mRNA_Ecto-sp9_F_contig1038.373.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1038.373.1
Unique NamemRNA_Ecto-sp9_F_contig1038.373.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 2.170e-181
Identity = 286/288 (99.31%), Postives = 287/288 (99.65%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHYEKKK 866
            YNIYNKR+LNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGS IAVAGTLLYSLVKAHYEKKK
Sbjct:  121 YNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKKK 408          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK2_9STRA)

HSP 1 Score: 352 bits (904), Expect = 2.620e-110
Identity = 186/288 (64.58%), Postives = 230/288 (79.86%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHYEKKK 866
            YNIYNK++LN LP+P+ MA+ QL  GLL   PLW++ +RKAPKL+   L  L  LA+LHT AH+TAVLSLGAGAVSFTHIVKAAEP F+A F+A L+GQ FAAPVYL+L+P+IAGV++AS+KEL+FSWV+FGNAMGSNT SALRGI  KK MG P GENM+ ANLYAVLT      L+P+AL++EG K   AW AA+AA  + + L    LLSGL+YY YNEVAFLAL  V+P+THAVGNTIKRVV+I+A+ I F T MTP +IAGS++A+ GTL+Y+L K +Y+KKK
Sbjct:   97 YNIYNKKVLNALPLPYTMAAVQLAAGLLIFVPLWVSGIRKAPKLSRENLKNLFPLASLHTGAHLTAVLSLGAGAVSFTHIVKAAEPAFSALFAAVLMGQVFAAPVYLTLIPVIAGVAVASMKELAFSWVSFGNAMGSNTFSALRGIYAKKNMGNPQGENMNSANLYAVLTCFGIALLTPIALILEGGKMGAAWTAAVAAYGSQQLLLWHALLSGLYYYSYNEVAFLALSQVHPITHAVGNTIKRVVVIIASVIVFGTTMTPTAIAGSSVAILGTLMYALAKNYYQKKK 384          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KWF3_9STRA)

HSP 1 Score: 342 bits (877), Expect = 3.500e-106
Identity = 183/288 (63.54%), Postives = 218/288 (75.69%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHYEKKK 866
            YNIYNK++LN  P+PW MA  QL  GLL   PLW T LRKAPKL+   +  L  LA++HT AH TAVLSLGAGAVSFTHIVKAAEP F+A F+A  LGQ FAAPVY +L+P+I GV++AS+KELSFSW++FGNAMGSNT SALRGI  KK MG PVGENM+ ANLYAVLT +    L P+ALL EG K   +W A +AA      L+  +L SGLFYYLYNEVAFLAL  VNPVTHAVGNTIKRVV+I+A+ + F T MTP ++AGS +A+AGTL Y+L K  +  K+
Sbjct:  104 YNIYNKKVLNAFPLPWTMALMQLAAGLLVFVPLWATGLRKAPKLSIPNVKTLLPLASMHTAAHATAVLSLGAGAVSFTHIVKAAEPAFSALFAALFLGQVFAAPVYAALVPVIGGVAVASMKELSFSWMSFGNAMGSNTFSALRGIFAKKNMGNPVGENMNAANLYAVLTCMGIGLLFPIALLTEGSKWAASWAAGVAAYGGKALLAKHMLFSGLFYYLYNEVAFLALSKVNPVTHAVGNTIKRVVVILASVVVFGTQMTPTAVAGSTVAIAGTLGYALAKNAFPNKE 391          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT)

HSP 1 Score: 329 bits (844), Expect = 1.120e-101
Identity = 176/283 (62.19%), Postives = 211/283 (74.56%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAH 851
            YNI NK+ILN LP PW MA  QLG+GLLY+ PLW++ LRKAPKL+   +  L  +A +H + H+  V+SLGAGAVSFTHIVKAAEP F+   SA      F  PVYL+LLP++ GV +ASL ELSFSWVAF NAMGSNTA +LR I  KK M KP GENM  ANLY VLT+++F  L P AL++EG K K  W AAIAAG TA  L  T L+SGLFYYLYNEVAFL LD+V+P+THAVGNTIKRVVII+A+ + F T MTPL+  GS++A+ G LLYSL K +
