGCCTCCGGGTTGAACGCTCAAGGGGCCC
TGCCGCTGCTATCCCGCCGGAGCCGGTGTCGTCGCCGCCGGCCGCTCCTT
CATACGCGACTGCTGCTGCGAGCCCGGCGACCCGCTCCAGTGGACACTCC
TTGGTGTTCAAGAACGGAGACGACCTTTTCGCCAAAGGTCGGCTGTCCGA
TACGGTCCAGGCAGCCCAATTCAACTTCCGCTCGGCCGACAGGGAACGCG
TCCTCCTTACGGCCACCCGCGTGGCCGTCGACGTGCCGGTCGGAGCGACC
GTCTCCGATGCTGTGCACGCCGCAAAACACAATGCGGAGCTTCACGGCAA
GGTGGAACTCCTGGTCTCCGCTCTTCGGGCGGCCCACGGCCGCGTGACCC
AACAGGTCCAGTGGCTAGGGTGCACCATACCATCTGCTGCAGCTCTGGCG
CCTGTTCCGTCCGCCACCACCTTCGACCTCCCGCCTCCGCCGAAACAGCA
CAAGGCCGGTGCTAAGAGTGGTGGGCGTGGGCCGGGTAAGGGGTCAGGGG
GCAGCAGTTCTGGCGGCGAAAACGACTCCAACGGTTGGTGTCGCTCCAAC
GATTCCGGAGCTGGCCGGTGCCACCAAGGAGGCCGCCCGCGGGACGCATC
TTCGGATCGGCGCCAAGCGGGAGGCCACCAGCGTGATGCTGTTCTGACCA
GCGCCAGCGTGGCCGTGCTCCTGCTGCTGCCGCCTCTTCTTCATCTTCGT
CCTCCGGGCAGAAGAAGAAGGTTCGGAGGGGCGCCCGCCCCGCCGATTCG
GTCAGCGGAACCAGCTTTGGCTCCGCTTCGGAAAACAGTCTTACTCGGAA
GGCTCCCGCTGGCAAACGGGATGACTCAGGTCTTTCCGCTTCCGGGCAAG
TGGTACCGTCGTTAA back to topCoding sequence (CDS) from alignment at Scaffold_578:129597..134361- >EsuBft1032_7a-0001 ID=EsuBft1032_7a-0001|Name=EsuBft1032_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1938bp|location=Sequence derived from alignment at Scaffold_578:129597..134361- (Ectocarpus subulatus male Bft15b) ATGGTGAAACACTTTGATGTACAATCGACCTCCCGCATCCCCGCTTCCCC TGGTGTCGACCTAACACCGAAGCGAGATGACGAGAAGGGAGGGAAGTGGC CGGTGAGGGAGGCCATCGGCAGCATGATGTGGGTGTCAACGTTCTCGCGT CCAGACGTCTCGTTCGCCGTGCGTGCGGTAACGCGCCACGTCCACGCCCG GCGAAGAGGGCTGGCCGTGTACTGGGATGTCATCCGGAAGATCCTCGGCT ACTTGAAGGAGAAGAGGGACCTCGGCATCACCTACCAACGGGGATCGTGG TTAGGGCTGGCCGTGTACGTACACGCCAGCTACGCCGACACGGAGGATAA GCGTTCGGTGTCAGGGTTGGCGACGACGGTTGGAGGTACCGTAGTCAGTC ATGGTAGCAAGACACAGAGCATCGTGTATTTGTCGTCGACGGAAGCCGAG TACATTGTTGCCGGGGAGGACGTCAAGGAGGCGTTGTTTGTGCGTGCTGT GCTTTCGTTTGTTACCCCAGAGACCAGTGGTAGCAGCATCCAGGTCCTTG AGGACAACCAGGGGGCCATAGCGTTGGTGCAGAACCCCCTCAGCTCAGGT CGCACGAAACACATCGACGTGAGATTTCATTTCATCCGCGGATTGTTTAG TTCGGGGGATATTTCGGTCAAGTCCGTTCCGACAACGGAGCAACACGCGG ACCTCCTAATCAAGGCCTTTAGCAGGGCGAATCTGCAGTACCACCGGCGC AAGTTGATGAATTTGCCGGAGTGGAAACGCAACCAGAAGGAAAGGGGAGA CTTCGCCGACACGGAAAAAGCGGATCCGGAGGGGGTGGGGCTGCGGATGA AAGACGCGACCGGGTGGCGAGTAAGGCGATGCCTCGAAAGGGTCATGCGG CCTACCCGGGGGGGCCAGGGGAAGGAGGCGTCTTCCTTGTCGGCGGCTCA AGACCGCTTGACCAAGGTCCACGCTGGCAACCGTCAGCGCCGGGAGCAGC ACGACAAGGACAAGGCGCGGCGCCAGCGGGCCCGTGTAGCTGACGGCCTC CGGGTTGAACGCTCAAGGGGCCCTGCCGCTGCTATCCCGCCGGAGCCGGT GTCGTCGCCGCCGGCCGCTCCTTCATACGCGACTGCTGCTGCGAGCCCGG CGACCCGCTCCAGTGGACACTCCTTGGTGTTCAAGAACGGAGACGACCTT TTCGCCAAAGGTCGGCTGTCCGATACGGTCCAGGCAGCCCAATTCAACTT CCGCTCGGCCGACAGGGAACGCGTCCTCCTTACGGCCACCCGCGTGGCCG TCGACGTGCCGGTCGGAGCGACCGTCTCCGATGCTGTGCACGCCGCAAAA CACAATGCGGAGCTTCACGGCAAGGTGGAACTCCTGGTCTCCGCTCTTCG GGCGGCCCACGGCCGCGTGACCCAACAGGTCCAGTGGCTAGGGTGCACCA TACCATCTGCTGCAGCTCTGGCGCCTGTTCCGTCCGCCACCACCTTCGAC CTCCCGCCTCCGCCGAAACAGCACAAGGCCGGTGCTAAGAGTGGTGGGCG TGGGCCGGGTAAGGGGTCAGGGGGCAGCAGTTCTGGCGGCGAAAACGACT CCAACGGTTGGTGTCGCTCCAACGATTCCGGAGCTGGCCGGTGCCACCAA GGAGGCCGCCCGCGGGACGCATCTTCGGATCGGCGCCAAGCGGGAGGCCA CCAGCGTGATGCTGTTCTGACCAGCGCCAGCGTGGCCGTGCTCCTGCTGC TGCCGCCTCTTCTTCATCTTCGTCCTCCGGGCAGAAGAAGAAGGTTCGGA GGGGCGCCCGCCCCGCCGATTCGGTCAGCGGAACCAGCTTTGGCTCCGCT TCGGAAAACAGTCTTACTCGGAAGGCTCCCGCTGGCAAACGGGATGACTC AGGTCTTTCCGCTTCCGGGCAAGTGGTACCGTCGTTAA back to top
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