Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1015_6 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 276 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1015_6a-0001 ID=EsuBft1015_6a-0001|Name=EsuBft1015_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2765bp|location=Sequence derived from alignment at Scaffold_544:290535..294042+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGGCCGGGACAATGGGGCTAGCGCAAGGGCACCAACCTCACGTTCG
GGACGCCGCTGAACTTCTCCAGAAAGCATTGGCCAGCGTCACCGCCCAAG
ACATCGCCAGGTGCTTTGTCGAAGCCGAGACGCTTCCGGAGGAGGTGGCG
GCTGAGCTCACCAAGCAACACGGGAAGACCCGGTTCAACGTCGCCGAGCC
TGACCTGAAGGCTCTCGCAGAGACTGTCAACATGTTGAGCACCAACGTGC
AAGGCGCGCAGAAGCAGGGATCCCGCGTCGTGGACGAGGAGATCAGCGAA
CTGTTGGCAGAACTCAACATCGAACCCGAAAAGCCGGTCGCGGGGGAAGC
GTTGGCCGCGATTCAGGGGTGGGCTACCATCGAGGACGACGAGGAGGTGG
TAGAGGCTCTTCGATTGGACGCGGTGGCAGACATGACAGCACTGCTGGCT
GGAACGAACTTGTCTACCGGCGGCGACGACGAGGAAGACGAACAGGACCA
GGGCGGTGGCGGTGAGAACACGGGGCGCGAGCGCCGTGCCCCACGTGCGC
CACCGGGTTATGAAGAACTGCCGTCTCACTTCGGCGCCCTGGAATTGGCA
GCAGAGGACAATGGCAACGGAGACGCGGCGTTCTACCGAACGAAAGCGAA
GATGTCGATGATCGCAGCGCATTCCGCTAGGCGGGAGCGCCAGACGGGCA
TTAGAGGATTCGTCGCGACGTAGAGATCATGGTTGTTTCTTTTTATTGCG
GTTCGCTTCCTGTCGTGTACTTGTAGTTTTTTTTTTTTCCGTGGAACATC
GAGGCGGGTACGCCAGGCAGACACTCCAGTGTCGCGACGTAGTTTGGGGG
CGAGATACAACTGTAGTGCAGTAGTATTGATTTTTGTTTTCTTACAGTGC
GCTTCCTGTCGTGTTTCTTTTTCTGTTTTGTCTTTTGTATCTTGCAACAT
CGAAGGAGGGGCTCTAGGGCTGAGATATAGCTACGTCAACTCTGTACGAA
CGGGAGCTTTACAAGCATCTTGCCGTCAACAGCAGTTCCGACAGTTCAGG
GTGTGCAGTACAGTGCATGTGCTGAGGCAGGCAGATAATAACGGTGCAAC
ATGCGAGTGTGAAATATTTTTCACAACTCGCCCTCTGTGTGCGACAGGGG
GGAACCATACCTGTCGCGAGAAAGGATGCCTACGCCCACGAAAGACCTTT
ACTAAGTTTGATCCATTTCGTACTCTGTTAGCCCCGCAACACATGAGCGC
CACAGCATGAAATCAAACATCGCCTCAATAGTGCCGGACCGGCTCTATTG
AGGGATATTCGAAACCTCGAAAGCGCAGAATCGGCACTATGGAGGCCCTA
TTCTGATTAGTGCCGGTGCCCTCAATAGTGACGATATCATCTCTGAACAC
ATACCGGCACTATAGCGGGCCCAGTACTGTATGTGACTTCCCCGGATCTT
CCGAGTTATTTTTTCAACTGGGCGAAGAGACCGCTGACATCATCAAGGCT
GCTGTGGAACACACGCGCTTTTCAACCACCGTCTCCCGTTCTCTACACAC
ACCTACCTACTGGCATCTCCCGCATTCACACGAGTGCACATGGCCGCATC
AACACGCCACTCCCTTTTCACACAAACAATTGCTACATAGCAGCAGACAA
ACACACATCAGGGGTCTCATCGGTGACTGCTGTAGGTGCTGGGCGTGAAC
