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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FN85 |
ProteomeId | EsuBft1025_6 |
Protein domains | SSF55681 |
Protein domains | IPR004529 |
Protein domains | G3DSA |
Protein domains | IPR022911 |
Protein domains | IPR002319 |
Protein domains | IPR004188 |
Protein domains | IPR010978 |
Protein domains | IPR006195 |
Protein domains | PTHR11538 |
Protein domains | Coil |
Owner | apollo_admin@sb-roscoff.fr |
Note | phenylalanine--trna ligase alpha subunit os:nostoc punctiforme (strain atcc 29133 pcc 73102) gn [Automatic annotation] |
Nb exon | 7 |
Max annot lvl | 2759|Eukaryota |
Length | 1121 |
Hectar predicted targeting category | other localisation |
Evalue | 3.64e-238 |
EggNOG OGs | COG0016@1|root,KOG2783@2759|Eukaryota |
Ec32 ortholog description | phenylalanyl-tRNA synthetase |
Ec32 ortholog | Ec-15_003330.1 |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
KEGG rclass | RC00055,RC00523 |
KEGG ko | ko:K01889 |
KEGG Reaction | R03660 |
KEGG Pathway | ko00970,map00970 |
KEGG Module | M00359,M00360 |
EC | 6.1.1.20 |
Description | phenylalanyl-tRNA aminoacylation |
COG category | J |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 |
Cross References
External references for this mRNA
Database | Accession |
GO | 0005524 |
GO | 0000049 |
GO | 0005737 |
GO | 0006432 |
GO | 0004826 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1025_6a-0001 ID=EsuBft1025_6a-0001|Name=EsuBft1025_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1121bp|location=Sequence derived from alignment at Scaffold_38:83901..90733+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCGTCTCGAGCGAGCTGCTGATGGTACAGGAGGAGGCAGAGAAGGAGATG AAGGCGGCCGCAACTCTGCAGGAGCTAGAAGACCTTCGACGCAAGTACAT GACCAAAAAGGGACCAGTGCAGAGGGTCATGGGACAAATGAGACTCCTCA GCCCGGAAGACAAGCCGAAGCTGGGTAAGGTTAGCAATGTAGTGAAGGCG TCCTTGGAGGAAACGCTCAAGTCTTCCAAGGCCGCGCTCGAGAACGCTGC CGTCGAGGCGGAGATGGAGAAGGACAAGGTGGACCTCACGCTGCCCGGGA TCCAAAGCGGGAGGCACGCCCCGCACGGGCACCGGCACCCGCTGTCCATC