prot_Ecto-sp9_F_contig1021.237.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1021.237.1
Unique Nameprot_Ecto-sp9_F_contig1021.237.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length333
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1021.237.1 vs.
Match: WD (repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 2.000e-111
Identity = 246/326 (75.46%), Postives = 248/326 (76.07%), Query Frame = 0 
Query:    1 SREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKEKHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEAIAAGAEAPDALRLGQARKGAVEKLTANYVRRQETSGPPDSEKMRWAAMVPRLHDQVMAPLIEVEQNMHASLRRKVEDAARARLQMQMAREQEAARQREIQARQXEQNRIWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVREELKDMRVEEARCRKAWKIADRELLIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQARSEREKALEMQLRRVKVAQ 326
            SREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKEKHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEA+A GAEAPDALRLGQARKGAVEKLTANYVRRQETSGPPDSEKMRW AMVPRLHDQVMAPLIEVEQNMHASLRRKVEDAARARLQMQMAREQEAARQRE+QARQ EQNRIW  XXXXXXXXXXXXXXXXXXX          VREELKDMRVE                                                               ARSEREKALEMQLRRVKVAQ
Sbjct: 2631 SREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKEKHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEAMAVGAEAPDALRLGQARKGAVEKLTANYVRRQETSGPPDSEKMRWGAMVPRLHDQVMAPLIEVEQNMHASLRRKVEDAARARLQMQMAREQEAARQREMQARQQEQNRIWQAXXXXXXXXXXXXXXXXXXXREAKRLEKLRVREELKDMRVE---------------------------------------------------------------ARSEREKALEMQLRRVKVAQ 2893
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BLAST of mRNA_Ecto-sp9_F_contig1021.237.1 vs.
Match: PHD-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKE0_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.280e-39
Identity = 94/127 (74.02%), Postives = 96/127 (75.59%), Query Frame = 0 
Query:    1 SREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKEKHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEAIAAGAEAPDALRLGQARKGAVEKLTANYVRRQETSG 127
            SRERE WVRVSEL PRALLLWV+WRSLAKREAELAE                           ARAEHFKMAFYSILKAHETAVAGLLEEA+A GAEAPDALRL QARKGAVEKLTANYVRRQETSG
Sbjct: 3550 SRERETWVRVSELSPRALLLWVKWRSLAKREAELAE---------------------------ARAEHFKMAFYSILKAHETAVAGLLEEAMAMGAEAPDALRLEQARKGAVEKLTANYVRRQETSG 3649
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BLAST of mRNA_Ecto-sp9_F_contig1021.237.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K2_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.300e-10
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0 
Query:  134 MRWAAMVPRLHDQVMAPLIEVEQNMHASLRRKV 166
            MRW AMVPRLHDQVMAPLIEVEQNMHASLRRKV
Sbjct:    1 MRWGAMVPRLHDQVMAPLIEVEQNMHASLRRKV 33
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1021.237.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
WD2.000e-11175.46repeat domain-containing protein, putative n=1 Tax... [more]
PHD-type2.280e-3974.02domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized3.300e-1096.97protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..199
NoneNo IPR availableCOILSCoilCoilcoord: 206..228
NoneNo IPR availableCOILSCoilCoilcoord: 253..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1021contigEcto-sp9_F_contig1021:1097..7314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1021.237.1mRNA_Ecto-sp9_F_contig1021.237.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1021 1097..7314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1021.237.1 ID=prot_Ecto-sp9_F_contig1021.237.1|Name=mRNA_Ecto-sp9_F_contig1021.237.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=333bp
SREREIWVRVSELRPRALLLWVEWRSLAKREAELAEVRRRQGRRQREEKE
KHERAQQVVRHRQARAEHFKMAFYSILKAHETAVAGLLEEAIAAGAEAPD
ALRLGQARKGAVEKLTANYVRRQETSGPPDSEKMRWAAMVPRLHDQVMAP
LIEVEQNMHASLRRKVEDAARARLQMQMAREQEAARQREIQARQQEQNRI
WQAAAREREEQRRRQAEQRAAAREAKRLEKLRVREELKDMRVEEARCRKA
WKIADRELLIRRQQQQLQQQQQQLQHRQQQQQQQQRLQQQQQQQQMVAGG
DGGAQQARSEREKALEMQLRRVKVAQVRPLFF*
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