TGGGGCTCAATCGAGAGAGGCAGACACCGTTGTCTTCACCCCGCACTGCT
GCTGCTGTGAACTGAACATGGGTATCCACATGGCATAGCTCTAGTATTAT
CACTGCTGTCCGCCCCCGGCCGAAGCAGCACACCCCGCCCGCGAGGCATG
GCACCTGCTAACGTTCCACTCAGTGCTCCTCCGTTGGGAGCGACGAGACA
TATCCACGCTGCCAACACGGGGCAACAGGGCCGCAGGCCGAACCCGAGAT
CAACACCCTTGCGGAAAGGAGGACCGTCGCGCAGCAGCACCCCGGTCTCT
GCGGGTACCATCACTCTCGCTGCCTCGAGGCGGTCGACCATTGCCAAGGC
AGCCGAGAGGAGCTCAGGAGGGGCGGTCACGACGAAGCGTTTACGGAATC
AAGTGAGTCGCGAAAGTACCACCCCGATAAGTGTATGTTGCCTGTAGCTG
GCTGGCTGGCTCTAGCCCCAACACGTATGCATCGCAGGAGAATGTCTTTC
ATGTGAGGATTCTGTACGACATCGAAATAGTCTCGTGCATGTTGTTCGCG
TCTTCGTGCGTTCCAACATGTGGACATGTAGAGAAAAATACATGTATATG
CTTACGCCCCTTGTCTATTTACTGTAGAACTCTTTTTTCATCTTGCTACA
AGAGGAAGCCTACATTTATTTGTGTAGTACATGCTCGAAATCATCACATC
CTGCATGTTGTGACGGGTGCAAGAGTGCCCATGGCAGCTGCTAGAGAATG
CGAGCTGCGAGAGCGAAGTCATGACCACACGAAGTGAAAAGGAGAGAGGG
ACAAGCGACGCTTCGTTCGACACGAGCATTCAGATGAATGCAAAGGGTCG
CGGCGTGCAGATCACGAGGAGCGACTGCTTCACGCAGGCGTGCCGCCAGT
GTGGGCGGGAAATAAACCCGTGCCAGCGGCCATTGCAGACGCATTCCTGT
CGTGATATTTGGTGGTGTGTGATAGGCTGTTCATGGGGCGTGAGGGATGG
GGTGTGTGCTGGACGACTTCTTACTCACGAGGATTTGGAAGAATTGCGCG
TCGATATCCATGAAC back to topprotein sequence of EsuBft1015_6a-0001 >EsuBft1015_6 ID=EsuBft1015_6|Name=EsuBft1015_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=240bp
MKAGTMGLAQGHQPHVRDAAELLQKALASVTAQDIARCFVEAETLPEEVA
AELTKQHGKTRFNVAEPDLKALAETVNMLSTNVQGAQKQGSRVVDEEISE
LLAELNIEPEKPVAGEALAAIQGWATIEDDEEVVEALRLDAVADMTALLA
GTNLSTGGDDEEDEQDQGGGGENTGRERRAPRAPPGYEELPSHFGALELA
AEDNGNGDAAFYRTKAKMSMIAAHSARRERQTGIRGFVAT back to topmRNA from alignment at Scaffold_544:290535..294042+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1015_6a-0001 ID=EsuBft1015_6a-0001|Name=EsuBft1015_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3508bp|location=Sequence derived from alignment at Scaffold_544:290535..294042+ (Ectocarpus subulatus male Bft15b)
ATGAAGGCCGGGACAATGGGGCTAGCGCAAGGGCACCAACCTCACGTTCG
GGACGCCGCTGAACTTCTCCAGAAAGCATTGGCCAGCGTCACCGCCCAAG
ACATCGCCAGGTGAGTTTTGAACATGTGATATCGCTGTTTTAAATGTGTA
GCTCGCGCAAGTGCGCATTGCTTTGGTGGTACGTTACGTGGGTAAGGTTG
TACGGATAGGTTTTTTTTTCGACTGAATATTCCCCCAACTGCAAATCTGC
TTGTTTCTTTGCTAAAAAAAGGCGCTCTCTCGCATCCCTATGAGTCATTG
TCACTGGGTTCGTCAAACACCGCTCCTCCACCCAAACACGGATGCATCAC
