Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1022_4 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TRANSMEMBRANE |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 169 |
| Hectar predicted targeting category | signal anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1022_4a-0001 ID=EsuBft1022_4a-0001|Name=EsuBft1022_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1698bp|location=Sequence derived from alignment at Scaffold_103:248788..251367- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCTTCCTCTGTTTCTTGTCAAAGTTTATTCGGTTGGACTTGAACGT
GCCCACGATCATCGTTTTGGCCACCGTGGCCATTTCGTTCGTCGCAGACT
CCTTTGTCCTCGTCTTGAACGTGGACGGACCGGGGTCGACCCAATCGCAG
CAGCAGCTGATGAACGTGGATGGGCCGATGGAGTCAACACAGCAGCAGCA
GCAGCAGCAGCCGATTGACGCGAATGGGCCGACGGTGTCGACACAACCGC
AGCAGCAGCCGACGGAACGGGCTCCCATGTGGACAGTAGCGAACGTGGGC
ACGACCACTGAAAGCAAGGGCCGCGATGCAACCAAGAGGGTGCACAAACG
GCGCGTCCGGTGGCCCACTAGGGTCGTTGCGAAGGAAAACGCGCGCATAC
TTGAAGCTTGTTTGGGTGATGATGAGCTGACCGACTTCATGGAAAGAAGC
AAGGCAAAGGCCGATGAAAAAGCGGAAGAGATCGAGGGTACGTGTTCCCG
TGCGGGGAAGGAGCCGCCCCATGCAATCACATCGATCCCTCTCATCGCCA
AACTACTCACTCCAGGGTTATGCGATGACCCTGGCATAATGCATCAGTGG
GGTCTCCTGGAGAAACGGACCGACGGCGTTGTGACACTGGAAGCCGAGCA
ACGGCGGTTCGTTATCCACCTGGTCACGACGTACGTGAACATGATAACTC
ATGTCGTGCCGGCTAGACTCGCAAACATGAGAGGAAAACGGAAGGAGGAG
CTGGACCAAATCATCAACCGGGTGAACACCCTGCGGGACCTGATGCTGAG
AGTCTTCACCGATGCCGCCGTGAAGGACACCCTGCCTGCGATTTTCTGGG
AGGTATATGGGAACAAGGATTTGCGCGAGTTCGCCGAAGAGACTGGATCG
CTCAGAGAGATTAACTTCCTGGATCGTCTTGAGTGTGCCCACAACACCGA
GTTGTCTGGAAAATCGTTCACCGGAGAGGTTGTGACTAGAGTGTCGGTCG
TTGGGTGTGGGATTCTGGACGCTGCAAAGCATGGGATTCTTCAACGGGAC
TCGCTGGACTCGAATTACTTCAGCCACGCGCGATTGGCAAGAAGCCCTTC
ACTGATGGGGAATGCTCCGTTCAGCAAACTGACGCGAGCGTCGGTCAAGG
AGCGCCGGTTGAGGGTCATCGTGGTGGATCAAACTCCAGAGGAGCGGGAG
AAAAGCATCGATACGTGCATGGCAGCTATCGCCAAGAATGGGTGCGGACG
CCTGATGGACACCGTCAAGAAGCATGACCCCGGCTTCGTCGAGTGGGGGA
AGGAACATCTTGCAAAGGCGAAAATAAATTCAACCATTTGGTCTAGCAGG
GAGGAGTTCATCGAAAAGCCCGATGACGGCCGCTCTGAAGACAATCTGGA
GGGAAAAGCTCCCGAGGAGATTAAACATGGGCAGCGGAGGGTGGCGAACC
