Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G0R0 |
| ProteomeId | EsuBft101_16 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 121 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.49e-181 |
| EggNOG OGs | KOG1267@1|root,KOG1267@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K15031,ko:K15032 |
| Description | termination of mitochondrial transcription |
| COG category | S |
| BRITE | ko00000,ko03012,ko03029 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft101_16a-0001 ID=EsuBft101_16a-0001|Name=EsuBft101_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1218bp|location=Sequence derived from alignment at Scaffold_627:635186..639625- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTGACGGGGAGGGCGTTTCTCGACGAAACGGCCACAGTTAGCGACGA
TGACGACCCCACCGCCGCCGCTGTCGTGGCGATGAAAAAGGGCGGCTCCA
GCCACCGCCGGAAGAGCGCCGCGCGGTCTTCCGCTAACCCGACAGCTGGT
CGGCTATCGCTGCGCCAGGCGGGGTCAGGGGGCGACCAGCTGTTAGGCCC
GCAACCACCGCGGGAGGGGGGGAACGACGACGATGAGGAGAGTAGCTCCA
ACCCGTCGCTGCTTGAGCGTTCGGAGGTGGACGCCATCCTGTCGGAAGCG
GCCTCGGCGAGCGGTGGCGCCGGTGTCGAAGGCGATGCCAACCTCGACGA
TGCTGCCGCCGTTGCTGCTGGGGTGCGGGAGGGGGGCGGAGAGAGCTACA
AGACGGAGGTTGAGGACGGGCTCAGGGCGCTGATGGGAGAGATCGGCTTC
GGGCAAGAGGAAGTGGCGGCGTACAGCCTGGAAGAGCTGCTGCTGCTGAG
AGAGGAGCTCGAAAAGGAATGGGCGGCTGCGGAAACGGAGGAAGTGTCGC
CTTCCCTCAAGACGGAGAAGCGCGGAGGAGAGCTGAGACGAGCTGGATCC
GCCGAGGAAGAGGAGGAAGAGGAGGAGGAGGAAGGGGAGGAGGAGGATAG
AGATGCGGAGCCCCCTTGGGAGCGCCACTCGCTGTCGCTTCAAGAGAGGC
TGGGCTTGTCGGACGAAGAGGTGGAAAAACTCAGACGATCACCGCGATCA
GGTCTCGCTCTCAGCGGAGGCGTCCTTGATTCCTCCGATTCCAGGGGGGC
CGCGGCGGACGCGTCCCCTGGGTTGGATGCCGGCGGTAGGGGGGGCACCG
CGGATGGCGTGAAGGTATCCCCCGGGTCGGGTGTGGTTGAATACGGTCGC
GAGGCTGCCGCTGCGGCTGCGGCTGCGAGCAGGATGAAGGAGAGGCTGAC
AGGGAGATCGGCGGGAGGCCCGCAGACAGCTGTCGGCTACCTCCTGGGGG
AGCTGCGCATGAGGCCCGAAGAGGTGAAGGATGCGGTGTTGCGGTGGCCA
GCTCTCATGTCGCTCTCCAAGAGGGGCCCCCACGCGGTGACCTCGTGGCT
GCAGGGCGGGCTGGGGCTTAGCACGGACGACGTCGGTAAGATGATCAGGA
AGAACCCGGCCATCGTGGCCTGCAGCATCGTGCACAACCTGCGGCCGAAG
CTCCGGCCTTGGTCTTAG back to topprotein sequence of EsuBft101_16a-0001 >EsuBft101_16 ID=EsuBft101_16|Name=EsuBft101_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=405bp
MLTGRAFLDETATVSDDDDPTAAAVVAMKKGGSSHRRKSAARSSANPTAG
RLSLRQAGSGGDQLLGPQPPREGGNDDDEESSSNPSLLERSEVDAILSEA
ASASGGAGVEGDANLDDAAAVAAGVREGGGESYKTEVEDGLRALMGEIGF
