Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1029_11 |
| Protein domains | IPR001878 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 214 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1029_11a-0001 ID=EsuBft1029_11a-0001|Name=EsuBft1029_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2140bp|location=Sequence derived from alignment at Scaffold_70:418867..421006+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGGGCCGCAGAACCGGAGGGACCACTCCGGACGGCTCGCAGGCAGG
AGACACAAATAGCAGCGAGCAGATCGACAGCATGCGGTCTGAGATCAGTT
CGCTGACACAGCAAATGGGCCAGCTGGTGCAGCTGGTCGGAGGACTTGCT
GCACGTATAGAGGAGAAGTCCGGCGGTGCCACGGAGGGCGCCGCTGAAAG
CGGCGGCGCCGTGGAGAGCGTCGCCACAAGCACTGCAGGTCATTTTGGGA
CCGTGCAGTACGACGGGAGCGCGCAGGCAGCGGACCTGCGAAGAGAGTCT
GGTCCTTCGGGACGACACAGCGGCGAAGTAGGGGGTTCAGACCCCCAAGA
GGTGAGAGTAGCCGCTGCTCACAATCAAGCTTGTTTCAGCAGCGCCATGG
GAAGTGGTGCTGCTGTCTTTGGTAGTGCGAGCGTGGGATACCAAAGCGTG
AAGTACACAGCGCCCACGTTCAGCGGAGACGCCAAGAGCTTTTCTTCGTG
GCTAGAGGATTTTTTTATGGCAGCGAACACAGCAAACCTTCTTGAGCTTT
TCGAGGAGGGGGGGGGGGAGATCCCCGTAAACAGTGGGCAGAGCAAAGTC
CAACTGTCCAGGTTTTACCCGCACGACAAAGTAGAGCTCGCTTTCCACGC
GTGGAATTTCCTCCGTGGAGCTCTCAAGGACGAGAAAGACAGGACAATAA
TGAAGCGAGCTGAGTCGCCCCTGGGGGCGCTCCGTGAGCTGAAGGGGTTG
TACGACCCAGAATCGTCCATGCAGCCTGCGGATGAGTTAAAATCCCTGAC
ATCCAAGAAGATCCCGATGGCAGAGAATCCGCAACATGCTCTCAACAGTA
TGCTCGCCACCGCAGAGTCCCTTTCGAAACGGGGGCTTGATGTTAACGAA
ACCTTCGTTTTGCACCTCTTCTTGGATGCCCTCTCCAACGAGTACGCTAT
GACCAAGCACGCCCTCAGACACAAGGAGAGGTTGACAAGGAGTGACGTCC
TGAAGGAGGTCACCATCGAATATCGATCGATCATGGAGAAGGTGAAGGCG
GGGAAAGGCAAGGGCGCGCGCGGCGCCGAGCAGGCCTACCTCGCCGATGG
AGGCGGCCGCCGTGGGCGGTCGTCGTGGCGTGGGGGCGGCCGCCGAGGGC
GGTCGTCCTGGCGTGGTCGTGGCGGTGGCCGCAGCGGCGGCCGCGGGGGC
GGCGACAGCAGCGGAAAAGGCGGTGGCGGCGTCGAGGAGAGCAAGGGGAG
TGGCTCTGGTGGGGCAGATGGCGGCGGTACCGGGGACAAGAAGTTCCCGG
GCCGGTGCTTCACGTGTGGCCGTTTCGGACACACGCAGCAGGACTGCACC
ACCAAGGAGAGCGACTACCTCCCGCAGTGCTCACACTGCGCAGGATGGGG
TCACAGCAAGGACAAGTGCGCGACGGAGGAGGCCGTCCTGGCGCAGATCG
TCCATGCCGACAGCGACGCCGACTCCGTCGACAACCAGGCCTTCTGCGCG