ATGACGGAGCTGGCCACGGACGTGTTCATAGACATGGGGTACTCCCTTGT CGACGGCGTGGAGGATGCTCCCGAGATCGAAAACGACTACTACTGCTTCG AGGCGCTGAACTGCCCCAAGGACCACCCGGCGAGAGATATGCAGGACACG TTCTACATCGAGCACGAGGAGGGGGAGGAGCCCTTGCTCTTGCGCACTCA CACGTCGTCGGTGCAGATCCGGGCCCTGGAGAGGCTGAAGCCGCCGCTCG CCATCGTGGCGCCCGGCCGGGTGTTCCGCCGAGACACGCCGGACGCCACC CACAACCCCGAGTTTCACCAGATCGAGATTCTCAACGTCCAAAAGTCGGG GGAGCTGCACCTGGGCCACCTCAAGGGTACGGTGGACCACTTCCTCAAGA AGATGTTCGGCCCCGACGTTAAGACGAGGTACCGGGGGAGCTACTTCCCC TTCACGGAGCCCAGCATGGAGGTGGACATCTGGTTCAAGGGGAAGATCGA CGGAAAAACAACCAGTTTCGCATCCCCCCCCCGCGCGCGCCCCTTGCAAA TCAACAGGTGGATGGAAGTGTTAGGGTGCGGCATGGTGGACCCTCGCGTG CTTGAGATGGCCGGAGTTGACCCCGAGGAGTACTCGGGCTTCGCGGCCGG GTTCGGGGTGGAGCGTTTCGCCATGGTCTTGTTCGGGGTGCAGGACCTTC GCAACTTCTGGAGTAGCGACATGAGGTTCCTGGAGCAGTTCCCAGCGGAC ATTCAGGCAAGCGGCACATAA back to topprotein sequence of EsuBft1025_6a-0001 >EsuBft1025_6 ID=EsuBft1025_6|Name=EsuBft1025_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=366bp
MVQEEAEKEMKAAATLQELEDLRRKYMTKKGPVQRVMGQMRLLSPEDKPK LGKVSNVVKASLEETLKSSKAALENAAVEAEMEKDKVDLTLPGIQSGRHA PHGHRHPLSIMTELATDVFIDMGYSLVDGVEDAPEIENDYYCFEALNCPK DHPARDMQDTFYIEHEEGEEPLLLRTHTSSVQIRALERLKPPLAIVAPGR VFRRDTPDATHNPEFHQIEILNVQKSGELHLGHLKGTVDHFLKKMFGPDV KTRYRGSYFPFTEPSMEVDIWFKGKIDGKTTSFASPPRARPLQINRWMEV LGCGMVDPRVLEMAGVDPEEYSGFAAGFGVERFAMVLFGVQDLRNFWSSD MRFLEQFPADIQASGT back to topmRNA from alignment at Scaffold_38:83901..90733+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1025_6a-0001 ID=EsuBft1025_6a-0001|Name=EsuBft1025_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6833bp|location=Sequence derived from alignment at Scaffold_38:83901..90733+ (Ectocarpus subulatus male Bft15b) CCGTCTCGAGCGAGCTGCTGATGGTACAGGAGGAGGCAGAGAAGGAGATG
AAGGCGGCCGCAACTCTGCAGGTACAGAATGACGTTCAATACTCCGCGGT
TTATGCGTGGGAGCTGACCGTTGCTTGCTTTTTGGCCACAGGTTTCGAGG
CATCCCCAAACAATGAACGGCATTGGCGTCACCCTTTTCTTGTCCCTCAT
GTACCCTCCCGCTACTGTTGAGAATGCCGTTGTTGTTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCGGTTGTTGTCGATGCTGCTGCTTCC