Sbjct:   86 YNISNKKILNALPFPWTMAVVQLGVGLLYLLPLWMSPLRKAPKLSSENIKALMPIALMHGIGHLCTVISLGAGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLAKQY 368          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: TPT (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA)

HSP 1 Score: 323 bits (829), Expect = 5.500e-99
Identity = 173/287 (60.28%), Postives = 221/287 (77.00%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHYEKK 863
            YNIYNK+ LN+LP+PW++   QL +GLLYVFPLWL  +RKAPKL+   +  +  +AA+H +AH+TAV+SLGAGAVSFTHI+KAAEP FT+ FSA  L Q F+  VY SL+P++ GV++ASL E  FSW+AF +AM +NTASA RGI  KK M +P G+NM PANLYAVLT+LA   ++PVA LVEG K KPAW+AA+A   + + L + I+ SGL++YLYNEVAFLALDSV+PVTHAVGNTIKRVVII A+ + F+ P+T     GSA+A+AG LLYSL     +K+
Sbjct:  119 YNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAV-TSQRQLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPITLQGYIGSAVAIAGVLLYSLAVERTKKR 404          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYR7_9STRA)

HSP 1 Score: 322 bits (826), Expect = 5.640e-99
Identity = 172/286 (60.14%), Postives = 220/286 (76.92%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKL--RKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHY 854
            YN+ NK++LN LP+PW +++AQLGIGLLYVFP+WL KL  RKAP L    +  L  +A  HT  H+  V+SL AG+VSFTHIVKAAEP F+   SA  L   F  PVYL+L+PI+ GV++ASLKELSF+WV+F NAM SNTA ++R I  KKQM  P+GENMS  NLYAVLT+++F  L+P+A ++EGRK  PAWD+A++AG  +  L+  IL+SGL YYLYNEVAFLAL++V+P+THAVGNTIKRVVIIVA+ I F+T M+  SI GS+IA+ G LLYSL K ++
Sbjct:   88 YNLTNKQVLNALPLPWTISAAQLGIGLLYVFPVWLLKLGGRKAPVLTMENVKTLMPIATCHTTGHLCTVISLSAGSVSFTHIVKAAEPFFSTVMSAVFLKSFFKLPVYLTLIPIVVGVAMASLKELSFTWVSFLNAMASNTAFSMRAIFSKKQMNAPMGENMSAPNLYAVLTIMSFLGLAPLAGVIEGRKIGPAWDSALSAGLESSELTKKILMSGLSYYLYNEVAFLALNAVHPITHAVGNTIKRVVIIVASVIFFKTKMSMQSIIGSSIAIFGVLLYSLAKQYF 373          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP14_9STRA)

HSP 1 Score: 312 bits (800), Expect = 4.430e-95
Identity = 175/286 (61.19%), Postives = 212/286 (74.13%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQM-GKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHYE 857
            YNI+NK+ LN L +PW +A  QL  G+ YV  LW++KLRKAPKL+   L  LS  A  H   HV AVLSLGAGAVSFTHIVKA+EPV +AG +A  L Q    PVYLSL+PII GV+LAS+ ELSF+W+AFG AM SN ASA R IL K  + GKP+GEN++P NLYAVLT+L+F  L P+AL  E    +  W+AA+A+G T K L+ TI  SG+ YYLYNEVAFLALDSV PVTHAVGNTIKRVVII+A+ + F T +TPL  AGS IA+AGTL+YSL K  ++