GCGCCGGGCCTGCCAGGCGAGTGTGGTGCTGTTGACCTAGGTCTAGTGGG
GGTAACGGAACTAGGCCAGGATGTCATGGTGTACGTGGCTGATACAGCAG
CCACGTGCTCCATGTTCCGATGCGCAAACGCGTTCGTGAACTAGCGCGAG
TATAGTGGTTGGGTCAAGGGGCTCGGAGGCAACAAGGCCCCCGTTCCTCT
CCTAGGGTACGGAGACGTGACCGTAGTCTTTCTGACCGAAGGCGGTAGGG
TACCAGTGCTAATCCTGAACGCCGCTCATGTGCCCGAGTCCCCCCACAAC
CTTCTCTCACTGTCGGCGTTGGCCGAGGAAGGCCACACGTATTCCGGCCA
GAAGGGGGGGCTGACTCTCACTACGAGGACCGGGGGGAAGGTGTGGTTCC
CCCGGACGGGTAAGCTGCTAACTCAAGAAGGCTATCAAATCGAGCCGAAG
GTAGACATCGCCTGTGCCGCAACAATTGTTCCTGGCGATGCGAAAGCAGC
CACCCCCACTGACCTCAACTAATATCACAATTCGCACGGCCACACGCACG
AGGAACTGCTCCAGAAAACGGCGAAACAGCAAGGAGTGCAGCTGACGGGA
GGACCGCTGCTACCATGCCTCGGCTGTTCGATGTCCAAGC back to topprotein sequence of EsuBft1029_11a-0001 >EsuBft1029_11 ID=EsuBft1029_11|Name=EsuBft1029_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=547bp
MAGRRTGGTTPDGSQAGDTNSSEQIDSMRSEISSLTQQMGQLVQLVGGLA
ARIEEKSGGATEGAAESGGAVESVATSTAGHFGTVQYDGSAQAADLRRES
GPSGRHSGEVGGSDPQEVRVAAAHNQACFSSAMGSGAAVFGSASVGYQSV
KYTAPTFSGDAKSFSSWLEDFFMAANTANLLELFEEGGGEIPVNSGQSKV
QLSRFYPHDKVELAFHAWNFLRGALKDEKDRTIMKRAESPLGALRELKGL
YDPESSMQPADELKSLTSKKIPMAENPQHALNSMLATAESLSKRGLDVNE
TFVLHLFLDALSNEYAMTKHALRHKERLTRSDVLKEVTIEYRSIMEKVKA
GKGKGARGAEQAYLADGGGRRGRSSWRGGGRRGRSSWRGRGGGRSGGRGG
GDSSGKGGGGVEESKGSGSGGADGGGTGDKKFPGRCFTCGRFGHTQQDCT
TKESDYLPQCSHCAGWGHSKDKCATEEAVLAQIVHADSDADSVDNQAFCA
APGLPGECGAVDLGLVGVTELGQDVMVYVADTAATCSMFRCANAFVN back to topmRNA from alignment at Scaffold_70:418867..421006+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1029_11a-0001 ID=EsuBft1029_11a-0001|Name=EsuBft1029_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2140bp|location=Sequence derived from alignment at Scaffold_70:418867..421006+ (Ectocarpus subulatus male Bft15b)
ATGGCGGGCCGCAGAACCGGAGGGACCACTCCGGACGGCTCGCAGGCAGG
AGACACAAATAGCAGCGAGCAGATCGACAGCATGCGGTCTGAGATCAGTT
CGCTGACACAGCAAATGGGCCAGCTGGTGCAGCTGGTCGGAGGACTTGCT
GCACGTATAGAGGAGAAGTCCGGCGGTGCCACGGAGGGCGCCGCTGAAAG
CGGCGGCGCCGTGGAGAGCGTCGCCACAAGCACTGCAGGTCATTTTGGGA