CCCTGCGGCTGCTGTTGCACTTGCAGGAGCTAGAAGACCTTCGACGCAAG
TACATGACCAAAAAGGGACCAGTGCAGAGGGTCATGGGACAAATGAGACT
CCTCAGCCCGGAAGACAAGGTACGTGGCGACTCGGTCGGAAAGGACTAGA
CGGGGGGGCTTAGTGCCACCGTTCTTCTTTTGACACCATGAGTGTGTTCT
TTTTTATTCCGCCGACTTTTTTTTCTCCTCATCATCCCGGATATGCCCTG
TTTTATTCCACTACAGCGGTGTTTACGAGGCACGGCTGTAAAACTTTCTT
CTTCCGTAGTGAGATGAATGGCGCTACTCCGTCTCCATGTCGCCATCCGT
TGCGGAAAGGAGGATGTGCCGCAACAACAAAGTACCGCCCGCCACAGAAT
ATCCCACAGCCGTTTCTCTCCTAGGGTTCAAGCGACCGACCAACGCTCTA
GTGTTGGCAATGGTCCCCGTGAGAGGCCCCCTTTCGTGATGGCGCGTCCA
CCCGTCCGTCCAAAGTAGCACAACCCTTCATGGTTCAGTGTGTTGCCCCT
CCCCTCCGCGCGGCAGCGGCGTGGGGGGGCACCCGGTGGGTGACCGTTGG
CTCTGCAGTATTCGACTCATCCGTCGACCTCAACATTGTGTTGTTGCTGT
TGCTGTTGCTGTTGTCGTTGTCGTTGTCGTTGTCGTTGTTGTTGGTGTTG
GTGTTGTTGTTGTTGCTATCTTTGATTGCGGTGATGGCGTGAGGCAAGGG
GCAGGTCGGTCTTCGTTCTGGAGTTATTTTCCCGAGCGGTCAGATGCTCA
CACCTCCCGCTGTGGCGACTGTATCGCGTTCAAGCCGCCGTTACAGCCCG
TCTCACGAAAAGACTCCTCCGCGATCCGTCCATGTCTCAGGAGGCTTCAT
GGCCAGACAACGGTTGGACAATCCTTTCCCTCTGTCAACTACCAAAGTCG
ATTGTTTTTTGCTTGCCACTTCCCATTATTATCTCGCTGTTGTTCTTCCC
CTGAACTTTGCGAGCCAGGACCAAGTCGAGGCTAGCTGTGTAGGAACACG
GGCGTATGAAACCTGCCCCCCCCCCCGCCCCCCACGTGTGTGTGTGTGTA
CTATGTTTTCGGCCAACGAGAGGTTTGCAACTACGTGATGAGAAAGAAGG
ACACCACTTGTTTAATATCCCCTCTCTGTGTGTCGGTGCTCTCTATCCCC
TCCTCCTCTTTCGTACCGCCGTCGTTCCTCTTCCCGTACGCGCTCTTCCT
GCGTTGACGCTGCTGCTGCTGCTGCTACTGCTGCCGCTGCTGCTGCTGCT
ACAGCCGAAGCTGGGTAAGGTTAGCAATGTAGTGAAGGCGTCCTTGGAGG
AAACGCTCAAGTCTTCCAAGGCCGCGCTCGAGAACGCTGCCGTCGAGGCG
GAGATGGAGAAGGACAAGGTGGACCTCACGCTGCCCGGGTGAGCCTATCT
TAACTTTTCCACTCCACGAGACTTGTTTTTTGTTAATGCTCCAGTCAGAG
GATTACCGTAGATTCCATAAGATACCATACCCCCTGGACCAATTTTCAAA
GCTCGATTACTCCATCACGAAGAGGATGTCGAGTTCAAATGTTCAAATTA
TACGTGTTCGGAAAGCTCTGGCGACTTCGACCCCTAAGTTTTTTCTTTCT
TTCTTTCTTCCACCTGGTTTTCTTGGGAACACTCCCGCAGCCACCGGACA
CTTGCACATACCCAACGTAAACTGTAGCAGTCACGACAGGGCTGACGAGG
CGAGAAACATTCACTTTGCTACCCCCTAACATGATCAAGACATGTTAGCT
TGCCAATAGCGTTGTCTGTTGTGAAAACATCGTACGACTCAGGAGGTCTG
TGCCATAAAACGTTCCCATTTCTACCCCCCGAACATGATTAAGACACGTC
TCCAATAGCGTTGTCTGTTGCGAAGACTGGTACGACCTAGGACGTCTCTG
