EsuBft1026_11a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1026_11a-0001
Unique NameEsuBft1026_11a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_385contigScaffold_385:277642..281744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FNZ2
ProteomeIdEsuBft1026_11
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsPTHR22895
Protein domainsTMhelix
Protein domainsIPR011989
Protein domainsIPR000225
Protein domainsIPR016024
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsTRANSMEMBRANE
Ownerapollo_admin@sb-roscoff.fr
Noteprotein aardvark os:dictyostelium discoideum gn:aara pe:2 sv:1 [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length888
Hectar predicted targeting categoryother localisation
Evalue1.39e-46
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameANKRD44
KEGG rclassRC00453
KEGG koko:K01597,ko:K15503,ko:K20129
KEGG ReactionR01121
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00095
GOsGO:0000902,GO:0000904,GO:0002064,GO:0003382,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0006810,GO:0006897,GO:0007275,GO:0008150,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0016043,GO:0016192,GO:0030154,GO:0030855,GO:0032501,GO:0032502,GO:0032989,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048468,GO:0048598,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0060429,GO:0071840,GO:0098657
EC4.1.1.33
Descriptionprotein kinase activity
COG categoryKLT
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03400,ko04131
Cross References
External references for this mRNA
DatabaseAccession
GO0031227
GO0002244
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1026_11aEsuBft1026_11aEctocarpus subulatus male Bft15bgeneScaffold_385 277642..281744 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1026_11a-0001EsuBft1026_11Ectocarpus subulatus male Bft15bpolypeptideScaffold_385 277642..281744 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1026_11a-0001-exonagat-exon-96579Ectocarpus subulatus male Bft15bexonScaffold_385 277642..277783 +
EsuBft1026_11a-0001-exonEsuBft1026_11a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_385 278065..278160 +
EsuBft1026_11a-0001-exonagat-exon-96581Ectocarpus subulatus male Bft15bexonScaffold_385 278874..278965 +
EsuBft1026_11a-0001-exonagat-exon-96582Ectocarpus subulatus male Bft15bexonScaffold_385 280017..280076 +
EsuBft1026_11a-0001-exonagat-exon-96578Ectocarpus subulatus male Bft15bexonScaffold_385 280319..280495 +
EsuBft1026_11a-0001-exonagat-exon-96580Ectocarpus subulatus male Bft15bexonScaffold_385 280997..281136 +
