prot_Ecto-sp9_F_contig10232.257.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10232.257.1
Unique Nameprot_Ecto-sp9_F_contig10232.257.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length165
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10232.257.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q5_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 7.590e-55
Identity = 124/159 (77.99%), Postives = 127/159 (79.87%), Query Frame = 0 
Query:    7 KVETLKASLAATEAERLELETLLNDASLGSEAASRDAEAQVDALKAELEASGREVAVASEERRQIEEALADGQEGLLALREALERTVDAARGLLERAEAVAADAEAGEVETLEAELRCLERRAPHSRRRVSSTXXXXXXXSASPPRLPLPAGRGLRSAV 165
            +VETLKASLAATEAERLELETLL DAS G+EAASRDA+AQ                VASEERRQIEEA ADGQEGLLALREAL RT DAARGLLERAEAV ADAEAGEVETLEAELRCLERRAPHSRRR  ST       SASPP LPLPAGRGLRSAV
Sbjct: 3378 EVETLKASLAATEAERLELETLLEDASHGAEAASRDAKAQXXXXXXXXXXXXXXXXVASEERRQIEEAFADGQEGLLALREALGRTGDAARGLLERAEAVTADAEAGEVETLEAELRCLERRAPHSRRRAPSTAAHHRRRSASPPGLPLPAGRGLRSAV 3536
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BLAST of mRNA_Ecto-sp9_F_contig10232.257.1 vs.
Match: Methyl-accepting (transducer domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 5.490e-10
Identity = 56/109 (51.38%), Postives = 60/109 (55.05%), Query Frame = 0 
Query:    7 KVETLKASLAATEAERLELETLLNDASLGSEAASRDAEAQVDALKAELEASGREVAVASEERRQIEEALADGQEGLLALREALERTVDAARGLLERAEAVAADAEAGEV 115
            +VE+LKASLAATEAERLELETLL DAS G+EAASRD EAQVDA                                              ARGLL+RAEAVAADAEAGEV
Sbjct: 2044 EVESLKASLAATEAERLELETLLKDASHGAEAASRDTEAQVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGLLKRAEAVAADAEAGEV 2152
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10232.257.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized7.590e-5577.99protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Methyl-accepting5.490e-1051.38transducer domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availableCOILSCoilCoilcoord: 108..135
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availableCOILSCoilCoilcoord: 40..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10232contigEcto-sp9_F_contig10232:317..1732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10232.257.1mRNA_Ecto-sp9_F_contig10232.257.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10232 317..1732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10232.257.1 ID=prot_Ecto-sp9_F_contig10232.257.1|Name=mRNA_Ecto-sp9_F_contig10232.257.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=165bp
MIPSQQKVETLKASLAATEAERLELETLLNDASLGSEAASRDAEAQVDAL
KAELEASGREVAVASEERRQIEEALADGQEGLLALREALERTVDAARGLL
ERAEAVAADAEAGEVETLEAELRCLERRAPHSRRRVSSTAAHHRRRSASP
PRLPLPAGRGLRSAV
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