prot_Ecto-sp9_F_contig10229.252.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10229.252.1
Unique Nameprot_Ecto-sp9_F_contig10229.252.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10229.252.1 vs.
Match: SnoaL-like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.170e-44
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 
Query:    1 QTLRTLVEINVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEDDKRRKKRRWR 84
            QTLRTLVEI VLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEDDKRRKKRRWR
Sbjct:  414 QTLRTLVEIKVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEDDKRRKKRRWR 497
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BLAST of mRNA_Ecto-sp9_F_contig10229.252.1 vs.
Match: UVR (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 9.270e-43
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 
Query:    1 QTLRTLVEINVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEDDKRRKKRRWR 84
            QTLRTLVEI VLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFE+DKRRKKRRWR
Sbjct:  597 QTLRTLVEIKVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEEDKRRKKRRWR 680
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BLAST of mRNA_Ecto-sp9_F_contig10229.252.1 vs.
Match: SnoaL-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.380e-12
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:    3 LRTLVEINVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSL 71
            LR L     L + E+ +L+TDVIKHAA +EAS  E+AYELLLAH NED+ D   + +FVDQCK +   +
Sbjct:  303 LRRLGREGRLNQREKAQLITDVIKHAAGEEASMAEIAYELLLAHDNEDMADQGRVEDFVDQCKALTEII 371
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10229.252.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
SnoaL-like3.170e-4498.81domain-containing protein n=1 Tax=Ectocarpus silic... [more]
UVR9.270e-4397.62domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
SnoaL-like3.380e-1252.17domain-containing protein n=1 Tax=Tribonema minus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10229contigEcto-sp9_F_contig10229:950..1852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10229.252.1mRNA_Ecto-sp9_F_contig10229.252.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10229 950..3057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10229.252.1 ID=prot_Ecto-sp9_F_contig10229.252.1|Name=mRNA_Ecto-sp9_F_contig10229.252.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=85bp
QTLRTLVEINVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNED
LEDTDTLAEFVDQCKVIASSLFEDDKRRKKRRWR*
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