EsuBft1026_11a-0001-exonagat-exon-96577Ectocarpus subulatus male Bft15bexonScaffold_385 281564..281744 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1026_11a-0001-cdsEsuBft1026_11a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_385 277642..277783 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1026_11a-0001 ID=EsuBft1026_11a-0001|Name=EsuBft1026_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=888bp|location=Sequence derived from alignment at Scaffold_385:277642..281744+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCATAAGGGATGGCGGCATCTTGGGCGCTCGGCGCCGCCCTGCATC
GGCGGTTTCTTCGGGAAGCGGTAGCAGCGACGATGAAGAGGACGGAAGTG
GCAACGGAGCGGAAACGATGGTTGGCAACGCCGCGGAGACAGGTCCGCGG
GGCGTCGCGGAGCTCCTGCGGCGACATCCGAAGAGGCCCGAGATACAGCG
CCGAGGGCTTCGAGCCCTGAGAGACTTAGCCTACAAGGGCGACGAGGAAA
GGGTGGCGGTGGCAGCAGCTGGGGGCGTTGCTGCCGCGGTCCACGCCATG
AACCGCTTCCCGGCAGATTCCAGAGTACAGGTCGGCGGAGTGAAGACCCT
TGCACATCTGGCCTTCGGAAACGACGTCAACAGAATCGAGGTGGGCTCTT
CCGGGGGCACGGCCGCGATCCTTCGCGCCATGGCCGCCAACCCAGCCGAC
CCGGAGTTGCAAGGGGAGGGGTGCACGGCATTTACGAACCTTTCCCACAA
CTGCGACCGGAATAGGAAGCTCGTTGTCGAAGGTGGAGGTCTCATCCTCA
TCCTCAACGCCATGCAGGCTTTCCCTGGACATCCCAAGCTGCAGCGCCAA
GCATGCTGGGCCCTCCTGACGCTCGCAGCGAACGACGAAATATCGAGGGT
GATCGCAAGGGAGGGCGGGGTGGGTGCCATCATCGCAGCGATGATCAACA
ACGCCGATGATACCTCCGTGCAACATTTTGGCTGCTGGGCTCTGGCCAAC
GTGGGCTGGGGGCAAGCCGACGTGCAGAGGTTTGCTAGGGAAGAGGGCGC
GATAGAAGCCATCCAGGTAGCGAAATATTTAGCGTTGGTAGTATTGGTGC
CATTGTCGTCGTGGATGATATTGTTGATGTATATATGA
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protein sequence of EsuBft1026_11a-0001

>EsuBft1026_11 ID=EsuBft1026_11|Name=EsuBft1026_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=295bp
MGIRDGGILGARRRPASAVSSGSGSSDDEEDGSGNGAETMVGNAAETGPR
GVAELLRRHPKRPEIQRRGLRALRDLAYKGDEERVAVAAAGGVAAAVHAM
NRFPADSRVQVGGVKTLAHLAFGNDVNRIEVGSSGGTAAILRAMAANPAD
PELQGEGCTAFTNLSHNCDRNRKLVVEGGGLILILNAMQAFPGHPKLQRQ
ACWALLTLAANDEISRVIAREGGVGAIIAAMINNADDTSVQHFGCWALAN
VGWGQADVQRFAREEGAIEAIQVAKYLALVVLVPLSSWMILLMYI
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mRNA from alignment at Scaffold_385:277642..281744+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1026_11a-0001 ID=EsuBft1026_11a-0001|Name=EsuBft1026_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4103bp|location=Sequence derived from alignment at Scaffold_385:277642..281744+ (Ectocarpus subulatus male Bft15b)
ATGGGCATAAGGGATGGCGGCATCTTGGGCGCTCGGCGCCGCCCTGCATC
GGCGGTTTCTTCGGGAAGCGGTAGCAGCGACGATGAAGAGGACGGAAGTG
GCAACGGAGCGGAAACGATGGTTGGCAACGCCGCGGAGACAGGTAGCTGG
CACGTGTGCAAGGGAGGTTGCGTACTTGAAGTAAGTGTGTCACCCATCGA
AATCCACTCATTGAATTCTTGCGTTGTGGAATCGTTGCTATTGTTTCGAT
TTCTCACAGAAACCGCCTCTAGCCTAAATATCTGGCTAATGCATCGGTCA
