prot_Ecto-sp9_F_contig10485.458.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10485.458.1
Unique Nameprot_Ecto-sp9_F_contig10485.458.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length449
Homology
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 518 bits (1335), Expect = 1.100e-176
Identity = 380/463 (82.07%), Postives = 382/463 (82.51%), Query Frame = 0
Query:    1 MSWRSHLDNRLASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------QQRTALGTRTTNARVSTPGRPAGSGVGGGERRPVSGGRRRLATATAYPAVGES-GGXXXXSCSGSSGVPYPRPASGSLRPSSSSRNPYDARDHAGRSSAAXXXXXXXXSRRWTARGEYEG---RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGVADDGGGGPAPVGAAAKERDSYAQLGGRQSERPLSATAAAAVA-LAAAPAIRTAAADWLSAGEDDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKSSGGDMFGLGEAALGGPAHGRRGGAAAAVRGAPGRGLLEGGGVYGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGERAGDALP 448
            MSWRSHLDNRLASGXXXXXXXXX                 XXXXXXXXXXXXXXXXXXXX                Q RTALGTRTTNAR      PAGSGVG GERRPVSGG RRL T+TAYPAVGES GGXXXX CSGSSGVPYPRPASGSLRP SSSRNPYDARDHAGRSSAA        SRRWTARGEYEG          XXXXXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGV DDG  GPAPVGAA KERDSYA LGGRQSERPLSATAAAA A LAAAPAIRT AADWLSAGEDDYRGG AVWRDWTAPAPAVGAAPEAAGA SAPGSFRSGAAATK SGGDMFGLGEAALGGPAHGRRG A AA RGAPGRGLLEGGGVYGTG XXX APRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVG+LEQRLTLTEDRLQQGERAGDA P
Sbjct:  202 MSWRSHLDNRLASGXXXXXXXXXSVRAPAGFGEGAILVGEXXXXXXXXXXXXXXXXXXXXVKGVARRGGVAGLGGGQLRTALGTRTTNAR------PAGSGVGEGERRPVSGGGRRLETSTAYPAVGESSGGXXXXXCSGSSGVPYPRPASGSLRPPSSSRNPYDARDHAGRSSAAAGEAAAAASRRWTARGEYEGWGKHQPPLPPXXXXXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGVVDDGPEGPAPVGAAEKERDSYALLGGRQSERPLSATAAAATAALAAAPAIRTGAADWLSAGEDDYRGGAAVWRDWTAPAPAVGAAPEAAGAFSAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGEAGAAARGAPGRGLLEGGGVYGTGGXXXGAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGLLEQRLTLTEDRLQQGERAGDASP 658          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: Lissencephaly (protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 4.650e-136
Identity = 298/453 (65.78%), Postives = 298/453 (65.78%), Query Frame = 0
Query:    1 MSWRSHLDNRLAS----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRTALGTRTTNARVSTPGRPAGSGVGGGERRPVSGGRRRLATATAYPAVGESGGXXXXSCSGSSGVPYPRPASGSLRPSSSSRNPYDARDHAGRSSAAXXXXXXXXSRRWTARGEYEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSFGVEDLEEDGVADDGGGGPAPVGAAAKERDSYAQLGGRQSERPLSATAAA-AVALAAAPAIRTAAADWLSAGEDDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKSSGGDMFGLGEAALGGPAHGRRGGAAAAVRGAPGRGLLEGGGVYGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGERAGDALP 448
            MSWRSHLDNRLAS     XXXXXXXXXX            XXXXXXXXXXXXXX                Q RTALGTRTTNARVSTPGRPAGSGVGGGERRPVSGGRRRL TATAYPA                                                                                                             DLEEDGVADDG GGPAPVGAAAKERDSY  LGGRQSERPLSATAAA A ALAAAPAIRTAAADWLSAGEDDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATK SGGDMFGLGEAALGGPAHGRRGGAAAAVRGAPGRGLLEGGGV GTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGER  D  P
Sbjct:  333 MSWRSHLDNRLASVGXXXXXXXXXXXXXVRAPTGFEEGAIXXXXXXXXXXXXXXVKGVARRGGLAGSGGGQPRTALGTRTTNARVSTPGRPAGSGVGGGERRPVSGGRRRLETATAYPA-------------------------------------------------------------------------------------------------------------DLEEDGVADDGVGGPAPVGAAAKERDSYELLGGRQSERPLSATAAAGAAALAAAPAIRTAAADWLSAGEDDYRGGGAVWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKFSGGDMFGLGEAALGGPAHGRRGGAAAAVRGAPGRGLLEGGGVCGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGERVADTSP 676          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CER6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.390e-8
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  374 LEGGGVYGTGXXXXXAPRRSLEVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRL 437
            +EGGG +         P +   + R  LPE L  TLDHIVGQLD++TRT+ +LEQR++LTEDRL
Sbjct:   46 MEGGGSH----LPAPLPSQRGVISRDMLPEVLTATLDHIVGQLDVVTRTMSILEQRVSLTEDRL 105          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein homolog A-like isoform X4 n=1 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659BF5B)