Sbjct:   95 YNIFNKQALNALDLPWTLALVQLFAGIPYVAILWMSKLRKAPKLSRENLVNLSPSALCHLGTHVGAVLSLGAGAVSFTHIVKASEPVVSAGLTAIFLKQIMPLPVYLSLVPIIGGVALASVTELSFTWLAFGAAMMSNVASASRAILSKTVLSGKPMGENLTPQNLYAVLTILSFFMLLPMALAFEAGSIQSVWNAAVASGLTPKYLAQTIAASGILYYLYNEVAFLALDSVAPVTHAVGNTIKRVVIILASIVVFNTQLTPLGAAGSGIAIAGTLMYSLAKNKFK 380          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: Triosephosphate/phosphate (translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.450e-94
Identity = 168/285 (58.95%), Postives = 215/285 (75.44%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGAT-AKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHY 854
            YNI+NK++LN +P+PW MA+AQLG GLLY+ P+WL +LR AP+L+   +  L+ + A HT  H+  V+SLGAGAVSFTHIVKAAEP+F+   SA +L  TF   VY++LLPI+AGV++AS+ EL+FSWV+F NAMGSNTA +LR I  K  M KP G+NM+P NLYAVLT++AF  + P+ LLVEG K + A++  IA     A    +     GL YYLYNEVAFLAL  V+P+THAVGNTIKRVVI++A+ IAF T M P+SIAGSA+AV+GTLLYSL K+ Y
Sbjct:   90 YNIFNKKMLNAVPLPWTMATAQLGTGLLYILPVWLLRLRAAPQLSLDNIKGLTGITACHTAGHIMTVISLGAGAVSFTHIVKAAEPLFSTLMSAIVLKSTFPWQVYMTLLPIVAGVAIASMTELTFSWVSFLNAMGSNTAFSLRAIFSKMAMNKPQGKNMTPPNLYAVLTIMAFIGVLPLTLLVEGSKIQSAFETGIAGYVGGANKFWTHFFACGLSYYLYNEVAFLALGQVHPITHAVGNTIKRVVILIASVIAFGTKMRPMSIAGSAMAVSGTLLYSLAKSKY 374          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: TPT (domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G2H6_VITBC)

HSP 1 Score: 309 bits (792), Expect = 2.430e-93
Identity = 167/286 (58.39%), Postives = 209/286 (73.08%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKP--VGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHY 854
            YNIYNK+ LN+LP PW +A AQ+ IG+    PLWLT +RKAPKL +GAL  L      HT  HV AV++LGAGAVSF HIVKAAEPVFTAG SAA+LGQ  +   Y +L+P++AGV LAS KELSF+W +FG AM SN +S+LRGI GKK M  P  VGEN++ AN Y++LT+++   L P++   E +   P W AA+A G T   L+  ++LSG+FYYLYNEVAFLAL  VNPVTHAVGNT+KRVVII+A+ + FR P+TPL   GS +A+ GTLLYSL K  +
Sbjct:  136 YNIYNKQALNVLPNPWSVAWAQMFIGIPLFLPLWLTGIRKAPKLKEGALKTLIPQGLFHTGTHVGAVVALGAGAVSFAHIVKAAEPVFTAGLSAAVLGQYLSPITYSALIPVVAGVGLASAKELSFTWTSFGFAMLSNISSSLRGIFGKKTMSDPKAVGENLTAANQYSLLTIISCIALLPLSAFFEYKTLVPNWQAAVANGVTDLALAKLVVLSGIFYYLYNEVAFLALSRVNPVTHAVGNTMKRVVIILASIVVFRNPITPLGAIGSGVAILGTLLYSLAKQKF 421          
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Match: Hypothetical (protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E311_9STRA)

HSP 1 Score: 310 bits (793), Expect = 2.440e-93
Identity = 174/285 (61.05%), Postives = 210/285 (73.68%), Query Frame = 3
Query:    3 YNIYNKRILNILPMPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAK-PAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSAIAVAGTLLYSLVKAHY 854
            YNIYNK+ LN+LPMPW +A+ QL  G+ YV  LW T  RK PKL    L  L  +A  H   H+ AV+SLGAGAVSFTHIVKA+EPV +A  SA +LG  ++   YL+LLPI+ GV+LASLKELSF+W+ FG AM SN +SALRGIL KK MG  VGENM+  NLYAV+T++AF  L PV+LLVE  KA   A + A+AAG + K L+    LSG +YYLYNEVAFLAL  VNPVTHAVGNTIKRVVII+A+ IAF TP++ L + GS+IA+ GTLLYSL K  Y
