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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft101_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 250 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | EsV-1-7 domain protein |
| Ec32 ortholog | Ec-20_001290.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft101_11a-0001 ID=EsuBft101_11a-0001|Name=EsuBft101_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2503bp|location=Sequence derived from alignment at Scaffold_627:570357..574539+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGCTCCTTCCCCGATAATTGTCTCTCCACTCTAGTACTGCAGCTTTCCAG TTTGCTATCTCTGTCCATCTCAGCAGCATATCCACCCTCCCACGCTCCGC CACGCCCGAGCACCATCACAAGAGGATCAAGTTGGGCGAGTTTCCCGTAT GTCAGGTGGCCCCCGAGGAGCGCGATGAAAGGCCCCCGCTGTGTCGTGGA GGGCTGCGAGTCTGTCGCCAGTAGGGCCCCCCCCGGCAGCACCGCTGGGG TCGTCTGTATCCAGCACTCGCAGCCGGGGATGGTGAACTTGGTCAACTGG ACGCAGTGCTCGGGTTCGAACTGCGGGAAGTACCCTACCTACGGGGTAGA GGGGACCAGCAACCGGGAGTATTGCCGGGAGCATGCGTTGTCCGGGATGG TGGACGTGCACCGCAAGAAGTGCGCCGTCGAGAACTGCCCCACGCGAGCA TCGCACGGGGTGAAGGGCTCGGGGAAGCGGCAGTACTGTGCGATGCACGC GGCGGAAGGCATGTCGGACGTCGGGCAGAAGTTATGCCGCTTCAGCAGCC AGGAGGAAGGGGACTGCGAGTCTATCGCTCGCTACGGGGTCCGCGGCAGC AAGAAGCGGGAGTTCTGCTCCCAGCACTCTCCCGAGTGGATGGTGAACTT GAATGACAAGCTGTGTCTCTTCGGCGACTGCTCGAGGCTTCCCACGTACG GGCAGCGGGGGACCAAGGTGCGGCAGTACTGCTCTCAGCACGCTCCCTCG GGTACCGTGAACGTGACCCACAGGCTCTGCGCCGACCCGTCGTGTACGAG CCAGCCAACCTACGGGAATCCGGGGAGCCGGAAGCGGGAATTCTGCCGCC GGCACGCGCTCGAGGGGATGACCGACTTGGCTCACAAGACATGTGCCCAT GCCGAGTGCAAGAAACATCCCAAGTACGGGGTCCAGGGCAGCAACCGGCG AGAGTTCTGTTCCCGGCACGCGAAGCGAGGTATGGTGCACCTAGGGAACA AGAAGTGCATGCAGCGGGGTTGCCAGCTGCGCCCCGATCACGGCAACCCC GGGACAAAGAAGCCGGAGTTCTGCTTCCAGCACAAGAAGCAAGGTATGGT CAAGGTGGCTGACGTGGTCGCGGCAGCTTCTCTCGCGCCAGACAGCACGC AAAGTACAGAGAAGCAGGAGATGAAGCCGAACCCCTCTGAACGCCCCGTC GATCCTAAAAGGGTAAAGCGCAATCCGGATAGCATAGAATTGCCCGGTTT CTCGTTGTCAGGAGATCCACCGGCGGTTGCACCGGCAACCGGACCTCTGG ATGTGCGCGCGGTGGCCGCTACACCTGCCGTTCTCACCACGTTTGCTTCC ACTGCTGCCTCCGGAGCTTCTTCCGCTACTGCTGTTGCTGCTGCGGCGGC GGCGGCGGCCGTAGCCGCGGCACGGGGGGTGGCGATGACGACGGTTGCGG TGGGGGGGGTAGAAACGGCGGGCAGAGCTAGGGTGTTGGAAGCGGCACCA AGGGGGGCAACTGGCGATACAAAAAGTGCCATGACCTTCCAGTTTTTCCC