HSP 1 Score: 61.2 bits (147), Expect = 2.480e-8
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  400 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   31 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQ 70          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein homolog A-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B7EE92)

HSP 1 Score: 60.8 bits (146), Expect = 2.900e-8
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  400 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            ++P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L++
Sbjct:   27 SVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLKE 66          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein A n=1 Tax=Myotis myotis TaxID=51298 RepID=A0A7J7UDW8_MYOMY)

HSP 1 Score: 60.5 bits (145), Expect = 4.170e-8
Identity = 28/38 (73.68%), Postives = 35/38 (92.11%), Query Frame = 0
Query:  402 PEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            P+AL  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   29 PQALTSTLEHIVGQLDVLTQTVCILEQRLTLTEDKLKQ 66          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein homolog A-like isoform X3 n=1 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659089B)

HSP 1 Score: 61.2 bits (147), Expect = 6.610e-8
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  400 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   70 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQ 109          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein homolog A-like isoform X1 n=2 Tax=Halichoerus grypus TaxID=9711 RepID=UPI001659BC96)

HSP 1 Score: 61.2 bits (147), Expect = 6.930e-8
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  400 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            ++P+ L  TL+HIVGQLD+LT+TV +LEQRLTLTED+L+Q
Sbjct:   72 SMPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQ 111          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein homolog A n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B952DC)

HSP 1 Score: 60.8 bits (146), Expect = 7.620e-8
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  400 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            ++P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L++
Sbjct:   65 SVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLKE 104          
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Match: POC1 (centriolar protein A n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6DXY8_LATCA)

HSP 1 Score: 63.9 bits (154), Expect = 8.220e-8
Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = 0
Query:  399 GALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQ 439
            G +P  LAGTL+HI+GQLD+LT+TV +LEQRLTLTED+L++
Sbjct:  198 GGVPPGLAGTLEHIIGQLDILTQTVSILEQRLTLTEDKLKE 238          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10485.458.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.100e-17682.07protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Lissencephaly4.650e-13665.78protein 1-like n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Hypothetical1.390e-851.56protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
POC12.480e-867.50centriolar protein homolog A-like isoform X4 n=1 T... [more]
POC12.900e-870.00centriolar protein homolog A-like n=1 Tax=Sinocycl... [more]
POC14.170e-873.68centriolar protein A n=1 Tax=Myotis myotis TaxID=5... [more]
POC16.610e-867.50centriolar protein homolog A-like isoform X3 n=1 T... [more]
POC16.930e-867.50centriolar protein homolog A-like isoform X1 n=2 T... [more]
POC17.620e-870.00centriolar protein homolog A n=1 Tax=Sinocyclochei... [more]
POC18.220e-868.29centriolar protein A n=1 Tax=Lates calcarifer TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10485contigEcto-sp9_F_contig10485:179..1904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10485.458.1mRNA_Ecto-sp9_F_contig10485.458.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10485 53..3177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10485.458.1 ID=prot_Ecto-sp9_F_contig10485.458.1|Name=mRNA_Ecto-sp9_F_contig10485.458.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=449bp
MSWRSHLDNRLASGGGGGGGGSVRAPAGFEEGAILVGEEEEEEEEEEAAA
VKGVARRGGLAGSGGGQQRTALGTRTTNARVSTPGRPAGSGVGGGERRPV
SGGRRRLATATAYPAVGESGGGGGGSCSGSSGVPYPRPASGSLRPSSSSR
NPYDARDHAGRSSAAAADAAAAASRRWTARGEYEGRGKQQPPPLPPPPTS
PQQRQRQRQRQQQQQQQQHSFGVEDLEEDGVADDGGGGPAPVGAAAKERD
SYAQLGGRQSERPLSATAAAAVALAAAPAIRTAAADWLSAGEDDYRGGGA
VWRDWTAPAPAVGAAPEAAGAISAPGSFRSGAAATKSSGGDMFGLGEAAL
GGPAHGRRGGAAAAVRGAPGRGLLEGGGVYGTGGGGGGAPRRSLEVDRGA
LPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQQGERAGDALP*
back to top