GQEEVAAYSLEELLLLREELEKEWAAAETEEVSPSLKTEKRGGELRRAGS
AEEEEEEEEEEGEEEDRDAEPPWERHSLSLQERLGLSDEEVEKLRRSPRS
GLALSGGVLDSSDSRGAAADASPGLDAGGRGGTADGVKVSPGSGVVEYGR
EAAAAAAAASRMKERLTGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWP
ALMSLSKRGPHAVTSWLQGGLGLSTDDVGKMIRKNPAIVACSIVHNLRPK
LRPWS back to topmRNA from alignment at Scaffold_627:635186..639625- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft101_16a-0001 ID=EsuBft101_16a-0001|Name=EsuBft101_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4440bp|location=Sequence derived from alignment at Scaffold_627:635186..639625- (Ectocarpus subulatus male Bft15b)
ATGTTGACGGGGAGGGCGTTTCTCGACGAAACGGCCACAGTTAGCGACGA
TGACGACCCCACCGCCGCCGCTGTCGTGGCGATGAAAAAGGGCGGCTCCA
GCCACCGCCGGAAGAGCGCCGCGCGGTCTTCCGCTAACCCGACAGCTGGT
CGGCTATCGCTGCGCCAGGCGGGGTCAGGGGGCGACCAGCTGTTAGGCCC
GCAACCACCGCGGGAGGGGGGGAACGACGACGATGAGGAGAGTAGCTCCA
ACCCGTCGCTGCTTGAGCGTTCGGAGGTGGACGCCATCCTGTCGGAAGCG
GCCTCGGCGAGCGGTGGCGCCGGTGTCGAAGGCGATGCCAACCTCGACGA
TGCTGCCGCCGTTGCTGCTGGGGTGCGGGAGGGGGGCGGAGAGAGCTACA
AGACGGAGGTTGAGGACGGGCTCAGGGCGCTGATGGGAGAGATCGGCTTC
GGGCAAGAGGAAGTGGCGGCGTACAGCCTGGAAGAGCTGCTGCTGCTGAG
AGAGGTCAGAACGAGCGGGCAAGCATGTTTCGAGATTGAGTTACTTCTGT
GTGTGCAACCTTTGCACCGATCTTAATCCAAACGTTGTCCCGTTATCTGG
GGCAGGAGAAAGATATATTGTAAGATTCATGCACAAGTCATGAGCGATAG
ACCAGGCGTCCTGCGTGCTGGTCGCATCTACAGGGCACAGGGTTGACCAG
ATATTGCATGTGCCCCCTCGTGGTCTGGTAGATTCGCCTTTTGCGCTCAA
GTTCATGTCGGGGACACTAAGATTCGACTAGTAATAGGAAGTCTTGGGGA
AACATGATCGATTGCCCCGCCCTTGCCGTGCAGGGCGTAGGCTGAATTGG
TGTGCGGGTAGTACACCATGCCACCATGGACTCCCGCCCTGCGAGTTGCA
CGGCTGTGCACCAGCCCGGCACCAGCCTTCCTTTTGGCCTTCACTTTTCG
CAATGTCCGACTGCATCGGCCAGTTTCTAGATATCGCTGTCGAGACTCAC
GAAGGTAGCACAGGTAGTTGCAGTTGGCGATGGAAACCCATCGCCACTTT
CACCCGAGCTGTCGGCAGATGCCTGTACAAAGTAGGCCACTTACCCCCCG
GGCAAGAGCCAGCCCAGAAAACAGTTGACGGTTTTCTCCAATGCCAGGAA
GGCCCCGCCTGGTATCTTCATCGCATCTGCTATGTTGCCAACACGTAGAC
ACGAACAAGAAAATTAAACACCACGAAAGGACAGCAAGTGTGTGCAACAA
CAGTCAGTCCCAACCGCTTGCGAGTCTCGAACAAAAAGCGTTTGCGCTGT
TTTTTATTATCATTTTCTTGTCTTGCCGGTGCAGGAGCTCGAAAAGGAAT
GGGCGGCTGCGGAAACGGAGGAAGTGTCGCCTTCCCTCAAGACGGAGAAG
CGCGGAGGAGAGCTGAGACGAGCTGGATCCGCCGTAAGTGCACGAATGAT
GGGTTCTTCGTGTGAGAAAGCGGCACATGGGCTGCGGGGGTAGCGGGGGG
ATTCCGGTGTTGGAGACGATTGAGGGGACCTCTTGGTGTTGTTACTCAAT
GGTTGGGCGGACTTTGATTGGTTTCTTCTCGGGCACACTTTCCCAGAGGG
