Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FI08 |
| ProteomeId | EsuBft1011_5 |
| Protein domains | IPR007087 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 138 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.72e-169 |
| EggNOG OGs | 2DCSR@1|root,2S5KN@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0046872 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1011_5a-0001 ID=EsuBft1011_5a-0001|Name=EsuBft1011_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1389bp|location=Sequence derived from alignment at Scaffold_644:350564..353161- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTACAAGACCCCATCTTCTAAGCACCCACCTGCCGCTGCAGCGGCTAC
CGCGAAGAGAAAGGTCGTGGATCGAGGGAAGCAAGCCAGGGAGAGAGCTG
CCAAACGCACTTTAGGCGGCAACATCTGTAACGCGTTCGCGATTGGCAGC
GGACAACCGGTTGAGCGGACTCGCGGTGGAGTGAAAGAGCTCATATCCGG
TATCAGCTTCTCACCTCCGGCTCCGGAGTCCCGACGACCTTGCCCTCACT
GTCCCATGACCTGCGTGAACGAGCAAGGCCTTGGGATCCACGTGAGAACG
CAGCATAGCAGTGCAAACATGTCCAACGGCGCGCAGCTGCGGCGCCTGCT
ACGGAAGGACCTCGAAAGGAGTGTCTTGTCGTGGGAAGCAGCCGGGCCAG
GGCGTTGTTGGCTCGTGAAGGTCGATGATGCGACGGGGGCGGCTTCGTTT
GTCCTCCAGCGGAAGCGCTTTCTCGATCTCGACTTGGATAGCGACGGCTT
TATGGACCGCAAACCCAAGGAAACTCGTGGAGCTCCCAAGAGCAGGCGAT
ACGACTTCAGGTTCAAAGCTCATGCTGTAAACCAGATGGCGATACGACTG
TTTCGCAATCTCCTGCAAGAGCCGGTGCGGTACAGGGCGCCCGACGAATC
GGACGTGTCGGCGATTACGACGGTCGTGGAGAGAGAGTCGAGAGTTCCCA
AGTGCGGTCAATTGCAGCCCTGGGAGCGTTGGAATGTGGATCACGTGCCT
TTGGCATTCGTAAACGGGCTGATCGACACGTGGGACAAGAGAGGTGCGTT
GCGGGTAGCAATCTCGCAGCCCTTTCCTGGCCTAGAGCAAAGGCAGTGCA
CCATGCAAATCATCTTTGGTCCGGCGGTGAAGAAAGCCGCGTACCACGAG
GACGTGGACGTGCTTTTCCAGGAGAATGCGTGGGCCGACCAAAAATTCTG
CATAGACTGGGCGAAGAGGTCCTACCGCGAAGGCCTGATGAGCAGGGGGG
GTGAGCTCCCCAAGGCGAGGTCCATTCTTATCATGGACTATTTGAACGCG
CAGACGACGGACGAGGTGCAACCAGTTGGTGCAGGAGCCGAGCGATTTCT
CAAGGAGGGTCTGGACAAGCCGTACACCTTCGCAAACGATGAAGACAATA
GTGAAGACGAACAAGGTTCGGAGAACGGCAGCGATGAGCCTGAGGGGCGG
GGGGAGGAGGACGATGGAGGACGTGAGACGGTCGTGGAGGGCGCTAACTC
CAGCGTTGAAGACGACGGCGAAGGACACTCGCCTCTGTACGGCTACTGTG
TACAGGTGGAGCTAGACCAGAGTACGCGCAAGACGAAGTTGCCCTTAGAC
AAGTACAGCGGAGATCCGGATGCGGCTGTAGGCTCCTAG back to topprotein sequence of EsuBft1011_5a-0001 >EsuBft1011_5 ID=EsuBft1011_5|Name=EsuBft1011_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=462bp
MYKTPSSKHPPAAAAATAKRKVVDRGKQARERAAKRTLGGNICNAFAIGS
GQPVERTRGGVKELISGISFSPPAPESRRPCPHCPMTCVNEQGLGIHVRT
QHSSANMSNGAQLRRLLRKDLERSVLSWEAAGPGRCWLVKVDDATGAASF
VLQRKRFLDLDLDSDGFMDRKPKETRGAPKSRRYDFRFKAHAVNQMAIRL
FRNLLQEPVRYRAPDESDVSAITTVVERESRVPKCGQLQPWERWNVDHVP
LAFVNGLIDTWDKRGALRVAISQPFPGLEQRQCTMQIIFGPAVKKAAYHE