CCGTGCAGTACGACGGGAGCGCGCAGGCAGCGGACCTGCGAAGAGAGTCT
GGTCCTTCGGGACGACACAGCGGCGAAGTAGGGGGTTCAGACCCCCAAGA
GGTGAGAGTAGCCGCTGCTCACAATCAAGCTTGTTTCAGCAGCGCCATGG
GAAGTGGTGCTGCTGTCTTTGGTAGTGCGAGCGTGGGATACCAAAGCGTG
AAGTACACAGCGCCCACGTTCAGCGGAGACGCCAAGAGCTTTTCTTCGTG
GCTAGAGGATTTTTTTATGGCAGCGAACACAGCAAACCTTCTTGAGCTTT
TCGAGGAGGGGGGGGGGGAGATCCCCGTAAACAGTGGGCAGAGCAAAGTC
CAACTGTCCAGGTTTTACCCGCACGACAAAGTAGAGCTCGCTTTCCACGC
GTGGAATTTCCTCCGTGGAGCTCTCAAGGACGAGAAAGACAGGACAATAA
TGAAGCGAGCTGAGTCGCCCCTGGGGGCGCTCCGTGAGCTGAAGGGGTTG
TACGACCCAGAATCGTCCATGCAGCCTGCGGATGAGTTAAAATCCCTGAC
ATCCAAGAAGATCCCGATGGCAGAGAATCCGCAACATGCTCTCAACAGTA
TGCTCGCCACCGCAGAGTCCCTTTCGAAACGGGGGCTTGATGTTAACGAA
ACCTTCGTTTTGCACCTCTTCTTGGATGCCCTCTCCAACGAGTACGCTAT
GACCAAGCACGCCCTCAGACACAAGGAGAGGTTGACAAGGAGTGACGTCC
TGAAGGAGGTCACCATCGAATATCGATCGATCATGGAGAAGGTGAAGGCG
GGGAAAGGCAAGGGCGCGCGCGGCGCCGAGCAGGCCTACCTCGCCGATGG
AGGCGGCCGCCGTGGGCGGTCGTCGTGGCGTGGGGGCGGCCGCCGAGGGC
GGTCGTCCTGGCGTGGTCGTGGCGGTGGCCGCAGCGGCGGCCGCGGGGGC
GGCGACAGCAGCGGAAAAGGCGGTGGCGGCGTCGAGGAGAGCAAGGGGAG
TGGCTCTGGTGGGGCAGATGGCGGCGGTACCGGGGACAAGAAGTTCCCGG
GCCGGTGCTTCACGTGTGGCCGTTTCGGACACACGCAGCAGGACTGCACC
ACCAAGGAGAGCGACTACCTCCCGCAGTGCTCACACTGCGCAGGATGGGG
TCACAGCAAGGACAAGTGCGCGACGGAGGAGGCCGTCCTGGCGCAGATCG
TCCATGCCGACAGCGACGCCGACTCCGTCGACAACCAGGCCTTCTGCGCG
GCGCCGGGCCTGCCAGGCGAGTGTGGTGCTGTTGACCTAGGTCTAGTGGG
GGTAACGGAACTAGGCCAGGATGTCATGGTGTACGTGGCTGATACAGCAG
CCACGTGCTCCATGTTCCGATGCGCAAACGCGTTCGTGAACTAGCGCGAG
TATAGTGGTTGGGTCAAGGGGCTCGGAGGCAACAAGGCCCCCGTTCCTCT
CCTAGGGTACGGAGACGTGACCGTAGTCTTTCTGACCGAAGGCGGTAGGG
TACCAGTGCTAATCCTGAACGCCGCTCATGTGCCCGAGTCCCCCCACAAC
CTTCTCTCACTGTCGGCGTTGGCCGAGGAAGGCCACACGTATTCCGGCCA
GAAGGGGGGGCTGACTCTCACTACGAGGACCGGGGGGAAGGTGTGGTTCC
CCCGGACGGGTAAGCTGCTAACTCAAGAAGGCTATCAAATCGAGCCGAAG
GTAGACATCGCCTGTGCCGCAACAATTGTTCCTGGCGATGCGAAAGCAGC
CACCCCCACTGACCTCAACTAATATCACAATTCGCACGGCCACACGCACG
AGGAACTGCTCCAGAAAACGGCGAAACAGCAAGGAGTGCAGCTGACGGGA