CGGGAAGCACCACAACGAATATTTAGGTGAGTACCCAAAACTGGTTCATC
CATGGCGACTCGACCGTTCGTGTGGCGACCGGCTTTTTTTTTTTTTTTAC
TCTTATCTTAGGATCCAAAGCGGGAGGCACGCCCCGCACGGGCACCGGCA
CCCGCTGTCCATCATGACGGAGCTGGCCACGGACGTGTTCATAGACATGG
GGTACTCCCTTGTCGACGGCGTGGAGGATGCTCCCGAGATCGAAAACGAC
TACTACTGCTTCGAGGCGCTGAACTGCCCCAAGGACCACCCGGCGAGAGA
TATGCAGGTAAAGTACAGCAGCAGGCAGTCAATCAGTCGAGTCGTCCCCG
CCTTCAAGGACACCAGCATTAGGGATACTCCCCCGATTTAGGGACACTTT
TTAAGGAAGCACGCTGCAGGGTTCCAAAAACACACCAGCATTATCGATAG
TTTTCGATAGTTTTTAGTGCTATCCCCGCTGAAGGACGACACGGGTGTCC
ATAAGAACGCCAATGATTGGCGACATTCCCCGCGTTGTGGACAACTTTTC
TTGAAGAACACCAGGTGTCCTTAAAGACGCCAACATTTACGACATTTTTC
TATGAAGGTTGCCACGAGTGTCCTTGAAGACACCAACGATATGCAGGTAC
AGTACAGCAGCAGGCAGTCAATCAGGCGAGTCGTCCCCGCCTTCAAGGAC
ACCAGCATTAGGGATACTCCCCCGATTTAGGGACACTTTTTACGGAAGCA
CGCTGCGGGGTTCCAAAAACACACCAGCATTAACGATAGTGCTATCCCCG
CTTAAGGACGACACGGGTGTCCGTAAGAACGCCAATAATTAGCGACCCTC
CCTACGTTGAGAACACAGCAGTGAAGAACGCCATGAGCGTCCGTAAAGCG
CGAAAGACTGTGCCTGTTTTTGGCTTACAATTGTTCATCGCCCCTTCGTT
GGAAACTTCTCAAGTCCTCATACAACACAAGGATTTTTTTTGTCGTTTTT
GCTTTTACGTGGGCCCGCTCAAGGTTATGTAGCCCAATCTCTGATTTATC
TCTCCTCCATTTGGTTTCGAAACGCACGCAAATAACCTTCTGGTACTCTC
ACCTCCTCAACAGCCATCAGCTCGAGGAAGACTCCCGGCCATGCCTTACA
ATTATGAATGTGAGAGCCTGGTCCTCCCCCCCGGTGTTTACCATCGGGGT
TGGGTTTTCGTCGCATGGCAACGACGTTGTAAAACAAGGCCCCCAATCGG
TGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGACGTCGTAAAA
CAAGACAATTCACTTCGTGAGCTCGGCAACCAGGTTACCGTTTTTTATTT
TCTTACCTCTTTTTTTTTTTGGCGGTAACCATGATGGTGGTCGAGTAGAT
CATGTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCC
GCCCCGCCCTCAGGACACGTTCTACATCGAGCACGAGGAGGGGGAGGAGC
CCTTGCTCTTGCGCACTCACACGTCGTCGGTGCAGATCCGGGCCCTGGAG
AGGCTGAAGCCGCCGCTCGCCATCGTGGCGCCCGGCCGGGTGTTCCGCCG
AGACACGCCGGACGCCACCCACAACCCCGAGTTTCACCAGGTGTGTGTGT
GTGTGTGTGTGTGTTTTTTTTTTTTGCTGGTATTGTTGTTTTCGTTGATG
TCTTCGCAATCTTTATTATCAGTTCGGCCTGTCTATGCATCCAGCTTTCG
TTGTTGTTGCTGTTGTTGCTGTTTTGTTTTTTGTGGTTGTTTTTGGTGTA
CTGATTTTTGTCGTCATCTATTTGATGAGTTCGAACCCTCTCGATGTATT
CAGTACCATCTCGTGTTCTCTGCCCTTCAAAGACGAGAAGGAATCTAGGT
GCTTCTCCTGGATACAAGAAAATCCATAGAGGTGCACACACGAAAAAATA