TGTCTTCGATGACGGCTACAACCGTGGCCGTTGCGACCTAGTACACACAA
AAATAATAGATTTCAAATAATGCCGGCAATCACGCAGTAATTTTCTGTCA
TTTCGCGAATTGCTATTGAACAGGTCCGCGGGGCGTCGCGGAGCTCCTGC
GGCGACATCCGAAGAGGCCCGAGATACAGCGCCGAGGGCTTCGAGCCCTG
AGAGACTTAGCCTACAAGGGTGAGAAGGTTGTTATTTTCATGTCTATCAT
TCTTATTATCTCCCCTCCCTCCGGCAATGTCTATCTTTGTTGTGGCCGCG
TCCACTCTGCGCATCGAAGGTAGCTTCGATTCGGGGCACTCAAACAAAAT
CCCTCTTTCTCTCGCGTAGACCCGGTCATGCTACCAAGGTCGTGTATGTG
CAGCTGAATAGTTTGAATCTCACTCTTAGAACGTTTCACAGCAACTCGGG
AGCGTTCATCATGGGTATTTGAGCCGTACCGCCGTCTATTGCTCATGTCC
ATACTGAGGTACAGTCGTGGCTCCCGTACAAGAGCGTCGTGTGACAGGCC
CTCGACTCTCATACATATATCGGAGCCCCCGCTGTACCCCAACTAACTAT
TGTACAGCGGATCGAGTCTGTGACAACCGACTTCGACCCTCTAATGGTGG
AGCCCGCTGATATACGGTACCCTCTGGCACGGAGCCACGACTGTCAGTTT
GTCCCTGTTCCACAACATGGGCACATTTCTCTCTTTCGATCCTCTAATGT
CGGAGCTCGCTGATAGACGGTACCCTCTGGTATCGGAGCCACGACTGTCT
GTTTGTCCCTGTTCCACGATACGGGCATATTTCTGTCGTTGAAATAACAC
GATCCGTTTGCTTAGCTAACACGACACCAGCAACCCAACTCGCCAACATT
TTAGTGTTGCGATTTTATCATGTCTCCAAAAGGCGACGAGGAAAGGGTGG
CGGTGGCAGCAGCTGGGGGCGTTGCTGCCGCGGTCCACGCCATGAACCGC
TTCCCGGCAGATTCCAGAGTACAGGTGAACGATGACGAGGGTCCAAGGCC
GAAGAAAAAAAGCGTGCGTTTTCGTCCCGCCGACTCGAAAAATCATCATT
TGTCCGAACATTCGACCATCAGCAGATTCCCAGTAGCCCCTGACCAACGA
CTCAGAACGACCGTTGAATAGTTTTCACTGAGAGCAGCACATGTTGCGAC
CGACACGAGTTGTGTGTTCAAGAACGCACCCTTGAAAACCTGTTTCGGAT
GGTTGTCTCTACAAGCTGCAACTGCATGTCGGTGTCGCGTTCTCCCCGTG
CAATGATTTGGAATGCCAAGGAGGGTCGAAAAAAATTGCAGTAGCGGCAT
ACCATATCCGCAAATAGGACAGACACGCAGCGCCTTGTTACCGCTTGTGC
TCGTCGCCACTAAGCTCAATCTCCTGAACTATGGGATAGTCGTAGCTGAT
GCTGACGATCCGCCGTCCAGGGGTTTACGGAACGTGGGGTGAGCACGGCT
GTGATCAATCTTGCGTTCCGGCAAAATTCGGAGCAGATTACGGGCCGTTT
CTGGAGACTGCTGCGACCTTCGGTATTTTAGCTCGATCAGCAAACTTGTT
TCTGCCTCCACACACAGCGCCTCTTCATTGCGTCTCCTACCATGATAACA
GTATTCAACGTAGACTAGCAGCGGCGGGAAGGTTGCTATCTTTTTGTATA
TTGGGTTAAGCATGAAAATAGAGCCAGCTTCAAACCAGCCTTAATTGACA
TCAAACCCTCACACTCGGTTTGAACTCGGAAAAAAAACTCGGGAAATACT
TTGTCGTGGTTTCAAACCCAAGCTGTACACGGGATACAGACAAGCGAGGA
GAGGAGTATTGATGGTGCGCATAGGGCAGGCCAAAGAGCTGAGGAGTCCA
TTCCGCAAGGAATACGATGCCGATGCAAGTGCGCAATCAAATTTATGCAC
ACAGGAGTCCTGTTTTCACGGCTGGTGTCCGGTGCGCTATTTGCTGCGGT
GCCGGACGGTTGAGTGTGATTGGACGAGAAGGTCCTGTCTCTAACCGAAT
TTGTTCAATGTGTATTTGTGTGCAGGTCGGCGGAGTGAAGACCCTTGCAC
ATCTGGCCTTCGGAAACGACGTCAACAGAATCGAGGTGCGTGCTACAGCT
TATGCTGCGAACCAACAGCGCTTAGATTCACTCCAGAGTAGTATGTGGCC
TATTGTGCACATTGCAACAACTTCTTGTGGACTGAGAGCCCACCCTTGGT
GCCGTGGATGGGACCCATGACTTGGCGTGGCCTGGTCCACCACGCGCCGT
GGTGTGAACGTCTCCGTCGCAATGTGGCTGAGCTTGTCCTCACTTCACCC
TCGTGGTCGTGTGCGCAATGCCTTCAGGTGGGCTCTTCCGGGGGCACGGC
CGCGATCCTTCGCGCCATGGCCGCCAACCCAGCCGACCCGGAGTTGCAAG
GGGAGGGGTGCACGGCATTTACGAACCTTTCCCACAACTGCGACCGGAAT
AGGAAGCTCGTTGTCGAAGGTGGAGGTCTCATCCTCATCCTCAACGCCAT