AATTTCTGCGCTACCTGGCCAGGTGCTTTGTCGAAGCCGAGACGCTTCCG
GAGGAGGTGGCGGCTGAGCTCACCAAGCAACACGGGAAGACCCGGTTCAA
CGTCGCCGAGCCTGACCTGAAGGCTCTCGCAGAGACTGTCAACATGTTGA
GCACCAACGTGCAAGGCGCGCAGAAGCAGGGATCCCGCGTCGTGGACGAG
GAGATCAGCGAACTGTTGGCAGAACTCAACATCGAACCCGAAAAGCCGGT
CGCGGGGGAAGCGTTGGCCGCGATTCAGGGGTGGGCTACCATCGAGGACG
ACGAGGAGGTGGTAGAGGCTCTTCGATTGGACGCGGTGGCAGACATGACA
GCACTGCTGGCTGGAACGAACTTGTCTACCGGCGGCGACGACGAGGAAGA
CGAACAGGACCAGGGCGGTGGCGGTGAGAACACGGGGCGCGAGCGCCGTG
CCCCACGTGCGCCACCGGGTTATGAAGAACTGCCGTCTCACTTCGGCGCC
CTGGAATTGGCAGCAGAGGACAATGGCAACGGAGACGCGGCGTTCTACCG
AACGAAAGCGAAGATGTCGATGATCGCAGCGCATTCCGCTAGGCGGGAGC
GCCAGACGGGCATTAGAGGATTCGTCGCGACGTAGAGATCATGGTTGTTT
CTTTTTATTGCGGTTCGCTTCCTGTCGTGTACTTGTAGTTTTTTTTTTTT
CCGTGGAACATCGAGGCGGGTACGCCAGGCAGACACTCCAGTGTCGCGAC
GTAGTTTGGGGGCGAGATACAACTGTAGTGCAGTAGTATTGATTTTTGTT
TTCTTACAGTGCGCTTCCTGTCGTGTTTCTTTTTCTGTTTTGTCTTTTGT
ATCTTGCAACATCGAAGGAGGGGCTCTAGGGCTGAGATATAGCTACGTCA
ACTCTGTACGAACGGGAGCTTTACAAGCATCTTGCCGTCAACAGCAGTTC
CGACAGTTCAGGGTGTGCAGTACAGTGCATGTGCTGAGGCAGGCAGATAA
TAACGGTGCAACATGCGAGTGTGAAATATTTTTCACAACTCGCCCTCTGT
GTGCGACAGGGGGGAACCATACCTGTCGCGAGAAAGGATGCCTACGCCCA
CGAAAGACCTTTACTAAGTTTGATCCATTTCGTACTCTGTTAGCCCCGCA
ACACATGAGCGCCACAGCATGAAATCAAACATCGCCTCAATAGTGCCGGA
CCGGCTCTATTGAGGGATATTCGAAACCTCGAAAGCGCAGAATCGGCACT
ATGGAGGCCCTATTCTGATTAGTGCCGGTGCCCTCAATAGTGACGATATC
ATCTCTGAACACATACCGGCACTATAGCGGGCCCAGTACTGTATGTGACT
TCCCCGGATCTTCCGAGTTATTTTTTCAACTGGGCGAAGAGACCGCTGAC
ATCATCAAGGCTGCTGTGGAACACACGCGCTTTTCAACCACCGTCTCCCG
TTCTCTACACACACCTACCTACTGGCATCTCCCGCATTCACACGAGTGCA
CATGGCCGCATCAACACGCCACTCCCTTTTCACACAAACAATTGCTACAT
AGCAGCAGACAAACACACATCAGGGGTCTCATCGGTGACTGCTGTAGGTG
CTGGGCGTGAACTGGGGCTCAATCGAGAGAGGCAGACACCGTTGTCTTCA
CCCCGCACTGCTGCTGCTGTGAACTGAACATGGGTATCCACATGGCATAG
CTCTAGTATTATCACTGCTGTCCGCCCCCGGCCGAAGCAGCACACCCCGC
CCGCGAGGCATGGCACCTGCTAACGTTCCACTCAGTGCTCCTCCGTTGGG
AGCGACGAGACATATCCACGCTGCCAACACGGGGCAACAGGGCCGCAGGC
CGAACCCGAGATCAACACCCTTGCGGAAAGGAGGACCGTCGCGCAGCAGC
ACCCCGGTCTCTGCGGGTACCATCACTCTCGCTGCCTCGAGGCGGTCGAC
CATTGCCAAGGCAGCCGAGAGGAGCTCAGGAGGGGCGGTCACGACGAAGC
GTTTACGGAATCAAGTGAGTCGCGAAAGTACCACCCCGATAAGTGTATGT
TGCCTGTAGCTGGCTGGCTGGCTCTAGCCCCAACACGTATGCATCGCAGG
AGAATGTCTTTCATGTGAGGATTCTGTACGACATCGAAATAGTCTCGTGC