TCATGGCGAAGCTAGAGGTAGGTGATGATTTCACGTGTAAAGATATCTCC
GTCTTCAGCGTGGCTCTGAAGCTGCCTGGCTGCTCGCAGCAGCCGTTTTG
TATGGTGGCCAGTCAAATGTACTACGACGCGAAGGAGAAGAGGATCAAGA
TTCGGCTGCTAGACGGAAAGCAGACGAATGAAACCAAGCAAGATCCCTCG
AGATTTTGCATGGAAAATGAACTAGAGGGTGGGGAGGTCGTGGAGTAG back to topprotein sequence of EsuBft1022_4a-0001 >EsuBft1022_4 ID=EsuBft1022_4|Name=EsuBft1022_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=565bp
MFFLCFLSKFIRLDLNVPTIIVLATVAISFVADSFVLVLNVDGPGSTQSQ
QQLMNVDGPMESTQQQQQQQPIDANGPTVSTQPQQQPTERAPMWTVANVG
TTTESKGRDATKRVHKRRVRWPTRVVAKENARILEACLGDDELTDFMERS
KAKADEKAEEIEGTCSRAGKEPPHAITSIPLIAKLLTPGLCDDPGIMHQW
GLLEKRTDGVVTLEAEQRRFVIHLVTTYVNMITHVVPARLANMRGKRKEE
LDQIINRVNTLRDLMLRVFTDAAVKDTLPAIFWEVYGNKDLREFAEETGS
LREINFLDRLECAHNTELSGKSFTGEVVTRVSVVGCGILDAAKHGILQRD
SLDSNYFSHARLARSPSLMGNAPFSKLTRASVKERRLRVIVVDQTPEERE
KSIDTCMAAIAKNGCGRLMDTVKKHDPGFVEWGKEHLAKAKINSTIWSSR
EEFIEKPDDGRSEDNLEGKAPEEIKHGQRRVANLMAKLEVGDDFTCKDIS
VFSVALKLPGCSQQPFCMVASQMYYDAKEKRIKIRLLDGKQTNETKQDPS
RFCMENELEGGEVVE back to topmRNA from alignment at Scaffold_103:248788..251367- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1022_4a-0001 ID=EsuBft1022_4a-0001|Name=EsuBft1022_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2580bp|location=Sequence derived from alignment at Scaffold_103:248788..251367- (Ectocarpus subulatus male Bft15b)
ATGTTCTTCCTCTGTTTCTTGTCAAAGTTTATTCGGTTAGTCAGCTTGTC
AACTGTACTTCTCGTCCCCTGGTCTTGTACATCCGAAAAGCTGTCCTGTC
CTTTCTGTTCTCCCTATAGACTACAGATGATCTGAGATTGGTTTCTCTCT
CTTTCTTGTTTCGGTTTAAGCGGAGAAATGATCTGAATCGTCGTTGAGGC
ACCTTTTAACATGAGACTTTAGGTTGGACTTGAACGTGCCCACGATCATC
GTTTTGGCCACCGTGGCCATTTCGTTCGTCGCAGACTCCTTTGTCCTCGT
CTTGAACGTGGACGGACCGGGGTCGACCCAATCGCAGCAGCAGCTGATGA
ACGTGGATGGGCCGATGGAGTCAACACAGCAGCAGCAGCAGCAGCAGCCG
ATTGACGCGAATGGGCCGACGGTGTCGACACAACCGCAGCAGCAGCCGAC
GGAACGGGCTCCCATGTGGACAGTAGCGAACGTGGGCACGACCACTGAAA
GCAAGGGCCGCGATGCAACCAAGAGGGTACCCAAAGCTGGCAAGGCTAAG
GCTGGTTCGATAGCTCAAGGTGCACAAACGGCGCGTCCGGTGGCCCACTA
GGGTCGTTGCGAAGGAAAACGCGCGCATACTTGAAGCTTGTTTGGGTGAT
GATGAGCTGACCGACTTCATGGAAAGAAGCAAGGCAAAGGCCGATGAAAA
