prot_Ecto-sp9_F_contig1023.253.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1023.253.1
Unique Nameprot_Ecto-sp9_F_contig1023.253.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length499
Homology
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Calponin (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS06_ECTSI)

HSP 1 Score: 854 bits (2207), Expect = 9.780e-311
Identity = 474/490 (96.73%), Postives = 478/490 (97.55%), Query Frame = 0
Query:    1 MSDKQGQGHLGVGKPSVADEKGGTSGGGVSGDDGDARASRDREDGRPACLPLPSPPRLPSKRTLTDSVMDSTVARFEASCKLTGQGTAAAPSAARTALATVSSPANTVRTPSWDKNATPADLEARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPSLVAAVPPADEDEDGDDG---DGKDNAVADXXXXXXGAFGDFWRASVSRTGGNAPREGGGGRDGDVAGDNTLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHPSRSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRAAKATSNLSATSSRGMTLSPAGIWGTGAGTAPREGIGKSASPAAAXXXXXXXXXXXXSHTGSEDPEGTEEGA 487
            MSDKQGQGHLGVGKPSVADEKGGTSGGGVSGDDGDARASRDREDGRPACLPLPSPPRLPSKRTLTDSVMDSTVARFEASCKLT QGTAAAPSAARTALATVSS ANTVRTPSWDKNATPA LEARERTAQAWIEAVSGRACVEYQTKQFARN+MSGE+LCALVNAIRPGTIP VHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADP+LVAAVPPADEDE GDDG   DGKDNAV  XXXXX GAFGDFWRASV RTGGNAPREGGGGRDGDVAGDNTLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHP+RSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRAAKATSNLSATSSRGMTLSPAGIWGTGAGTAPREGIGKSASPAAAXXXXXXXXXXXXSHTGSEDPEGTEEGA
Sbjct:    1 MSDKQGQGHLGVGKPSVADEKGGTSGGGVSGDDGDARASRDREDGRPACLPLPSPPRLPSKRTLTDSVMDSTVARFEASCKLTEQGTAAAPSAARTALATVSSAANTVRTPSWDKNATPAHLEARERTAQAWIEAVSGRACVEYQTKQFARNLMSGEILCALVNAIRPGTIPHVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPTLVAAVPPADEDE-GDDGGXXDGKDNAVXXXXXXXDGAFGDFWRASV-RTGGNAPREGGGGRDGDVAGDNTLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHPTRSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRAAKATSNLSATSSRGMTLSPAGIWGTGAGTAPREGIGKSASPAAAXXXXXXXXXXXXSHTGSEDPEGTEEGA 488          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Calponin-homology ((CH) domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ6_9PHAE)

HSP 1 Score: 772 bits (1994), Expect = 4.600e-278
Identity = 415/460 (90.22%), Postives = 425/460 (92.39%), Query Frame = 0
Query:    1 MSDKQGQGHLGVGKPSVADEKGGTSGGGVSGDDGDARASRDREDGRPACLPLPSPPRLPSKRTLTDSVMDSTVARFEASCKLTGQGTAAAPSAARTALATVSSPANTVRTPSWDKNATPADLEARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPSLVAAVPPADEDEDGDDGDGKDNAVADXXXXXXGAFGDFWRASVSRTGGNAPREGGGGRDGDVAGDNTLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHPSRSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRAAKATSNLSATSSRGMTLSPAGIWGTGAGTAPREGIGKSASPAAA 460
            M DKQGQGHLGV +PSVADEKGGTSGGGVSGDDGD+R S DREDG+PACLPLPSPPRLPSKRTLTDSVMDSTV+RF+ASCKL+ QGTAAAPSAARTALA+VSS  NTVRTPSWDKNA+PADLEARERTAQAWIEAVSGRACV YQTKQFARNIMSGE+LCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPSLVA VPPADEDE              XXXXX GAFGDFWRASV  TGGNAP EGGGG DGDVA DN LVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHP RSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKR AK TSNLSATSSRGMTLSPAGIWGTGAG  PR+GIGKSASPAAA
Sbjct:    1 MPDKQGQGHLGVERPSVADEKGGTSGGGVSGDDGDSRGSGDREDGKPACLPLPSPPRLPSKRTLTDSVMDSTVSRFKASCKLSDQGTAAAPSAARTALASVSSAPNTVRTPSWDKNASPADLEARERTAQAWIEAVSGRACVAYQTKQFARNIMSGEILCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPSLVAVVPPADEDEGXXXXXXXXXXXXXXXXXXDGAFGDFWRASVG-TGGNAPHEGGGGHDGDVASDNMLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHPPRSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRTAKITSNLSATSSRGMTLSPAGIWGTGAGAVPRQGIGKSASPAAA 459          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Calponin (homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.060e-30
Identity = 63/118 (53.39%), Postives = 87/118 (73.73%), Query Frame = 0
Query:  126 ERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLG 243
            ERTAQ W+EAV+G   V+++   FA ++  G +LC L+NAI+PGTI R++ S++ F+QMENI++FL AC  LGV  ++L +T D+FE +D   V+ C+ ALGSAVQ S PEF GPHLG
Sbjct:   27 ERTAQEWMEAVTG---VKFEGS-FASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHLG 140          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: CNN1 (protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPU7_9DINO)