GGGAAGCAGCGGAGGAAGCACTGAAATGACCGCAGGGCTCAGGACGGCAC AACAAGGTGGCCTCGGTGCCTCACGGGCTCGTCATGGCAGCAGTGAGGTG TCCGCTGTGCACAACGGAGGTGTTGTAGCTGGAGTCGTTGCCGATTACCA AGGCAAACACGGCGGAGGAGGCGCGCCCGCCGCTTTCAGGGGGCAAGGAG CTGATGGTACCGGGAACGTGGCCGCTTCGCATGGAGTAGCAAGAGGCGTT GTTGGTGCAACCAGTCTCGGCAACAACAGCGGATCCTCCGCGCTGCACGG GCAAGTAGGGGGCGGCGAAGCAGGAAGCAGTGCTAGCGTTTTTCCTCAGG GCGGAGGCGAAATCCCTGTTCACGGGGGGGCAATGGGAGGGGGGGTGGAA GGAGGGGGCGCTGCGGCTGCGATCGGTGTTCTCCCGTCGTCGCAGCCGCC GGGGGGGGAGGGCGGCAAAGCGATGTGCCCGGCTGCGGAAGGAGACGTGA GCGGCGGGGTTGTTGTTCCCCACAGCACAACAGGAGTGTCCGTTTGAGTG ATGAACGGTATCTAGCTGAGGTTTCCTACTTGTTCCTCTTTTCATGATCG AACGCTCCGAGCCGAGCAAGTTTTGGCGTTTTGGGTCGACTTGTAACAAA GTTTGATTGAGTGATGAGGCATGTTTTTAATTTTTTGAAAACACACAGGA AAACAGCACGTGATTTGTATCTCTGCTCCGGCGTCATGGACGACCAGGAA GTCGTGATTTTTGGGCGAGGTAATTTCGTGGCGCGACCGTGAAACTAGAC GCCATTCACTGTACTATACGCTACGCTGTCGCAGTTAAGCTTGGTGTTAA GATTGGTCAGGAAGCGAAGGGAAGGGAGCAGTGGGGATAGAAGTTGGGGG CACCTCTGCAATATGTTTGCACTCTTCGGCGCGTGTTTTGTTTTGTTTGT TTT back to topprotein sequence of EsuBft101_11a-0001 >EsuBft101_11 ID=EsuBft101_11|Name=EsuBft101_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=640bp
MKGPRCVVEGCESVASRAPPGSTAGVVCIQHSQPGMVNLVNWTQCSGSNC GKYPTYGVEGTSNREYCREHALSGMVDVHRKKCAVENCPTRASHGVKGSG KRQYCAMHAAEGMSDVGQKLCRFSSQEEGDCESIARYGVRGSKKREFCSQ HSPEWMVNLNDKLCLFGDCSRLPTYGQRGTKVRQYCSQHAPSGTVNVTHR LCADPSCTSQPTYGNPGSRKREFCRRHALEGMTDLAHKTCAHAECKKHPK YGVQGSNRREFCSRHAKRGMVHLGNKKCMQRGCQLRPDHGNPGTKKPEFC FQHKKQGMVKVADVVAAASLAPDSTQSTEKQEMKPNPSERPVDPKRVKRN PDSIELPGFSLSGDPPAVAPATGPLDVRAVAATPAVLTTFASTAASGASS ATAVAAAAAAAAVAAARGVAMTTVAVGGVETAGRARVLEAAPRGATGDTK SAMTFQFFPGSSGGSTEMTAGLRTAQQGGLGASRARHGSSEVSAVHNGGV VAGVVADYQGKHGGGGAPAAFRGQGADGTGNVAASHGVARGVVGATSLGN NSGSSALHGQVGGGEAGSSASVFPQGGGEIPVHGGAMGGGVEGGGAAAAI GVLPSSQPPGGEGGKAMCPAAEGDVSGGVVVPHSTTGVSV back to topmRNA from alignment at Scaffold_627:570357..574539+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft101_11a-0001 ID=EsuBft101_11a-0001|Name=EsuBft101_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4183bp|location=Sequence derived from alignment at Scaffold_627:570357..574539+ (Ectocarpus subulatus male Bft15b) TGCTCCTTCCCCGATAATTGTCTCTCCACTCTAGTACTGCAGCTTTCCAG
TTTGCTATCTCTGTCCATCTCAGCAGCATATCCACCCTCCCACGCTCCGC