Sbjct:  148 YNIYNKKALNVLPMPWTLATLQLFAGIPYVLLLWSTGARKTPKLTQDNLKTLFPVACGHLGTHIGAVISLGAGAVSFTHIVKASEPVVSAALSAVMLGAFYSPITYLTLLPIVGGVALASLKELSFTWLGFGAAMLSNVSSALRGILAKKTMGGGVGENMNETNLYAVMTIMAFAVLLPVSLLVETPKAVGAAINTAVAAGTSKKDLAILSALSGAYYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFNTPISRLGVIGSSIAITGTLLYSLAKNKY 432          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1038.373.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TPT2.170e-18199.31domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical2.620e-11064.58protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical3.500e-10663.54protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
TPT1.120e-10162.19domain-containing protein n=2 Tax=Diacronema luthe... [more]
TPT5.500e-9960.28domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical5.640e-9960.14protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical4.430e-9561.19protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Triosephosphate/phosphate1.450e-9458.95translocator n=1 Tax=Tribonema minus TaxID=303371 ... [more]
TPT2.430e-9358.39domain-containing protein n=1 Tax=Vitrella brassic... [more]
Hypothetical2.440e-9361.05protein n=3 Tax=Pelagomonas calceolata TaxID=35677... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1038contigEcto-sp9_F_contig1038:20628..24205 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.4
Seed ortholog evalue5.3e-142
Seed eggNOG ortholog2880.D8LC95
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15283,ko:K15285
KEGG TC2.A.7.9
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionTriose-phosphate transporter domain
Ec32 orthologEc-14_005600.1
Exons3
Model size2592
Cds size828
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1038.373.1prot_Ecto-sp9_F_contig1038.373.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1038 22351..24164 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928245.9835656-UTR-Ecto-sp9_F_contig1038:20627..223501622928245.9835656-UTR-Ecto-sp9_F_contig1038:20627..22350Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1038 20628..22350 -
1692277807.4591515-UTR-Ecto-sp9_F_contig1038:20627..223501692277807.4591515-UTR-Ecto-sp9_F_contig1038:20627..22350Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1038 20628..22350 -
1622928246.0296392-UTR-Ecto-sp9_F_contig1038:24164..242051622928246.0296392-UTR-Ecto-sp9_F_contig1038:24164..24205Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1038 24165..24205 -