AACGAACATGTTCCCACAATGAACTGCTTTCGTTCCGCGCACGCCCGTCC
GCGCTCGTGTTCCCCATTTCCCTCCCCTTCTGCTATCAGTTCAAAGCGGA
CATTGCGTGCTCTCCCGCCAAGGCTCTGATGCTCGAGCACACGCCATACA
CGCAGAGCCGCTCTCCGGCACACGAGGCTCGCCGCATGCTCGCTGACTCG
CCTTGCTGGATTCCCCGCTCATGGCCGAAAAGAACATGCCTTCTTTCGTC
CGAGGGTGAGGTATTCCACATGGTCAAGCGCAGCTGCTCAGCTAATGGCA
CATGCGGCGAACCTCTAGCAAGAGAGCGGCATTTACTGCGCGTGCTGCGT
GTGTGTGTAGAATGTGCTGGAGCGTCTGAGCCTTGGCAGCGAGCAGAGCG
CGCAATGCCCGCTTTGAAATAGTTGCAGCAGGGGGGAGGGACATGGGAAC
ACGAACGTCGATGGGCGCGAGCAGAACGAAAACAGATCATGTGGGAACGC
GTCACTTGGTTGGGGGACAGGGGTGGGGGGCGTACCGAAACAGGCGGAGA
GATGGCACCCTTCCCAGACAGACTTGTACAGGTCGGTTCGATTGCTCCAC
GACCGAGGGGGGGGGGGGTTCGGAAAGAACCCGATAATTCTACGGAAGGC
CGTCGACGACATGTGTAGATGATTCCAAGACCACCATTGTTGGTTGTTGG
CACAATCTCGGTTAGGGAGCAATCGGGGTTTGAAAATTGGTCTTGAGGGG
GTGCAATCTCTCCGCCTCTTACGGTAGCGGGGAGGGTGCCGGTGTGGAGA
CGATGGAGGAGACCTCTCGGTGTTATGAAATTGATAGATGGATTTGGTTG
CTCTTCTTTTTTTTTCCCTGCGGGAACGAACGAATGCACATGCTTTTGTA
TAACCAGACTCTACCCCTCCCTTGCCCACTCTCGCNTCAGGCTAGTGTGT
CATAAGGCAGACTATGCATAACCGTCATGTTGCCACTCACCCCCCCCCCC
CCCCCCGATATTATCGTTCCCCCTTTAATTGGCCGTGGGTCTCCTGTTCC
CGACCTTCCTGCTCTCTCCCCTACCTCCCCCTCGACTTCGGTCATCACAA
CTCACATCGCAGCAGGAGGAAGAGGAGGAAGAGGAGGAGGAGGAAGGGGA
GGAGGAGGATAGAGATGCGGAGCCCCCTTGGGAGCGCCACTCGCTGTCGC
TTCAAGAGAGGCTGGGCTTGTCGGACGAAGAGGTGGAAAAACTCAGACGA
TCACCGCGATCAGGTCTCGCTCTCAGCGGAGGCGTCCTTGATTCCTCCGA
TTCCAGGGGGGCCGCGGCGGACGCGTCCCCTGGGTTGGATGCCGGCGGTA
GGGGGGGCACCGCGGATGGCGTGAAGGTATCCCCCGGGTCGGGTGTGGTT
GAATACGGTCGCGAGGCTGCCGCTGCGGCTGCGGCTGCGAGCAGGATGAA
GGAGAGGCTGACAGGGAGATCGGCGGGAGGCCCGCAGACAGCTGTCGGCT
ACCTCCTGGGGGAGCTGCGCATGAGGCCCGAAGAGGTGACGGTAGTCTGA
TGGATGTGGTGGTAGGAGGGCGCGCCGCGCTTGTAGGAGGGCGCGCCGCG
CTTCCTTGCTAGTGCTATGGTTTATGTAGATGAAGGTCCTCGCCTGCGAG
CAGTTTGTGCTTCTCTTTCGGCATCCATGCGACACAGCTGCCAATATGTT
CCTTGTAACATCTCGAGCTCGAATCGCCCTTGTCCTCGAAAAGAAGGAGG
ACTAGGGAGCGGCTTTTGCTGGGGAGGGCGCGTTGTCTACCCGGCCGTAC
CTTGGCATTGGAGGGATCCAGAGCGACAAGAGCAAATATCCACGTTTCCA
TGCACTGCTGTACACGTTCGAGAAGGAAAATCCCATTGGGCGTCTGACGC
AAGAGAATAAACCGAACGGAAGTCTTGAAAAGGGTTTTCAATTCGAGTTC
ACAGGAACCCCAGGATCAGAATGATGCAGTTGTACTGCTGGTGGCTGTGA
GCGCCTATGTCGCTGTCGTTTCCGATGCGAGGATGTAGGACAGTCAGTGC
ACGACCGCCCTCCGTTGCTTCGTCAACCACCCCCCTCAGCGGCAGCAGAT
CCGTGCTTCAGCAAGAACGGGGACACCGGCCATACCGTGATCGAAACAAG
CTTGTGCGAGAACATGGACAGCACTGAAACACGCTCACTCATTCACGCAC