CACGCCCGAGCACCATCACAAGAGGATCAAGTTGGGCGAGGTGAGATGCA
GCGTTGGAAGTTTGACACGCCACGTACATACGACGGCTTAACAGCGCCTT
TTTTAGCATGTTCCCGCCGCCGGTTTACAAACTACAACTGGAGAGGCCTC
CTGTGTTGTTGTCTATCGTCTACGCGTCTACACTCAGTCATCGTCGGCGG
CTTGCTTCTGGTCGCTCATTTGCCCTTTGAAGTAACCAATTGTCGAGACC
GTGTCGATCGTTTTAGTCTCTTACGTACAAGGGGTTGAAAACTTACTCCC
CGGCGGAGCCGTCTGTTCTATCGTGCATCGTGCGCGGCGGTTGACTGCTG
TACATCTAACGTTTCTCTTACAGGGGGGATTGAAGGGGGGGGCAAAAGAC
GAATATTGATTACTAGTTTTGAAAATAAATGCAAGAGCACCAGAAATTGC
ACAACAGACACACCAGACCAGGAGGAAGGTACCGCGTAAAACAGAAATCG
TTAATTCTCGCACAGGGCGGCAGTAGAGGTTCCTCAAACCGTACATTTCA
CGCCTCTACCTCCAAACGCCCCGTTTGAAATCAAGATAAAATTTCACATT
ATTCTAGATTTTAGCCACAAGAGCCAAAACGGAGGCGCTCAAACAAGGTC
AATGTTGAGTTTTAGGTGTCGCATTTGATTGACATCAGTAGAGGGCATCA
AGACGAGGCGTCGTGCTTGCTGGCACGTTCAGGTTTTCTACTGTGTACTG
GAGCTGAAATATCGAAGGTTGCAGCAGCCTCTGAAAACAGTCCGAAATCT
GCGCCGGAACCAAAAGGCATCCCACATTTGTCACAGCCGTGCTCGCTGCC
ACTGACCCCCAATCTCGTGAACTGCGGGGTTACAGCAGTAGCTGATGCCA
CTAGCTACTGCTGTCCGCAGTTCAGGGGTTTACGGTCCGTGGCGGTGAGC
ACGGCTGTGACAAATGGTGGAAGCCGTTTGGTTCCGGCGCAGATTTCGGA
CAGTTTACAGAGGCTGCTGCGACCTTCGCTATTTCAGCTCCAGTAGCAAA
CCTGAACGTGCCAGCACGCATGACGCCTCTTCATGGTGTCCTCTACAGAT
GATAATAAAATGCCTAACCTAACCCTGGCGGGACGGTTGTTTTCTTTCTT
TGTATAGTAGGGTGAAAGTATGTTGAAAAGAGCCAGCGTCACAACCCCAC
GTCTGCCCCCCCTTAAGGACAGGGTAGACCGTCTCTCTGTACACCCTAGT
GTGATAAAATAGCTTGCCAAACATTCAAATGCTGGTTGGGCCACGCACGT
GCCGGCCAGACTTGCAGCAACTTCATTTTGTTTCCAGGGACTTGCGTGCT
GCACATCCACGTTGTTATCGATGTGATTACATTTGTACGTCTCTGTCGGA
ACTGACCTGCACAGCAGTCTGCGTGTCAACATTAAACCTACTCCCGGTCG
AGTAGTCGACACAAGGCGTCATGTTGCACCCTGTTGCTGCTCCATTCTCG
GGGGTATGCGACGCCCCTCTGCCCGAGCAACCTTTGAAAGCTCGGTTGGG
ATTCGCAGATTTACGACAGAACAAAAATATATATTCTACTGTACATACTG
TAGTTCGCAATATGTACCACGCTTGAGTGTTGACTGGGACGTACATGGTA
CAGCAGCACTCGCCTATATGCCAGCTGATCCAACCGCACTCCTTTTTCCA
ACTGTGTTTTTTGGTTGCAGTTTCCCGTATGTCAGGTGGCCCCCGAGGAG
CGCGATGAAAGGCCCCCGCTGTGTCGTGGAGGGCTGCGAGTCTGTCGCCA
GTAGGGCCCCCCCCGGCAGCACCGCTGGGGTCGTCTGTATCCAGCACTCG
CAGCCGGGGATGGTGAACTTGGTCAACTGGACGCAGTGCTCGGGTTCGAA
CTGCGGGAAGTACCCTACCTACGGGGTAGAGGGGACCAGCAACCGGGAGT
ATTGCCGGGAGCATGCGTTGTCCGGGATGGTGGACGTGCACCGCAAGAAG
TGCGCCGTCGAGAACTGCCCCACGCGAGCATCGCACGGGGTGAAGGGCTC
GGGGAAGCGGCAGTACTGTGCGATGCACGCGGCGGAAGGCATGTCGGACG