1692277807.5095453-UTR-Ecto-sp9_F_contig1038:24164..242051692277807.5095453-UTR-Ecto-sp9_F_contig1038:24164..24205Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1038 24165..24205 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928245.9977126-CDS-Ecto-sp9_F_contig1038:22350..225121622928245.9977126-CDS-Ecto-sp9_F_contig1038:22350..22512Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1038 22351..22512 -
1692277807.4771686-CDS-Ecto-sp9_F_contig1038:22350..225121692277807.4771686-CDS-Ecto-sp9_F_contig1038:22350..22512Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1038 22351..22512 -
1622928246.0085022-CDS-Ecto-sp9_F_contig1038:22966..235131622928246.0085022-CDS-Ecto-sp9_F_contig1038:22966..23513Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1038 22967..23513 -
1692277807.4872713-CDS-Ecto-sp9_F_contig1038:22966..235131692277807.4872713-CDS-Ecto-sp9_F_contig1038:22966..23513Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1038 22967..23513 -
1622928246.0187032-CDS-Ecto-sp9_F_contig1038:24045..241641622928246.0187032-CDS-Ecto-sp9_F_contig1038:24045..24164Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1038 24046..24164 -
1692277807.4989386-CDS-Ecto-sp9_F_contig1038:24045..241641692277807.4989386-CDS-Ecto-sp9_F_contig1038:24045..24164Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1038 24046..24164 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1038.373.1

>prot_Ecto-sp9_F_contig1038.373.1 ID=prot_Ecto-sp9_F_contig1038.373.1|Name=mRNA_Ecto-sp9_F_contig1038.373.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=276bp
MPWLMASAQLGIGLLYVFPLWLTKLRKAPKLADGALGPLSQLAALHTVAH
VTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPII
AGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPA
NLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLS
GLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLS
IAGSAIAVAGTLLYSLVKAHYEKKK*
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mRNA from alignment at Ecto-sp9_F_contig1038:20628..24205-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1038.373.1 ID=mRNA_Ecto-sp9_F_contig1038.373.1|Name=mRNA_Ecto-sp9_F_contig1038.373.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3578bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1038:20628..24205- (Ectocarpus species9 EcSCA_722f female)
GGTACAACATCTACAACAAGAGGATTCTCAATATCCTCCCGATGCCCTGG TTGATGGCGAGCGCCCAGCTCGGGATCGGGTTGCTGTACGTGTTCCCGTT GTGGCTGACGAAGCTGCGCAAGGCCCCTAAGCTTGCCGACGGTGCCCTCG GACCGCTCAGGTATGTCGCGTGGTTGGTCTGCATGTTGCCTAGAGGTGGG CTGGCTTACGGGCCACTGCTTCGTATGGCCAGTGGTTTACTGCTGATTTT GCTGATTCTGCTGCTGTTCTTGGCTAACCTGCTTGTATGTACGAGAGAGA TCCACGATATTTCCCGCAAAACACGAGGCGATAAGTACACTCCATGTCTT TAGTCGGTTGGACAGCACGCAACACACGATCTCTTCTCATGCATCTTGTG TTGCGTTGGTCACGTGGTACGTTGCAATTCTGCATGTGCGGTCATTCTTA