DVDVLFQENAWADQKFCIDWAKRSYREGLMSRGGELPKARSILIMDYLNA
QTTDEVQPVGAGAERFLKEGLDKPYTFANDEDNSEDEQGSENGSDEPEGR
GEEDDGGRETVVEGANSSVEDDGEGHSPLYGYCVQVELDQSTRKTKLPLD
KYSGDPDAAVGS back to topmRNA from alignment at Scaffold_644:350564..353161- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1011_5a-0001 ID=EsuBft1011_5a-0001|Name=EsuBft1011_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2598bp|location=Sequence derived from alignment at Scaffold_644:350564..353161- (Ectocarpus subulatus male Bft15b)
ATGTACAAGACCCCATCTTCTAAGCACCCACCTGCCGCTGCAGCGGCTAC
CGCGAAGAGAAAGGTCGTGGATCGAGGGAAGCAAGCCAGGGAGAGAGCTG
CCAAACGCACTTTAGGCGGCAACATCTGTAACGCGTTCGCGATTGGCAGC
GGACAACCGGTGAGTTCGTTTATCTGACGCACGCAAATGATTTGTTCGCT
ACACAAGTGTTGGTAGATTTAATAAGAACTCCCATGAAAACGATGGCAAC
AAATAAACTTCGTTCGTGTGTAGTCTACATGTATGTATGTTGTGAAATCT
TGTGCTCAGTCCATCCCATAGCGTGTGCATAAATAGAAAATAGTATGTAG
TGTAGATATTCTAGGTTGAACGTCGGCGACCTAATTTTGAGTATGCACTG
TACACTCTTACTTGGCGCAACATACAGTGCACGTTCTCCGCTTGATAGTT
TAGTTTTAATGTGACACAAAGAAGAATTATCTCCACTCTCTCGTGTGGTT
CACGATAATCTATCCACGGAGTATTGTGTAGGGAGTACATAGGCATCTTT
TGCCAGCGACATCCACGGAAGTTTGAGGTCGGCAGCGCCACACTCAAAAG
CGAATGACACATCACATGGCTCGTTGAATCACCTACACGGCAATTCCGCC
CGTCGTCCACCGTGCTGCGCAGGTTGAGCGGACTCGCGGTGGAGTGAAAG
AGCTCATATCCGGTATCAGCTTCTCACCTCCGGCTCCGGAGTCCCGACGA
CCTTGCCCTCACTGTCCCATGACCTGCGTGAACGAGCAAGGCCTTGGGAT
CCACGTGAGAACGCAGCATAGCAGTGCAAACATGTCCAACGGCGCGCAGC
TGCGGCGCCTGCTACGGAAGGACCTCGAAAGGAGTGTCTTGTCGTGGGAA
GCAGCCGGGCCAGGGCGTTGTTGGCTCGTGAAGGTCGATGATGCGACGGG
GGCGGCTTCGTTTGTCCTCCAGCGGAAGCGCTTTCTCGATCTCGACTTGG
ATAGCGACGGCTTTATGGACCGCAAACCCAAGGAAACTCGTGGAGCTCCC
AAGAGCAGGCGATACGACTTCAGGTTCAAAGCTCATGCTGTAAACCAGAT
GGCGATACGACTGTTTCGCAATCTCCTGCAAGAGCCGGTGCGGTACAGGG
CGCCCGACGAATCGGACGTGTCGGCGATTACGACGGTCGTGGAGAGAGAG
TCGAGAGTTCCCAAGTGCGGTCAATTGCAGCCCTGGGAGCGTTGGAATGT
GGATCACGTGCCTTTGGCATTCGTAAACGGGCTGATCGACACGTGGGACA
AGAGAGGTGCGTTGCGGGTAGCAATCTCGCAGCCCTTTCCTGGCCTAGAG
CAAAGGCAGTGCACCATGCAAATCATCTTTGGTCCGGGTGAGAAGACCAT
GCGATTTTCGGTGATTTTCCGAGGCACGGGAAAGCGGTGAAGAAAGCCGC
GTACCACGAGGACGTGGACGTGCTTTTCCAGGAGAATGCGTGGGCCGACC
AAAAATTCTGCATAGACTGGGCGAAGAGGTCCTACCGCGAAGGCCTGATG
AGCAGGGGGGGTGAGCTCCCCAAGGCGAGGTCCATTCTTATCATGGACTA
TTTGAACGCGCAGACGACGGACGAGGTGCAACCAGTTGGTGCAGGAGCCG
AGCGATTTCTCAAGGTGAAAGTTGGGACGCAGATGGACATATGGCTCGAG
CGATGGATAATCTCGAGAGGTGGGAAACCGCGTCGCTGAAAGCTTCTGAC
AGGCGGGTACTGATCACTCAGTGGATGGGAGCGGCCACGGCAAGACTCAA
CAGTCAACAGGCGTTCCGATACCGCCTTTTCGAAAAGTGCGGGATGGCCA
TGACCGTGGACGGCTCAGGCGATGATCGAATTACCTAGGAGGGTCTGGAC