TCGGGCAGAAGTTATGCCGCTTCAGCAGCCAGGAGGAAGGGGACTGCGAG
TCTATCGCTCGCTACGGGGTCCGCGGCAGCAAGAAGCGGGAGTTCTGCTC
CCAGCACTCTCCCGAGTGGATGGTGAACTTGAATGACAAGCTGTGTCTCT
TCGGCGACTGCTCGAGGCTTCCCACGTACGGGCAGCGGGGGACCAAGGTG
CGGCAGTACTGCTCTCAGCACGCTCCCTCGGGTACCGTGAACGTGACCCA
CAGGCTCTGCGCCGACCCGTCGTGTACGAGCCAGCCAACCTACGGGAATC
CGGGGAGCCGGAAGCGGGAATTCTGCCGCCGGCACGCGCTCGAGGGGATG
ACCGACTTGGCTCACAAGACATGTGCCCATGCCGAGTGCAAGAAACATCC
CAAGTACGGGGTCCAGGGCAGCAACCGGCGAGAGTTCTGTTCCCGGCACG
CGAAGCGAGGTATGGTGCACCTAGGGAACAAGAAGTGCATGCAGCGGGGT
TGCCAGCTGCGCCCCGATCACGGCAACCCCGGGACAAAGAAGCCGGAGTT
CTGCTTCCAGCACAAGAAGCAAGGTATGGTCAAGGTGGCTGACGTGGTCG
CGGCAGCTTCTCTCGCGCCAGACAGCACGCAAAGTACAGAGAAGCAGGAG
ATGAAGCCGAACCCCTCTGAACGCCCCGTCGATCCTAAAAGGGTAAAGCG
CAATCCGGATAGCATAGAATTGCCCGGTTTCTCGTTGTCAGGAGATCCAC
CGGCGGTTGCACCGGCAACCGGACCTCTGGATGTGCGCGCGGTGGCCGCT
ACACCTGCCGTTCTCACCACGTTTGCTTCCACTGCTGCCTCCGGAGCTTC
TTCCGCTACTGCTGTTGCTGCTGCGGCGGCGGCGGCGGCCGTAGCCGCGG
CACGGGGGGTGGCGATGACGACGGTTGCGGTGGGGGGGGTAGAAACGGCG
GGCAGAGCTAGGGTGTTGGAAGCGGCACCAAGGGGGGCAACTGGCGATAC
AAAAAGTGCCATGACCTTCCAGTTTTTCCCGGGAAGCAGCGGAGGAAGCA
CTGAAATGACCGCAGGGCTCAGGACGGCACAACAAGGTGGCCTCGGTGCC
TCACGGGCTCGTCATGGCAGCAGTGAGGTGTCCGCTGTGCACAACGGAGG
TGTTGTAGCTGGAGTCGTTGCCGATTACCAAGGCAAACACGGCGGAGGAG
GCGCGCCCGCCGCTTTCAGGGGGCAAGGAGCTGATGGTACCGGGAACGTG
GCCGCTTCGCATGGAGTAGCAAGAGGCGTTGTTGGTGCAACCAGTCTCGG
CAACAACAGCGGATCCTCCGCGCTGCACGGGCAAGTAGGGGGCGGCGAAG
CAGGAAGCAGTGCTAGCGTTTTTCCTCAGGGCGGAGGCGAAATCCCTGTT
CACGGGGGGGCAATGGGAGGGGGGGTGGAAGGAGGGGGCGCTGCGGCTGC
GATCGGTGTTCTCCCGTCGTCGCAGCCGCCGGGGGGGGAGGGCGGCAAAG
CGATGTGCCCGGCTGCGGAAGGAGACGTGAGCGGCGGGGTTGTTGTTCCC
CACAGCACAACAGGAGTGTCCGTTTGAGTGATGAACGGTATCTAGCTGAG
GTTTCCTACTTGTTCCTCTTTTCATGATCGAACGCTCCGAGCCGAGCAAG
TTTTGGCGTTTTGGGTCGACTTGTAACAAAGTTTGATTGAGTGATGAGGC
ATGTTTTTAATTTTTTGAAAACACACAGGAAAACAGCACGTGATTTGTAT
CTCTGCTCCGGCGTCATGGACGACCAGGAAGTCGTGATTTTTGGGCGAGG
TAATTTCGTGGCGCGACCGTGAAACTAGACGCCATTCACTGTACTATACG
CTACGCTGTCGCAGTTAAGCTTGGTGTTAAGATTGGTCAGGAAGCGAAGG
GAAGGGAGCAGTGGGGATAGAAGTTGGGGGCACCTCTGCAATATGTTTGC