HSP 1 Score: 105 bits (263), Expect = 1.030e-23
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 0
Query:  124 ARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEF 237
            A E  A AWI+AV+G + V      FA  + SG VLC LVN I+PGTI +V+   + F++ ENI++FL AC   GVQ +AL  T D+FE ++   VV CV+ALG AVQ S P+F
Sbjct:    8 AAEEQAAAWIQAVTGHSVVN----DFAGCLRSGAVLCDLVNCIQPGTIAKVNSPGMPFKERENISNFLRACRNFGVQEYALFSTDDLFEEKNLMSVVNCVYALGGAVQRSVPDF 117          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Cnn3 (protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812H1J4_9DINO)

HSP 1 Score: 111 bits (278), Expect = 1.660e-23
Identity = 59/120 (49.17%), Postives = 77/120 (64.17%), Query Frame = 0
Query:  124 ARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLG 243
            A E  A AWI+ V+G A V      FA ++ SG VLC LVN I+PGTI +V+   + F++ ENI++FL AC   GVQ +AL  T D+FE ++   VV CV+ALG AVQ S P+F GP  G
Sbjct:  182 AAEEQAAAWIQEVTGHAVVN----DFAGSLRSGAVLCDLVNCIQPGTIAKVNSPGMPFKERENISNFLRACRNFGVQEYALFSTDDLFEEKNLMSVVNCVYALGGAVQRSVPDFPGPVFG 297          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PVF5_ALECA)

HSP 1 Score: 107 bits (268), Expect = 2.170e-23
Identity = 51/114 (44.74%), Postives = 76/114 (66.67%), Query Frame = 0
Query:  132 WIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPA 245
            WIE V+G    E    ++ +N   G VLC+L N I+PGT+ +V+ S + F+QMENI  F++A  ++GV   ++  T D++E ++   V+ C+H+LGSAVQVSCP +GGP LG A
Sbjct:   53 WIEEVTGEKRGEQSAAEWLKN---GAVLCSLANKIKPGTVKKVNTSAMPFKQMENITFFMNAAREVGVPESSMFGTPDLYEEKNMGSVMSCIHSLGSAVQVSCPSYGGPKLGHA 163          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V4E0_9DINO)

HSP 1 Score: 111 bits (277), Expect = 5.670e-23
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 0
Query:  124 ARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPA 245
            A E    AWI++VSG A  +    ++ +   SG+VLC L+NAI+PG I +V+ S + F+QMENI  F++A  +LGV   ++    D++E ++   V+ C+HALGSAVQVSCPEF GP LG A
Sbjct:  245 ALEAEVVAWIQSVSGEAKGDESPHEWLK---SGQVLCKLINAIKPGKIAKVNTSAMPFKQMENITFFMNAARELGVPESSMFGCPDLYEEKNMGSVMNCLHALGSAVQVSCPEFTGPKLGHA 363          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JU22_POLGL)

HSP 1 Score: 110 bits (274), Expect = 3.690e-22
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 0
Query:  121 DLEARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPA 245
            D +A E  A+ W++A++G   V      F   + SG+VLC LVN+IR G++ +++ + + F++ ENI++FL  C  LGVQ +AL  T D++E ++   VV CVHALG AVQ S PEF GPH G A
Sbjct:  345 DAQAEEDAAR-WVQAITGEEVVG----DFFDALRSGQVLCQLVNSIRAGSVAKINSAGMPFKERENISNFLRVCRSLGVQEYALFSTDDLYEEKNLQSVVNCVHALGGAVQRSVPEFRGPHFGVA 464          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Calponin (domain-containing protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A7WQ46_NOCSC)