AAAAGTAATGGGCACAAGGGTATTCCTACACTGACGAGCAAGTGAAGCTC
ATAGGTGGAAGGGCCTGCACCGTTTTTATTCATTTTCATGACATTGATTC
CACAAGGTATCACCCCCCGCCACCCCAGTTGTGGTGCCCCTTATCGCCGC
GCGGTCTCTGCATGTACCATCCACCATACAAGGCGTACATGAATACACGT
GGACGGTTTCGGACGGAACACCCCGCTAGAACTCTCGCAAACGATCTCCC
CGTGCTGTAGAATATGCCGCGAGAGCATTTTACTGAGCATTCACAACGTG
GTTGTGATATTTTTTCAGGCCGACACGAGCCCTATACGACTACTCTCAGA
TCAAGCAAGAGGCGACACAAAATACCCCACACGCCACCCAACAACATGCC
TGGTCTTATATTATTTGAAATCAACAAGTTGATCTTTTCATTGGGGGTGT
TTTTTCGTGCCGTGTATAGTTGGCGTATACAGCGTTTCTTTTTATTTCGG
GAATACCGTATATGACACAAGATAACACACCCCCTTGACCGATTTTCGAA
GCTCGAATTCTCAACTGCCGGAACAGTCACAGCGCCAAAAACTGCGGCGT
TGAAACCGTCTCATCGAGAGCTTTTCGATAATGTATCGTTTCGTTTGTGC
ATCTTCTTCATCGTGGAGTAATCGAGCTTTGAAAAATCGGTCCAGGGGGT
GTGTTATCTTGTGTCATATACGGTATATGCCGGACTCGCCCGACACATTT
TCCATCACAAACACATATTTCATCACAAACACTGGAGACATTACGCATGC
ACAATGAACAATACAAACCCTCCTGTTGTACGCGTACTTGGCGCCATTTC
TTTTTTGCAGCGAATTCGCGGCGGCAGCCGGCCCCTATCCATGCACTCTC
TGGGAGGAGTACGATTGTATCGAGCTACACCGTGTTTCGAAAAGGGTCGA
TGATTTGTGGCAGTACCAACTTTCGTAATTTAAATTAGCAATGTTTTGCT
CCACTTTCAGCTAAAGACCCTATGGTGTAGTCGGTAACACTGCAGACTCT
GAATCTGCCACCCTGAGTTCGAGTCTCAGTAGGGTCACATTTTTTTCCGC
ACAGAGACGCCGACAACTTGTTTGAATTGATCCTGTCGTCGCCTGATTTT
CGTGAGAATGCTGTTGCCATGATTATTAATGTGGTACCTTGTACTACTTT
TTTGTTTTTGTGCAAAGGAGCAGTTTTTAGAGGACCGCCGATCAGTACCC
TCGTTGAGGTGGGAATTTTCTTTTTGGTTAATAAAAAACATGTTTAGAAG
AAACCATACCCCGAAAATTCTTGTGCTGGCAAAAAATAGAATCACTGCGG
GCGTGCGAAACCTTTCCGTAAATGATGCGACGTGCTGGATCTTTCAGCAG
CAGACTCGAGCCCATCTCACACCACATTACCAGCCAATCGTTGTGCATCG
GACATTTGAGTAGAGGAACATCGTTCTCAGTTCGTTGGGGTAGCGCGTGT
CTGCTTTGTTTGCTTTGTTGTCGGCATCCATCCCCACGTAAGTACATCGA
GAAAGGCATATTTTTTTGAAACGAGCGTTGTAATATTGAGAGGGAGGGGA
GGGATGTGTAGGAGGAGGAAGAAAGGTGGGAGAGGGAGACTGGTGTGACT
TCGAAACTACTGCTGTCAGCTGACTGTGGGAGTGAGAAGAAAAGGGAGGG
CGTGGACACACGCGCACCCTTGTGTGTTGCTATTGTGTGCTTACAGCTGT
AGTTTCGCAGACACCAAAGTGCGTAGACGGATAGCGCATGCTGTCGATGG
TAAAGAGTCAAGCATCTCTTCCCGCCCCCCTCTCAGATCGAGATTCTCAA
CGTCCAAAAGTCGGGGGAGCTGCACCTGGGCCACCTCAAGGGTACGGTGG
ACCACTTCCTCAAGAAGATGTTCGGCCCCGACGTTAAGACGAGGTACCGG