AAGCCGTACACCTTCGCAAACGATGAAGACAATAGTGAAGACGAACAAGG
TTCGGAGAACGGCAGCGATGAGCCTGAGGGGCGGGGGGAGGAGGACGATG
GAGGACGTGAGACGGTCGTGGAGGGCGCTAACTCCAGCGTTGAAGACGAC
GGCGGTAAGTTTGTTTTGCACTAGACCCACTCTGTACCATTCCCTTTTTT
GATGACGATGTCCTTCATGTTGATGTTCGCTTGTGTTTTTGCTGATGTAC
TGTTTCCGCGCACGACCACGAACAAATGGTGATACAATAGCTTCATGTTG
AGATATGGCGACGTGACACCCTAACTTCTTGTCGCGTTTCCCGGTGCCTC
GTTCGCAGATAAGTCTCAACCCCAGACCGACGAGCTAGCTCTTCTGGACG
ACGACGACAGCATGGACCCACCAGACCCGGAGGACGAGATACAGGGAATG
GGGACCCCGGCAGGCTTTCGTATTCAAGAAGCTAAACCCGTTGCTCTTGA
CAGATTGCTTTTACGACGTGGAGTGCTCGTTAGGCTGGGGATGGGGTGGT
TTGGTGGTTTCATCACTCAACAATCTCAGAAGGACACTCGCCTCTGTACG
GCTACTGTGTACAGGTGGAGCTAGACCAGAGTACGCGCAAGACGAAGTTG
CCCTTAGACAAGTACAGCGGAGATCCGGATGCGGCTGTAGGCTCCTAG back to topCoding sequence (CDS) from alignment at Scaffold_644:350564..353161- >EsuBft1011_5a-0001 ID=EsuBft1011_5a-0001|Name=EsuBft1011_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1389bp|location=Sequence derived from alignment at Scaffold_644:350564..353161- (Ectocarpus subulatus male Bft15b)
ATGTACAAGACCCCATCTTCTAAGCACCCACCTGCCGCTGCAGCGGCTAC
CGCGAAGAGAAAGGTCGTGGATCGAGGGAAGCAAGCCAGGGAGAGAGCTG
CCAAACGCACTTTAGGCGGCAACATCTGTAACGCGTTCGCGATTGGCAGC
GGACAACCGGTTGAGCGGACTCGCGGTGGAGTGAAAGAGCTCATATCCGG
TATCAGCTTCTCACCTCCGGCTCCGGAGTCCCGACGACCTTGCCCTCACT
GTCCCATGACCTGCGTGAACGAGCAAGGCCTTGGGATCCACGTGAGAACG
CAGCATAGCAGTGCAAACATGTCCAACGGCGCGCAGCTGCGGCGCCTGCT
ACGGAAGGACCTCGAAAGGAGTGTCTTGTCGTGGGAAGCAGCCGGGCCAG
GGCGTTGTTGGCTCGTGAAGGTCGATGATGCGACGGGGGCGGCTTCGTTT
GTCCTCCAGCGGAAGCGCTTTCTCGATCTCGACTTGGATAGCGACGGCTT
TATGGACCGCAAACCCAAGGAAACTCGTGGAGCTCCCAAGAGCAGGCGAT
ACGACTTCAGGTTCAAAGCTCATGCTGTAAACCAGATGGCGATACGACTG
TTTCGCAATCTCCTGCAAGAGCCGGTGCGGTACAGGGCGCCCGACGAATC
GGACGTGTCGGCGATTACGACGGTCGTGGAGAGAGAGTCGAGAGTTCCCA
AGTGCGGTCAATTGCAGCCCTGGGAGCGTTGGAATGTGGATCACGTGCCT
TTGGCATTCGTAAACGGGCTGATCGACACGTGGGACAAGAGAGGTGCGTT
GCGGGTAGCAATCTCGCAGCCCTTTCCTGGCCTAGAGCAAAGGCAGTGCA
CCATGCAAATCATCTTTGGTCCGGCGGTGAAGAAAGCCGCGTACCACGAG
GACGTGGACGTGCTTTTCCAGGAGAATGCGTGGGCCGACCAAAAATTCTG
CATAGACTGGGCGAAGAGGTCCTACCGCGAAGGCCTGATGAGCAGGGGGG
GTGAGCTCCCCAAGGCGAGGTCCATTCTTATCATGGACTATTTGAACGCG
CAGACGACGGACGAGGTGCAACCAGTTGGTGCAGGAGCCGAGCGATTTCT
CAAGGAGGGTCTGGACAAGCCGTACACCTTCGCAAACGATGAAGACAATA
GTGAAGACGAACAAGGTTCGGAGAACGGCAGCGATGAGCCTGAGGGGCGG
GGGGAGGAGGACGATGGAGGACGTGAGACGGTCGTGGAGGGCGCTAACTC
CAGCGTTGAAGACGACGGCGAAGGACACTCGCCTCTGTACGGCTACTGTG
TACAGGTGGAGCTAGACCAGAGTACGCGCAAGACGAAGTTGCCCTTAGAC
AAGTACAGCGGAGATCCGGATGCGGCTGTAGGCTCCTAG back to top
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