AGCGGAAGAGATCGAGGGTACGTGTTCCCGTGCGGGGAAGGAGCCGCCCC
ATGCAATCACATCGATCCCTCTCATCGCCAAACTACTCACTCCAGGGTTA
TGCGATGACCCTGGGTTGGTATCGAGATCTTGGATGGAGTGTATTTCAAC
CGGAGATCGAGCGTTACTTCAACGGGGAGTACGTGTTCGATCCAAAGAAC
ATCGGGGTGGTTTTGGGCAAGACCAAGGTTGAAGTCAACGGCAAAGAATT
CGTGGTGGAATCATTCGATTGAGGCGAGTACGTTCTGTTGGATGATAGCA
TAATGCATCAGTGGGGTCTCCTGGAGAAACGGACCGACGGCGTTGTGACA
CTGGAAGCCGAGCAACGGCGGTTCGTTATCCACCTGGTCACGACGTACGT
GAACATGATAACTCATGTCGTGCCGGCTGTGATACAAGAGTCCTGTGAAA
GCATGACGAAAGACATGCTGCGGAGCCCCGAAGAGACTCGCAAACATGAG
AGGAAAACGGAAGGAGGAGCTGGACCAAATCATCAACCGGGTGAACACCC
TGCGGGACCTGATGCTGAGAGTCTTCACCGATGCCGCCGTGAAGGACACC
CTGCCTGCGATTTTCTGGGAGGTATATGGGAACAAGGATTTGCGCGAGTT
CGCCGAAGAGACTGGATCGCTCAGAGAGATTAACTTCCTGGATCGTCTTG
AGTGTGCCCACAACACCGAGTTGTCTGGAAAATCGTTCACCGGAGAGGTT
GTGACTAGAGGTTTCTCTGAGCACCAAAACCAGAGCATGTAGCGGGCCCT
GGCATGCGAAACTGACCAGCATCATCGAGCAGTTGACATGTGCGTATCGA
TTGGGCCGCTAGGATAACTTCCTGGAGGCATATTACGCGCTGTCTGAGGC
GGAGATAAGGCTATTGGTTCGTCACCACAGCCACTGAAATATCAACCTGA
AGTACGGTCTCAGACATCTGGATCGATTGGTATCAGCACAAACCACTGCC
ACCGATGCCGACCTTGAAGGAGAGAATTCGCACACGTTGCGTTTTGCTGT
GAAGCGGTGCCGGATTTTTAACCAACATTGTACCAGTGTCGGTCGTTGGG
TGTGGGATTCTGGACGCTGCAAAGCATGGGATTCTTCAACGGGACTCGCT
GGACTCGAATTACTTCAGCCACGCGCGATTGGCAAGAAGCCCTTCACTGA
TGGGGAATGCTCCGTTCAGCAAACTGACGCGTGAGGCGATTGAAGCATAG
GGGAAGTTGTTTGACGTTGCAAGGAATGGGAGAGTCAGAGCAACTGTTGA
GAAGAGCGGGGCCGTAGGAGCGTCGGTCAAGGAGCGCCGGTTGAGGGTCA
TCGTGGTGGATCAAACTCCAGAGGAGCGGGAGAAAAGCATCGATACGTGC
ATGGCAGCTATCGCCAAGAATGGGTGCGGACGCCTGATGGACACCGTCAA
GAAGCATGACCCCGGCTTCGTCGAGTGGGGGAAGGAACATCTTGCAAAGG
CGAAAATAAATTCAACCATTTGGTCTAGCAGGGAGGAGTTCATCGAAAAG
CCCGATGACGGCCGCTCTGAAGACAATCTGGAGGGAAAAGCTCCCGAGGA
GATTAAACATGGGCAGCGGAGGGTGGCGAACCTCATGGCGAAGCTAGAGG
TAGGTGATGATTTCACGTGTAAAGATATCTCCGTCTTCAGCGTGGCTCTG
AAGCTGCCTGGCTGCTCGCAGCAGCCGTTTTGTATGGTGGCCAGTCAAAT
GTACTACGACGCGAAGGAGAAGAGGATCAAGATTCGGCTGCTAGACGGAA
AGCAGACGAATGAAACCAAGCAAGATCCCTCGAGATTTTGCATGGAAAAT
