Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FGX3 |
| ProteomeId | EsuBft1009_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 16 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Evalue | 7.36e-19 |
| EggNOG OGs | COG0508@1|root,KOG0557@2759|Eukaryota |
| Ec32 ortholog description | Single hybrid motif |
| Ec32 ortholog | Ec-11_000970.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | dihydrolipoyllysine-residue acetyltransferase activity |
| COG category | C |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1009_4a-0001 ID=EsuBft1009_4a-0001|Name=EsuBft1009_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=165bp|location=Sequence derived from alignment at Scaffold_106:151993..152278- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCACGATCCTCCGCAGGCGAATCATCTACGTTGATGTCCCTGGCTAG
AAATAAGGATAGCGAGCTTCTGAAGGCTTTCGAGGGTTGCTTCGAGGGTG
ACGAGTACAAGGGCGACATCGATGACGACTTGTTCCTTGCGCAGGCGGCT
GAAACGAGCGGTTGA back to topprotein sequence of EsuBft1009_4a-0001 >EsuBft1009_4 ID=EsuBft1009_4|Name=EsuBft1009_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=54bp
MPRSSAGESSTLMSLARNKDSELLKAFEGCFEGDEYKGDIDDDLFLAQAA
ETSG back to topmRNA from alignment at Scaffold_106:151993..152278- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1009_4a-0001 ID=EsuBft1009_4a-0001|Name=EsuBft1009_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=286bp|location=Sequence derived from alignment at Scaffold_106:151993..152278- (Ectocarpus subulatus male Bft15b)
ATGCCACGATCCTCCGCAGGCGAATCATCTACGTTGATGTCCCTGGCTAG
AAATAAGGATAGCGAGCTTCTGAAGGCTTTCGAGGGTTGCTTCGAGGGTG
ACGAGTACAAGGGCGACATCGATGACGACTTGTTCCTTGCGCAGGTGAAT
TCGGCGATGTTCAGACACCGTTCCAGACCTAACCGTTCGCGTTCCCGATG
CCTTGTTCAAGCGTATGTTCACTGTTGCTGAAGCAGTTCGTTGTGCTAAG
GCTGGCTTTGACTAGGCGGCTGAAACGAGCGGTTGA back to topCoding sequence (CDS) from alignment at Scaffold_106:151993..152278- >EsuBft1009_4a-0001 ID=EsuBft1009_4a-0001|Name=EsuBft1009_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=165bp|location=Sequence derived from alignment at Scaffold_106:151993..152278- (Ectocarpus subulatus male Bft15b)
ATGCCACGATCCTCCGCAGGCGAATCATCTACGTTGATGTCCCTGGCTAG
AAATAAGGATAGCGAGCTTCTGAAGGCTTTCGAGGGTTGCTTCGAGGGTG
ACGAGTACAAGGGCGACATCGATGACGACTTGTTCCTTGCGCAGGCGGCT
GAAACGAGCGGTTGA back to top
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