GGGAGCTACTTCCCCTTCACGGAGCCCAGCATGGAGGTGGACATCTGGTT
CAAGGGGAAGTGAGTGTCGTTGGTACACTTTGGGATAGCACGCCTCTCGT
TTTTGTTTACGTTCCCTGTTCCCGCCCCAAGATTACAAATGGAGGAAGAA
GCAAAGGTGGGTGGAGACACTGACGCGGAAGAACGGGCCCCCGTCGTATG
CAGCAGGATCGACGGAAAAACAACCAGTTTCGCATCCCCCCCCCGCGCGC
GCCCCTTGCAAATCAACAGGTGGATGGAAGTGTTAGGGTGCGGCATGGTG
GACCCTCGCGTGCTTGAGATGGCCGGAGTTGACCCCGAGGAGTACTCGGG
CTTCGCGGCCGGGTTCGGGGTGGAGCGTTTCGCCATGGTCTTGTTCGGGG
TGCAGGACCTTCGCAACTTCTGGAGTAGCGACATGAGGTTCCTGGAGCAG
TTCCCAGCGGACATTCAGGCAAGCGGCACATAA back to topCoding sequence (CDS) from alignment at Scaffold_38:83901..90733+ >EsuBft1025_6a-0001 ID=EsuBft1025_6a-0001|Name=EsuBft1025_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1101bp|location=Sequence derived from alignment at Scaffold_38:83901..90733+ (Ectocarpus subulatus male Bft15b) ATGGTACAGGAGGAGGCAGAGAAGGAGATGAAGGCGGCCGCAACTCTGCA GGAGCTAGAAGACCTTCGACGCAAGTACATGACCAAAAAGGGACCAGTGC AGAGGGTCATGGGACAAATGAGACTCCTCAGCCCGGAAGACAAGCCGAAG CTGGGTAAGGTTAGCAATGTAGTGAAGGCGTCCTTGGAGGAAACGCTCAA GTCTTCCAAGGCCGCGCTCGAGAACGCTGCCGTCGAGGCGGAGATGGAGA AGGACAAGGTGGACCTCACGCTGCCCGGGATCCAAAGCGGGAGGCACGCC CCGCACGGGCACCGGCACCCGCTGTCCATCATGACGGAGCTGGCCACGGA CGTGTTCATAGACATGGGGTACTCCCTTGTCGACGGCGTGGAGGATGCTC CCGAGATCGAAAACGACTACTACTGCTTCGAGGCGCTGAACTGCCCCAAG GACCACCCGGCGAGAGATATGCAGGACACGTTCTACATCGAGCACGAGGA GGGGGAGGAGCCCTTGCTCTTGCGCACTCACACGTCGTCGGTGCAGATCC GGGCCCTGGAGAGGCTGAAGCCGCCGCTCGCCATCGTGGCGCCCGGCCGG GTGTTCCGCCGAGACACGCCGGACGCCACCCACAACCCCGAGTTTCACCA GATCGAGATTCTCAACGTCCAAAAGTCGGGGGAGCTGCACCTGGGCCACC TCAAGGGTACGGTGGACCACTTCCTCAAGAAGATGTTCGGCCCCGACGTT AAGACGAGGTACCGGGGGAGCTACTTCCCCTTCACGGAGCCCAGCATGGA GGTGGACATCTGGTTCAAGGGGAAGATCGACGGAAAAACAACCAGTTTCG CATCCCCCCCCCGCGCGCGCCCCTTGCAAATCAACAGGTGGATGGAAGTG TTAGGGTGCGGCATGGTGGACCCTCGCGTGCTTGAGATGGCCGGAGTTGA CCCCGAGGAGTACTCGGGCTTCGCGGCCGGGTTCGGGGTGGAGCGTTTCG CCATGGTCTTGTTCGGGGTGCAGGACCTTCGCAACTTCTGGAGTAGCGAC ATGAGGTTCCTGGAGCAGTTCCCAGCGGACATTCAGGCAAGCGGCACATA A back to top
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