GAACTAGAGGGTGGGGAGGTCGTGGAGTAG back to topCoding sequence (CDS) from alignment at Scaffold_103:248788..251367- >EsuBft1022_4a-0001 ID=EsuBft1022_4a-0001|Name=EsuBft1022_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1698bp|location=Sequence derived from alignment at Scaffold_103:248788..251367- (Ectocarpus subulatus male Bft15b)
ATGTTCTTCCTCTGTTTCTTGTCAAAGTTTATTCGGTTGGACTTGAACGT
GCCCACGATCATCGTTTTGGCCACCGTGGCCATTTCGTTCGTCGCAGACT
CCTTTGTCCTCGTCTTGAACGTGGACGGACCGGGGTCGACCCAATCGCAG
CAGCAGCTGATGAACGTGGATGGGCCGATGGAGTCAACACAGCAGCAGCA
GCAGCAGCAGCCGATTGACGCGAATGGGCCGACGGTGTCGACACAACCGC
AGCAGCAGCCGACGGAACGGGCTCCCATGTGGACAGTAGCGAACGTGGGC
ACGACCACTGAAAGCAAGGGCCGCGATGCAACCAAGAGGGTGCACAAACG
GCGCGTCCGGTGGCCCACTAGGGTCGTTGCGAAGGAAAACGCGCGCATAC
TTGAAGCTTGTTTGGGTGATGATGAGCTGACCGACTTCATGGAAAGAAGC
AAGGCAAAGGCCGATGAAAAAGCGGAAGAGATCGAGGGTACGTGTTCCCG
TGCGGGGAAGGAGCCGCCCCATGCAATCACATCGATCCCTCTCATCGCCA
AACTACTCACTCCAGGGTTATGCGATGACCCTGGCATAATGCATCAGTGG
GGTCTCCTGGAGAAACGGACCGACGGCGTTGTGACACTGGAAGCCGAGCA
ACGGCGGTTCGTTATCCACCTGGTCACGACGTACGTGAACATGATAACTC
ATGTCGTGCCGGCTAGACTCGCAAACATGAGAGGAAAACGGAAGGAGGAG
CTGGACCAAATCATCAACCGGGTGAACACCCTGCGGGACCTGATGCTGAG
AGTCTTCACCGATGCCGCCGTGAAGGACACCCTGCCTGCGATTTTCTGGG
AGGTATATGGGAACAAGGATTTGCGCGAGTTCGCCGAAGAGACTGGATCG
CTCAGAGAGATTAACTTCCTGGATCGTCTTGAGTGTGCCCACAACACCGA
GTTGTCTGGAAAATCGTTCACCGGAGAGGTTGTGACTAGAGTGTCGGTCG
TTGGGTGTGGGATTCTGGACGCTGCAAAGCATGGGATTCTTCAACGGGAC
TCGCTGGACTCGAATTACTTCAGCCACGCGCGATTGGCAAGAAGCCCTTC
ACTGATGGGGAATGCTCCGTTCAGCAAACTGACGCGAGCGTCGGTCAAGG
AGCGCCGGTTGAGGGTCATCGTGGTGGATCAAACTCCAGAGGAGCGGGAG
AAAAGCATCGATACGTGCATGGCAGCTATCGCCAAGAATGGGTGCGGACG
CCTGATGGACACCGTCAAGAAGCATGACCCCGGCTTCGTCGAGTGGGGGA
AGGAACATCTTGCAAAGGCGAAAATAAATTCAACCATTTGGTCTAGCAGG
GAGGAGTTCATCGAAAAGCCCGATGACGGCCGCTCTGAAGACAATCTGGA
GGGAAAAGCTCCCGAGGAGATTAAACATGGGCAGCGGAGGGTGGCGAACC
TCATGGCGAAGCTAGAGGTAGGTGATGATTTCACGTGTAAAGATATCTCC
GTCTTCAGCGTGGCTCTGAAGCTGCCTGGCTGCTCGCAGCAGCCGTTTTG
TATGGTGGCCAGTCAAATGTACTACGACGCGAAGGAGAAGAGGATCAAGA
TTCGGCTGCTAGACGGAAAGCAGACGAATGAAACCAAGCAAGATCCCTCG
AGATTTTGCATGGAAAATGAACTAGAGGGTGGGGAGGTCGTGGAGTAG back to top
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