GCATAGCAACGTATCCCCCTGCAAGTCCAACCGACGCCTATTCATTGGTT
GGCCAATTGGCACTGTCGATGGTATATTACTTAAAAGAAGCACTCCACAC
TCGTTTTGAGTGATATGAGCGAGAGCCGTTTGTTTTTTTGTTCCTCATTT
TTTATCAGTGGTCACACCGTTGATGCCATGTAGGAGCTCCAATCCGTGGT
CCGTCACACAGAAGGGTTCCTCTCTCTGAGGCCCCCCATTATTCCTTCCC
GCGGTGCTTGCCTTCGATATATCACGTGAGAAGAGTGCAGCACTCTCTTC
GCTCAAAGCGTACAAACGAACTAGTAGCGCTTTCAACTCCTGAAAAAAAA
AACTTTCTTCCTCCCCTCCCCTCCCCTCAGGTGAAGGATGCGGTGTTGCG
GTGGCCAGCTCTCATGTCGCTCTCCAAGAGGGGCCCCCACGCGGTGACCT
CGTGGCTGCAGGGCGGGCTGGGGCTTAGCACGGACGACGTCGGTAAGATG
ATCAGGAAGAACCCGGCCATCGTGGCCTGCAGCATCGTGCACAACCTGCG
GCCGAAGCTCCGGTGCGTGTGTCGTGGTGTCAGGGGCTTCCATCGCAGAG
ATTGGCGTTTTTTTGTTCTTGTCGCAGGCCTTGGTCTTAG back to topCoding sequence (CDS) from alignment at Scaffold_627:635186..639625- >EsuBft101_16a-0001 ID=EsuBft101_16a-0001|Name=EsuBft101_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1218bp|location=Sequence derived from alignment at Scaffold_627:635186..639625- (Ectocarpus subulatus male Bft15b)
ATGTTGACGGGGAGGGCGTTTCTCGACGAAACGGCCACAGTTAGCGACGA
TGACGACCCCACCGCCGCCGCTGTCGTGGCGATGAAAAAGGGCGGCTCCA
GCCACCGCCGGAAGAGCGCCGCGCGGTCTTCCGCTAACCCGACAGCTGGT
CGGCTATCGCTGCGCCAGGCGGGGTCAGGGGGCGACCAGCTGTTAGGCCC
GCAACCACCGCGGGAGGGGGGGAACGACGACGATGAGGAGAGTAGCTCCA
ACCCGTCGCTGCTTGAGCGTTCGGAGGTGGACGCCATCCTGTCGGAAGCG
GCCTCGGCGAGCGGTGGCGCCGGTGTCGAAGGCGATGCCAACCTCGACGA
TGCTGCCGCCGTTGCTGCTGGGGTGCGGGAGGGGGGCGGAGAGAGCTACA
AGACGGAGGTTGAGGACGGGCTCAGGGCGCTGATGGGAGAGATCGGCTTC
GGGCAAGAGGAAGTGGCGGCGTACAGCCTGGAAGAGCTGCTGCTGCTGAG
AGAGGAGCTCGAAAAGGAATGGGCGGCTGCGGAAACGGAGGAAGTGTCGC
CTTCCCTCAAGACGGAGAAGCGCGGAGGAGAGCTGAGACGAGCTGGATCC
GCCGAGGAAGAGGAGGAAGAGGAGGAGGAGGAAGGGGAGGAGGAGGATAG
AGATGCGGAGCCCCCTTGGGAGCGCCACTCGCTGTCGCTTCAAGAGAGGC
TGGGCTTGTCGGACGAAGAGGTGGAAAAACTCAGACGATCACCGCGATCA
GGTCTCGCTCTCAGCGGAGGCGTCCTTGATTCCTCCGATTCCAGGGGGGC
CGCGGCGGACGCGTCCCCTGGGTTGGATGCCGGCGGTAGGGGGGGCACCG
CGGATGGCGTGAAGGTATCCCCCGGGTCGGGTGTGGTTGAATACGGTCGC
GAGGCTGCCGCTGCGGCTGCGGCTGCGAGCAGGATGAAGGAGAGGCTGAC
AGGGAGATCGGCGGGAGGCCCGCAGACAGCTGTCGGCTACCTCCTGGGGG
AGCTGCGCATGAGGCCCGAAGAGGTGAAGGATGCGGTGTTGCGGTGGCCA
GCTCTCATGTCGCTCTCCAAGAGGGGCCCCCACGCGGTGACCTCGTGGCT
GCAGGGCGGGCTGGGGCTTAGCACGGACGACGTCGGTAAGATGATCAGGA
AGAACCCGGCCATCGTGGCCTGCAGCATCGTGCACAACCTGCGGCCGAAG
CTCCGGCCTTGGTCTTAG back to top
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