GGACCGCTGCTACCATGCCTCGGCTGTTCGATGTCCAAGC back to topCoding sequence (CDS) from alignment at Scaffold_70:418867..421006+ >EsuBft1029_11a-0001 ID=EsuBft1029_11a-0001|Name=EsuBft1029_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1644bp|location=Sequence derived from alignment at Scaffold_70:418867..421006+ (Ectocarpus subulatus male Bft15b)
ATGGCGGGCCGCAGAACCGGAGGGACCACTCCGGACGGCTCGCAGGCAGG
AGACACAAATAGCAGCGAGCAGATCGACAGCATGCGGTCTGAGATCAGTT
CGCTGACACAGCAAATGGGCCAGCTGGTGCAGCTGGTCGGAGGACTTGCT
GCACGTATAGAGGAGAAGTCCGGCGGTGCCACGGAGGGCGCCGCTGAAAG
CGGCGGCGCCGTGGAGAGCGTCGCCACAAGCACTGCAGGTCATTTTGGGA
CCGTGCAGTACGACGGGAGCGCGCAGGCAGCGGACCTGCGAAGAGAGTCT
GGTCCTTCGGGACGACACAGCGGCGAAGTAGGGGGTTCAGACCCCCAAGA
GGTGAGAGTAGCCGCTGCTCACAATCAAGCTTGTTTCAGCAGCGCCATGG
GAAGTGGTGCTGCTGTCTTTGGTAGTGCGAGCGTGGGATACCAAAGCGTG
AAGTACACAGCGCCCACGTTCAGCGGAGACGCCAAGAGCTTTTCTTCGTG
GCTAGAGGATTTTTTTATGGCAGCGAACACAGCAAACCTTCTTGAGCTTT
TCGAGGAGGGGGGGGGGGAGATCCCCGTAAACAGTGGGCAGAGCAAAGTC
CAACTGTCCAGGTTTTACCCGCACGACAAAGTAGAGCTCGCTTTCCACGC
GTGGAATTTCCTCCGTGGAGCTCTCAAGGACGAGAAAGACAGGACAATAA
TGAAGCGAGCTGAGTCGCCCCTGGGGGCGCTCCGTGAGCTGAAGGGGTTG
TACGACCCAGAATCGTCCATGCAGCCTGCGGATGAGTTAAAATCCCTGAC
ATCCAAGAAGATCCCGATGGCAGAGAATCCGCAACATGCTCTCAACAGTA
TGCTCGCCACCGCAGAGTCCCTTTCGAAACGGGGGCTTGATGTTAACGAA
ACCTTCGTTTTGCACCTCTTCTTGGATGCCCTCTCCAACGAGTACGCTAT
GACCAAGCACGCCCTCAGACACAAGGAGAGGTTGACAAGGAGTGACGTCC
TGAAGGAGGTCACCATCGAATATCGATCGATCATGGAGAAGGTGAAGGCG
GGGAAAGGCAAGGGCGCGCGCGGCGCCGAGCAGGCCTACCTCGCCGATGG
AGGCGGCCGCCGTGGGCGGTCGTCGTGGCGTGGGGGCGGCCGCCGAGGGC
GGTCGTCCTGGCGTGGTCGTGGCGGTGGCCGCAGCGGCGGCCGCGGGGGC
GGCGACAGCAGCGGAAAAGGCGGTGGCGGCGTCGAGGAGAGCAAGGGGAG
TGGCTCTGGTGGGGCAGATGGCGGCGGTACCGGGGACAAGAAGTTCCCGG
GCCGGTGCTTCACGTGTGGCCGTTTCGGACACACGCAGCAGGACTGCACC
ACCAAGGAGAGCGACTACCTCCCGCAGTGCTCACACTGCGCAGGATGGGG
TCACAGCAAGGACAAGTGCGCGACGGAGGAGGCCGTCCTGGCGCAGATCG
TCCATGCCGACAGCGACGCCGACTCCGTCGACAACCAGGCCTTCTGCGCG
GCGCCGGGCCTGCCAGGCGAGTGTGGTGCTGTTGACCTAGGTCTAGTGGG
GGTAACGGAACTAGGCCAGGATGTCATGGTGTACGTGGCTGATACAGCAG
CCACGTGCTCCATGTTCCGATGCGCAAACGCGTTCGTGAACTAG back to top
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