GCAGGTGAGAAGAACACCAACGCCTAACGGCAATCCCTCTACCATTTATA
ACTGCCAATCATGTGCCCTGTCAACATGCTGTCTGTTCCGGGCTTCCGTA
TCGCGATTCATGAGGCGTTATTGTTGGTTGTGGTGGCGGTGGATTTTTCT
TGCGGTATTTATATTTTTTGTCTCAAACCTGCATCCTCGCCCACACTCTT
CGCAAACGTGGTCACAAACTATCAACACGCAAACCATAAAACCACCCGAA
GCATTTTCCACCAGACGCGAATACGTTATGAATCCCTACATGGCACGACC
AAATCTAGACGAAAGGCACAAAGAGTCGGGGAATGAGTGGGACAAAAGCA
AAGCTTGGAGCGCCACCACGAAGTCAAGTACGCGTGAACGCGAGGAGAGG
TGATCATCTCTTTTTGCCGCCGACCAGGCCAGCTTCGTGCGTGCCATGAG
GGTATGAAAGGATTGTCACACGAAAGTGCGCGCCGTTCCTGCCAAAATCG
AGCAGGCTTTCCCTGGACATCCCAAGCTGCAGCGCCAAGCATGCTGGGCC
CTCCTGACGCTCGCAGCGAACGACGAAATATCGAGGGTGATCGCAAGGGA
GGGCGGGGTGGGTGCCATCATCGCAGCGATGATCAACAACGCCGAGTGAG
ATGCTTCGTGGCAGTCCTTACAAGCGTTGGAATGGAACTTCCGGCCGCCG
TATGCGGCCATAGTTGCTGAGTGGAACGTGAAATAGGCCCGTACCCATGA
AAGCAAATATAAGACCTGTACACGAGTTCCACTTCGTCTCCGCGTTGTTG
ATTGGTGCAATGTGAAATAACAATCTGTCGTCTTTTCTTCATCCAGAGGA
AAGCTACGGACGATTGCATTGGATTTACCTTTGCAACGTTAGGTCGTGCA
CCACACGATGGAAAGGCACCCACACAACGCCCTGGACGATGTTCGAGGGA
CGATCCCCCGAGCTCATGATGCCCCTATTATAGAGACCATCGATTCCCTT
TTCGTGCGAGTTTCACTGGTATGCCTTACTCCCTCCCGACCCCCCACCCT
CTGCCCTTCCGCGCGTGTGAAGTGATACCTCCGTGCAACATTTTGGCTGC
TGGGCTCTGGCCAACGTGGGCTGGGGGCAAGCCGACGTGCAGAGGTTTGC
TAGGGAAGAGGGCGCGATAGAAGCCATCCAGGTAGCGAAATATTTAGCGT
TGGTAGTATTGGTGCCATTGTCGTCGTGGATGATATTGTTGATGTATATA
TGA
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Coding sequence (CDS) from alignment at Scaffold_385:277642..281744+

>EsuBft1026_11a-0001 ID=EsuBft1026_11a-0001|Name=EsuBft1026_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=888bp|location=Sequence derived from alignment at Scaffold_385:277642..281744+ (Ectocarpus subulatus male Bft15b)
ATGGGCATAAGGGATGGCGGCATCTTGGGCGCTCGGCGCCGCCCTGCATC
GGCGGTTTCTTCGGGAAGCGGTAGCAGCGACGATGAAGAGGACGGAAGTG
GCAACGGAGCGGAAACGATGGTTGGCAACGCCGCGGAGACAGGTCCGCGG
GGCGTCGCGGAGCTCCTGCGGCGACATCCGAAGAGGCCCGAGATACAGCG
CCGAGGGCTTCGAGCCCTGAGAGACTTAGCCTACAAGGGCGACGAGGAAA
GGGTGGCGGTGGCAGCAGCTGGGGGCGTTGCTGCCGCGGTCCACGCCATG
AACCGCTTCCCGGCAGATTCCAGAGTACAGGTCGGCGGAGTGAAGACCCT
TGCACATCTGGCCTTCGGAAACGACGTCAACAGAATCGAGGTGGGCTCTT
CCGGGGGCACGGCCGCGATCCTTCGCGCCATGGCCGCCAACCCAGCCGAC
CCGGAGTTGCAAGGGGAGGGGTGCACGGCATTTACGAACCTTTCCCACAA
CTGCGACCGGAATAGGAAGCTCGTTGTCGAAGGTGGAGGTCTCATCCTCA
TCCTCAACGCCATGCAGGCTTTCCCTGGACATCCCAAGCTGCAGCGCCAA
GCATGCTGGGCCCTCCTGACGCTCGCAGCGAACGACGAAATATCGAGGGT
GATCGCAAGGGAGGGCGGGGTGGGTGCCATCATCGCAGCGATGATCAACA
ACGCCGATGATACCTCCGTGCAACATTTTGGCTGCTGGGCTCTGGCCAAC
GTGGGCTGGGGGCAAGCCGACGTGCAGAGGTTTGCTAGGGAAGAGGGCGC
GATAGAAGCCATCCAGGTAGCGAAATATTTAGCGTTGGTAGTATTGGTGC
CATTGTCGTCGTGGATGATATTGTTGATGTATATATGA
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