HSP 1 Score: 107 bits (268), Expect = 7.240e-22
Identity = 51/112 (45.54%), Postives = 76/112 (67.86%), Query Frame = 0
Query:  132 WIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLG 243
            WI+ VSG +  +     FA  +  G+VLCAL+NAI+PG IP+V++S L F+QMENI  F++A   +GV   ++  T D++E ++   V++C++ LG AVQV+ PEF GP LG
Sbjct:  238 WIQTVSGSSIGD---ASFAEWLHDGKVLCALINAIKPGAIPKVNQSTLAFKQMENITYFMNAARDMGVPESSMFGTPDLYEEKNIGSVIQCIYTLGGAVQVNVPEFTGPKLG 346          
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W504_9DINO)

HSP 1 Score: 110 bits (274), Expect = 7.470e-22
Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0
Query:  124 ARERTAQAWIEAVSGRACVEYQTKQFARNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLG 243
            A E+    WIEA+SG    + +T Q    + +G +LC LVNAIRPGTI +VH S+L F+QMENI  F S   ++GV   A+  TAD+FE ++   V+ C+     AVQV  PEF GPHLG
Sbjct:  541 ALEKQVTEWIEAISGEKKGDEETIQ--EWLKNGRILCVLVNAIRPGTIKKVHSSKLAFKQMENITFFTSVAREVGVPESAMFGTADLFEGKNMGSVMTCIFMFAGAVQVHWPEFPGPHLG 658          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1023.253.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Calponin9.780e-31196.73domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Calponin-homology4.600e-27890.22(CH) domain-containing protein n=1 Tax=Ectocarpus ... [more]
Calponin3.060e-3053.39homology domain-containing protein n=1 Tax=Tribone... [more]
CNN11.030e-2349.12protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 Ta... [more]
Cnn31.660e-2349.17protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=63... [more]
Hypothetical2.170e-2344.74protein n=1 Tax=Alexandrium catenella TaxID=2925 R... [more]
Hypothetical5.670e-2346.72protein n=1 Tax=Alexandrium monilatum TaxID=311494... [more]
Hypothetical3.690e-2244.80protein n=1 Tax=Polarella glacialis TaxID=89957 Re... [more]
Calponin7.240e-2245.54domain-containing protein n=1 Tax=Noctiluca scinti... [more]
Hypothetical7.470e-2247.50protein n=1 Tax=Alexandrium monilatum TaxID=311494... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 149..164
score: 37.5
coord: 198..213
score: 34.56
coord: 182..198
score: 42.91
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 125..226
e-value: 3.6E-17
score: 73.1
IPR001715Calponin homology domainPFAMPF00307CHcoord: 124..229
e-value: 5.2E-18
score: 65.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 123..231
score: 17.291
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 114..236
e-value: 4.1E-28
score: 99.6
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 124..234
NoneNo IPR availablePANTHERPTHR18959:SF85TRANSGELINcoord: 123..235
NoneNo IPR availablePANTHERPTHR18959CALPONIN/TRANSGELINcoord: 123..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1023contigEcto-sp9_F_contig1023:1974..10387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1023.253.1mRNA_Ecto-sp9_F_contig1023.253.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1023 1974..10387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1023.253.1 ID=prot_Ecto-sp9_F_contig1023.253.1|Name=mRNA_Ecto-sp9_F_contig1023.253.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=499bp
MSDKQGQGHLGVGKPSVADEKGGTSGGGVSGDDGDARASRDREDGRPACL
PLPSPPRLPSKRTLTDSVMDSTVARFEASCKLTGQGTAAAPSAARTALAT
VSSPANTVRTPSWDKNATPADLEARERTAQAWIEAVSGRACVEYQTKQFA
RNIMSGEVLCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQ
AHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPSL
VAAVPPADEDEDGDDGDGKDNAVADDGDDEDGAFGDFWRASVSRTGGNAP
REGGGGRDGDVAGDNTLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATL
SARARQMCPTEMVNSPRALVFNADPVGHPSRSPTLRAAWESNATNGGRAA
AGRSAWGTDAYPAKRAAKATSNLSATSSRGMTLSPAGIWGTGAGTAPREG
IGKSASPAAASANSATTAAVAASHTGSEDPEGTEEGAEETGGGGGGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
IPR036872CH_dom_sf