ATGTTGTTCGCGTCTTCGTGCGTTCCAACATGTGGACATGTAGAGAAAAA
TACATGTATATGCTTACGCCCCTTGTCTATTTACTGTAGAACTCTTTTTT
CATCTTGCTACAAGAGGAAGCCTACATTTATTTGTGTAGTACATGCTCGA
AATCATCACATCCTGCATGTTGTGACGGGTGCAAGAGTGCCCATGGCAGC
TGCTAGAGAATGCGAGGTACTTGGTCGCGGAAGAACGGCGATACACACGT
GAGCAGTGTTTCATTTGTGTGCACTAGAAGGTTAATGTATGTAAAATTCG
AACTTCAATGGCGACATGCGGTATGGCGTGGATCAAGGCAGCTGCGAGAG
CGAAGTCATGACCACACGAAGTGAAAAGGAGAGAGGGACAAGCGACGTCG
GCGATTCCACCCCCAACCCTAATAGAATGCTCCAGCAGTGCTGTCGAAAC
ACATACATATGGTGCGCAACACGTCGATACCCCGGGGCATGCCGAGAGAT
AGGGTGGTATCTCCTGTATCATGGAACGGGGAGAGTCCGTCGAAGGCAGA
AAAGGAGTAACCCCGTTGTCGAGGGACCGAAAATATCCTTCATGTAGTTC
GAAAGGAGGAACGTCCACATTGCGTGTACGCGTCCGTCCCTCACAGGCTA
CTGAAGCTATCGTTCGTTAGCTCTCGATTCTTCCCCAACGAACTGGAGTA
CACTCTGAAACCGACAACCGACATCCATGTTTTTCCTGCCCACGATGTGC
AGGCTTCGTTCGACACGAGCATTCAGATGAATGCAAAGGGTCGCGGCGTG
CAGATCACGAGGAGCGACTGCTTCACGCAGGCGTGCCGCCAGTGTGGGCG
GGAAATAAACCCGTGCCAGCGGCCATTGCAGACGCATTCCTGTCGTGATA
TTTGGTGGTGTGTGATAGGCTGTTCATGGGGCGTGAGGGATGGGGTGTGT
GCTGGACGACTTCTTACTCACGAGGATTTGGAAGAATTGCGCGTCGATAT
CCATGAAC back to topCoding sequence (CDS) from alignment at Scaffold_544:290535..294042+ >EsuBft1015_6a-0001 ID=EsuBft1015_6a-0001|Name=EsuBft1015_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=723bp|location=Sequence derived from alignment at Scaffold_544:290535..294042+ (Ectocarpus subulatus male Bft15b)
ATGAAGGCCGGGACAATGGGGCTAGCGCAAGGGCACCAACCTCACGTTCG
GGACGCCGCTGAACTTCTCCAGAAAGCATTGGCCAGCGTCACCGCCCAAG
ACATCGCCAGGTGCTTTGTCGAAGCCGAGACGCTTCCGGAGGAGGTGGCG
GCTGAGCTCACCAAGCAACACGGGAAGACCCGGTTCAACGTCGCCGAGCC
TGACCTGAAGGCTCTCGCAGAGACTGTCAACATGTTGAGCACCAACGTGC
AAGGCGCGCAGAAGCAGGGATCCCGCGTCGTGGACGAGGAGATCAGCGAA
CTGTTGGCAGAACTCAACATCGAACCCGAAAAGCCGGTCGCGGGGGAAGC
GTTGGCCGCGATTCAGGGGTGGGCTACCATCGAGGACGACGAGGAGGTGG
TAGAGGCTCTTCGATTGGACGCGGTGGCAGACATGACAGCACTGCTGGCT
GGAACGAACTTGTCTACCGGCGGCGACGACGAGGAAGACGAACAGGACCA
GGGCGGTGGCGGTGAGAACACGGGGCGCGAGCGCCGTGCCCCACGTGCGC
CACCGGGTTATGAAGAACTGCCGTCTCACTTCGGCGCCCTGGAATTGGCA
GCAGAGGACAATGGCAACGGAGACGCGGCGTTCTACCGAACGAAAGCGAA
GATGTCGATGATCGCAGCGCATTCCGCTAGGCGGGAGCGCCAGACGGGCA
TTAGAGGATTCGTCGCGACGTAG back to top
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