ACTCTTCGGCGCGTGTTTTGTTTTGTTTGTTTT back to topCoding sequence (CDS) from alignment at Scaffold_627:570357..574539+ >EsuBft101_11a-0001 ID=EsuBft101_11a-0001|Name=EsuBft101_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1923bp|location=Sequence derived from alignment at Scaffold_627:570357..574539+ (Ectocarpus subulatus male Bft15b) ATGAAAGGCCCCCGCTGTGTCGTGGAGGGCTGCGAGTCTGTCGCCAGTAG GGCCCCCCCCGGCAGCACCGCTGGGGTCGTCTGTATCCAGCACTCGCAGC CGGGGATGGTGAACTTGGTCAACTGGACGCAGTGCTCGGGTTCGAACTGC GGGAAGTACCCTACCTACGGGGTAGAGGGGACCAGCAACCGGGAGTATTG CCGGGAGCATGCGTTGTCCGGGATGGTGGACGTGCACCGCAAGAAGTGCG CCGTCGAGAACTGCCCCACGCGAGCATCGCACGGGGTGAAGGGCTCGGGG AAGCGGCAGTACTGTGCGATGCACGCGGCGGAAGGCATGTCGGACGTCGG GCAGAAGTTATGCCGCTTCAGCAGCCAGGAGGAAGGGGACTGCGAGTCTA TCGCTCGCTACGGGGTCCGCGGCAGCAAGAAGCGGGAGTTCTGCTCCCAG CACTCTCCCGAGTGGATGGTGAACTTGAATGACAAGCTGTGTCTCTTCGG CGACTGCTCGAGGCTTCCCACGTACGGGCAGCGGGGGACCAAGGTGCGGC AGTACTGCTCTCAGCACGCTCCCTCGGGTACCGTGAACGTGACCCACAGG CTCTGCGCCGACCCGTCGTGTACGAGCCAGCCAACCTACGGGAATCCGGG GAGCCGGAAGCGGGAATTCTGCCGCCGGCACGCGCTCGAGGGGATGACCG ACTTGGCTCACAAGACATGTGCCCATGCCGAGTGCAAGAAACATCCCAAG TACGGGGTCCAGGGCAGCAACCGGCGAGAGTTCTGTTCCCGGCACGCGAA GCGAGGTATGGTGCACCTAGGGAACAAGAAGTGCATGCAGCGGGGTTGCC AGCTGCGCCCCGATCACGGCAACCCCGGGACAAAGAAGCCGGAGTTCTGC TTCCAGCACAAGAAGCAAGGTATGGTCAAGGTGGCTGACGTGGTCGCGGC AGCTTCTCTCGCGCCAGACAGCACGCAAAGTACAGAGAAGCAGGAGATGA AGCCGAACCCCTCTGAACGCCCCGTCGATCCTAAAAGGGTAAAGCGCAAT CCGGATAGCATAGAATTGCCCGGTTTCTCGTTGTCAGGAGATCCACCGGC GGTTGCACCGGCAACCGGACCTCTGGATGTGCGCGCGGTGGCCGCTACAC CTGCCGTTCTCACCACGTTTGCTTCCACTGCTGCCTCCGGAGCTTCTTCC GCTACTGCTGTTGCTGCTGCGGCGGCGGCGGCGGCCGTAGCCGCGGCACG GGGGGTGGCGATGACGACGGTTGCGGTGGGGGGGGTAGAAACGGCGGGCA GAGCTAGGGTGTTGGAAGCGGCACCAAGGGGGGCAACTGGCGATACAAAA AGTGCCATGACCTTCCAGTTTTTCCCGGGAAGCAGCGGAGGAAGCACTGA AATGACCGCAGGGCTCAGGACGGCACAACAAGGTGGCCTCGGTGCCTCAC GGGCTCGTCATGGCAGCAGTGAGGTGTCCGCTGTGCACAACGGAGGTGTT GTAGCTGGAGTCGTTGCCGATTACCAAGGCAAACACGGCGGAGGAGGCGC GCCCGCCGCTTTCAGGGGGCAAGGAGCTGATGGTACCGGGAACGTGGCCG CTTCGCATGGAGTAGCAAGAGGCGTTGTTGGTGCAACCAGTCTCGGCAAC AACAGCGGATCCTCCGCGCTGCACGGGCAAGTAGGGGGCGGCGAAGCAGG AAGCAGTGCTAGCGTTTTTCCTCAGGGCGGAGGCGAAATCCCTGTTCACG GGGGGGCAATGGGAGGGGGGGTGGAAGGAGGGGGCGCTGCGGCTGCGATC GGTGTTCTCCCGTCGTCGCAGCCGCCGGGGGGGGAGGGCGGCAAAGCGAT GTGCCCGGCTGCGGAAGGAGACGTGAGCGGCGGGGTTGTTGTTCCCCACA GCACAACAGGAGTGTCCGTTTGA back to top
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