GCACGAGTGTGGAAAAAACACCCCAGGTTCCCCGATGCGACCATGCTGCC ACGTACGGCTGGCTGCTGTACTCGTGAAAAGTACGGAAATTGCTGTTAGT TTGTTCCGTCGCCTCCGATACCACACCCGTGCGTGTAGGACATGCCTCGA CAGCACCCGATCTCATCGTGACTCCCACCTACTAATTGTGCCGCTACGCT ACTCCCCCCCCCCGCTGGTTCCACGTCGTCTCCGGAGAGCAGCCAGCTGG CGGCGCTGCACACGGTGGCGCACGTGACGGCGGTGCTCTCCCTGGGCGCC GGTGCGGTCTCCTTCACGCACATCGTCAAGGCTGCCGAGCCCGTCTTCAC GGCAGGGTTCTCCGCCGCCCTCCTCGGCCAGACCTTCGCCGCCCCGGTCT ACCTGTCCCTCCTGCCCATCATCGCGGGAGTGTCCCTGGCGTCCCTCAAG GAGCTCTCCTTCTCCTGGGTGGCGTTCGGCAACGCCATGGGCTCCAACAC GGCCTCCGCGCTGCGCGGCATCCTGGGCAAGAAGCAGATGGGCAAGCCGG TCGGGGAGAACATGAGCCCGGCCAACCTCTACGCCGTGCTGACCGTGCTC GCGTTCTGCTTCCTGTCGCCCGTGGCGCTGCTGGTGGAGGGCAGGAAGGC CAAGCCCGCGTGGGACGCGGCCATCGCGGCTGGCGCCACGGCGAAGGGCT TGTCGTCGACCATCCTGCTGTCCGGCCTCTTCTACTACCTCTACAACGAG GTCGCCTTCCTAGCCTTGGACTCCGTCAACCCCGTCACGGTGAGAGCGCG ACCGGCCGGCCATGGCGGTGGCTGTGGTTCATGGCTATCAGTAGATGGGG GGGGGGTACGTATACTGCTTCGAGTGTGTTCCTTGATTTTCGTTGCCCAA TCCTGCGTGGGACGGAGGTCGCGGCCCCTTGCCGAGGGCACCAGTTCTGA CCTCGTGTGCAAAGCGCGGCCAAAGTGCCCACACCATTGGTATGTACCGT GAACGAAAAACATAATGTTTTCATTTAACGCCTTCGACACGAAGCTGCCT CTGTGGTCAAGAGCTGCTGCTGTTGTGCGCGAGTCTATCGCTTCCCGTCG CAATCGCCAATCTGCGGGCCCTCTTCACGCTTGCCGTGGCCAGCGCGGTC TCTTTCAATTTTATATGCACTTCACCAGCGTACTAATCTCCCCCGCCCCC TCCCTCCGCCTCCGCTACGCGTGCTCTCTCTCCCGGCGCGCAGCACGCCG TGGGTAACACGATCAAGCGCGTGGTTATCATCGTTGCGGCGTGCATCGCG TTCCGCACGCCGATGACGCCACTATCCATCGCCGGTTCCGCTATCGCGGT GGCCGGCACGCTGCTGTACTCCTTGGTGAAGGCACACTACGAGAAGAAGA AGTAGATTTAGAGATGGAAAACCCGGACGCCCGGTTCCTCCTCCCCTGCG TGACTTCTTGACGACGTGGTATACGCTAGAAAGGAGGGGAGTTTGAGGCC ACACGCCTTGCGTTTTGCGCCCCTTCTCGGTTTGATCGAGAGGCACAACT CGGGGAAGAAACCTGCGGAGATAACGCCCCTCGCGTTACTGCTGTGGTAT CGTTGTGTTGGACCGGTTCATGCCACGTAGTTATAGAGACGAGGGGGCCA GCACTTGTTCCAGGCCCGTTTTTAAGACTCTGGGATTATCCGTCTGTAAC TCTTTGCAGACAGACAGGCTGAGCTGTGGGTGGGGTTGGGTGGTAGGGGG CTAAAGTTAGAAAATTGACCTGCACAGTGGTTCAGGGTGGCTTGCGATAA TCAGTGCGAGTCGGGGTAGAGTAATATTTAGGGGGAGAACGGCTATCTTT GCTGTCGTGTGGGAGGGGGGGTTCCGAAGAACTTCGAACATATGAGGGTT GCATAGTAGACTGTGCGCTGGTCACGCGGTGCTAAATATAGAGACTGGCG CGTCTGGCGGGTGTGCGCCCTGTGTACTGTGCTTGCACCAAGTGTCGCGA CAATTGATATGCACGTGTGGCCTCTCCCACTGCTCGCGTCATAGGTAGGG GGACCAGGGCCCTTTCGATGAGGTTATAGCGTAGACTATGTGTCCTTTTA CGGTTCGGTGTTTCGATTGCAAGAGACGACGCGTTATCCGCCTCGTTCTG GCAGTTTTGTGGGTATCTTGTTCACACGTGGCTCTTAGAGGACCGAGGAT GGCCAAATGCAGAAAAGCTGAAGCAATGGGACGTTGGTGCGGTGGTGACA CAGAGCTAAAAAGGCTTCGTGGTGGTCTTGCATGGCGTGCTTTCGGATTA GCTCCTCGCTTGCACCACGGTAGCTAAAACCGTGCAGCTTGATTAAGGGG GGGGGCGTGAGCCAGCTGCGTTTTTGTTTCTCCCCGTTTTGTCCTGTCTG CGGGGAAGCGGCCGCGTGCCGCTATTTTCCGCAGGCATGATGTCTTGTTG CTGTCTCTGACTATGGCTTGCTTTGTTCGGGCTGCTCGTCACACGCGTGA CCAACAGCACTTGTCCTCTCCGTCAACAGGCAGAGGGGGGGAGGGGGAGG TACGCGAAAGACTGCAGGGCATTGCACAGGCACAGGAAAACATGTTTTCA GTTTTGCTCGGTGCACCTTAGACGGGGTAGCGGGAGTGCCAATGAAACAA GAATTATGGGCATAATTTTCTTTTTATTTCGTCGAGCCTGTGTTCTTACT GCCGATACGGTCGCTGTTGTAGAAAGTCTTGCGGGCCAACATGCAGAACA GTTTCTTGCTGTACTGGCTTGCGGAATTGCGTGACGCGCGTGGGGCCCGA TATTTCGTGGCAAGCGGTGGAGGAGTCGAAGGTGTTCTTTGTCCTTCTTG ACTCGGCCGTCCCTGCCCAAGCATCTAGCGTCCAGAATGCCCAGGAAAAG CTTCGGGGGAAGAGTACATTTCAACAGAACGAGTCCTGACTGGAGGGGGT CGATCTTAGCGGGGATCGGGTGGGTCTCATGGCTCGGCGCTGGTCATTTC GAGTGGCATTTTGACGTGCTTTGATCGCAATCCACCAGAAAAACGGTCGC ACCTTCCAACAACAAACCACCTTCTTTCTGCGCATAGCACCGACCTGTGA TGTGATGCACATTCCAATAATTCATGGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1038:20628..24205-

>mRNA_Ecto-sp9_F_contig1038.373.1 ID=mRNA_Ecto-sp9_F_contig1038.373.1|Name=mRNA_Ecto-sp9_F_contig1038.373.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1656bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1038:20628..24205- (Ectocarpus species9 EcSCA_722f female)
ATGCCCTGGTTGATGGCGAGCGCCCAGCTCGGGATCGGGTTGCTGTACGT
GTTCCCGTTGTGGCTGACGAAGCTGCGCAAGGCCCCTAAGCTTGCCGACG
GTGCCCTCGGACCGCTCAGATGCCCTGGTTGATGGCGAGCGCCCAGCTCG
GGATCGGGTTGCTGTACGTGTTCCCGTTGTGGCTGACGAAGCTGCGCAAG
GCCCCTAAGCTTGCCGACGGTGCCCTCGGACCGCTCAGCCAGCTGGCGGC
GCTGCACACGGTGGCGCACGTGACGGCGGTGCTCTCCCTGGGCGCCGGTG
CGGTCTCCTTCACGCACATCGTCAAGGCTGCCGAGCCCGTCTTCACGGCA
GGGTTCTCCGCCGCCCTCCTCGGCCAGACCTTCGCCGCCCCGGTCTACCT
GTCCCTCCTGCCCATCATCGCGGGAGTGTCCCTGGCGTCCCTCAAGGAGC
TCTCCTTCTCCTGGGTGGCGTTCGGCAACGCCATGGGCTCCAACACGGCC
TCCGCGCTGCGCGGCATCCTGGGCAAGAAGCAGATGGGCAAGCCGGTCGG
GGAGAACATGAGCCCGGCCAACCTCTACGCCGTGCTGACCGTGCTCGCGT
TCTGCTTCCTGTCGCCCGTGGCGCTGCTGGTGGAGGGCAGGAAGGCCAAG
CCCGCGTGGGACGCGGCCATCGCGGCTGGCGCCACGGCGAAGGGCTTGTC
GTCGACCATCCTGCTGTCCGGCCTCTTCTACTACCTCTACAACGAGGTCG
CCTTCCTAGCCTTGGACTCCGTCAACCCCGTCACGCCAGCTGGCGGCGCT
GCACACGGTGGCGCACGTGACGGCGGTGCTCTCCCTGGGCGCCGGTGCGG
TCTCCTTCACGCACATCGTCAAGGCTGCCGAGCCCGTCTTCACGGCAGGG
TTCTCCGCCGCCCTCCTCGGCCAGACCTTCGCCGCCCCGGTCTACCTGTC
CCTCCTGCCCATCATCGCGGGAGTGTCCCTGGCGTCCCTCAAGGAGCTCT
CCTTCTCCTGGGTGGCGTTCGGCAACGCCATGGGCTCCAACACGGCCTCC
GCGCTGCGCGGCATCCTGGGCAAGAAGCAGATGGGCAAGCCGGTCGGGGA
GAACATGAGCCCGGCCAACCTCTACGCCGTGCTGACCGTGCTCGCGTTCT
GCTTCCTGTCGCCCGTGGCGCTGCTGGTGGAGGGCAGGAAGGCCAAGCCC
GCGTGGGACGCGGCCATCGCGGCTGGCGCCACGGCGAAGGGCTTGTCGTC
GACCATCCTGCTGTCCGGCCTCTTCTACTACCTCTACAACGAGGTCGCCT
TCCTAGCCTTGGACTCCGTCAACCCCGTCACGCACGCCGTGGGTAACACG
ATCAAGCGCGTGGTTATCATCGTTGCGGCGTGCATCGCGTTCCGCACGCC
GATGACGCCACTATCCATCGCCGGTTCCGCTATCGCGGTGGCCGGCACGC
TGCTGTACTCCTTGGTGAAGGCACACTACGAGAAGAAGAAGTAGCACGCC
GTGGGTAACACGATCAAGCGCGTGGTTATCATCGTTGCGGCGTGCATCGC
GTTCCGCACGCCGATGACGCCACTATCCATCGCCGGTTCCGCTATCGCGG
TGGCCGGCACGCTGCTGTACTCCTTGGTGAAGGCACACTACGAGAAGAAG
AAGTAG
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