mRNA_Ecto-sp9_F_contig10192.224.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: Sulfotransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 507 bits (1305), Expect = 2.100e-174 Identity = 266/297 (89.56%), Postives = 272/297 (91.58%), Query Frame = 1
Query: 298 TAVVATAADATDLARGPGGSDGLSRVSGVARRAESQGDGRWRRNGGAGDWGDGSFRGGAARVGKGGEREAVNGGGRAMASTPTFHMLRVRKRNGEGERQGSEPPRLELLGGDGGGGAESATSASGPFSLRRYESFEAYATEQSASGNAILPVPIVRPPGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
TAVV T ADAT LARGPGGSDGLSRVSG RRAESQGD R RRNGGAGDWGDG FRGGAAR K G+REAVNGGGRAMA+ PTFHMLRVRKR+GEGE GS PPRLE LGGDGGGG ESATSA GPFSLRRYESFEAYATEQSASGNAILPVPIVRPPGK PEASRSIPLAIIIGTQ GTQNLRSHLLTHPSLSGLRQ+EAHFFDWFWFPSDP KKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAV PSKRDTMATVES+PLY FFPLAPYRM+MVLP ARLVLILRDPTER
Sbjct: 106 TAVVFTTADATALARGPGGSDGLSRVSGARRRAESQGDRRGRRNGGAGDWGDGGFRGGAARARKSGKREAVNGGGRAMAAIPTFHMLRVRKRDGEGEPLGSAPPRLEFLGGDGGGGGESATSAPGPFSLRRYESFEAYATEQSASGNAILPVPIVRPPGKGPEASRSIPLAIIIGTQKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFPSDPNKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVDPSKRDTMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTER 402
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: Sulfotransfer_1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 306 bits (783), Expect = 4.750e-96 Identity = 162/183 (88.52%), Postives = 167/183 (91.26%), Query Frame = 1
Query: 649 ESATSASGPFSLRRYESFEAYATEQSASGNAILPVPIVRPPGKVPEASRSIPLAIIIGTQAR---GTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
+SA SA PFSL+RYESFEAYATEQSASGNAILPVPIVRPPGK PEASRSIPLAIIIGTQA GTQNLRSHLLTHPSLSGLRQ+EAHFFDWFWF SDP K RHEW GDGRGGAGLN SAAGEVLSAYADRAM+AV P KRDTMATVESTPLYFF+PLAPYRMKMVLP ARLVLILRDPTER
Sbjct: 165 DSAISAWAPFSLKRYESFEAYATEQSASGNAILPVPIVRPPGKGPEASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDP-KSRHEWRGDGRGGAGLNSSAAGEVLSAYADRAMEAVDPRKRDTMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTER 346
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: Similar (to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI) HSP 1 Score: 134 bits (337), Expect = 4.260e-32 Identity = 92/177 (51.98%), Postives = 109/177 (61.58%), Query Frame = 1
Query: 682 LRRYESFEAYATEQSASGNAILPVPIVRP-PGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPG---DGRGGAGLNPSAAGEVLSAYADRAMKAV-APSKRD---TMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
+R Y SF AYA E S LPVP+V P G+ P S +PL IIG Q GTQNLRSHLL HP LSG+ EAHFFD D EWPG D R A L SAAGEVL Y++ M+ + AP + + TV+S+P+Y F+PLAPYRMKMV P ARLV+IL+DPT R
Sbjct: 83 VRHYNSFAAYAAEMLNSTEP-LPVPVVTPNDGRRPPMS--LPLGTIIGVQKGGTQNLRSHLLQHPLLSGVPGTEAHFFD---RNPDTYPSLGEWPGNTGDARR-AKLPASAAGEVLELYSNATMRTIGAPDELEEAGVTVTVDSSPMYIFYPLAPYRMKMVQPHARLVVILKDPTAR 252
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: Putative (deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.870e-27 Identity = 87/208 (41.83%), Postives = 117/208 (56.25%), Query Frame = 1
Query: 601 EPPRLELLGGDGGGGAESATSASGPFSLRRYESFEAYATEQSASGNAILPVPIVRPPGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPE--KKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTM----------ATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
E +L++LG +A ++G L++Y SF YA E S S + LP+P+V P G+ + SIPL IIG Q GT NLR +LLTHP ++G+ E HFFD DP+ K W GDGR L+P A G +LS YA ++ P K+ VES+P Y P+APYRM+MVLP A+LV++LRDPT+R
Sbjct: 76 EKRKLQVLG-------VNADESAGGGLLKQYTSFAKYALESSNSSDP-LPLPLVAPIGE--RSLLSIPLITIIGVQKGGTTNLRRNLLTHPLVTGM-PNEVHFFD-----QDPDIYPKLGHWQGDGREKE-LSPGAIGRILSEYAKTCLEEGKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDR 266
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: N-deacetylase/N-sulfotransferase ((Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 6.810e-11 Identity = 58/176 (32.95%), Postives = 89/176 (50.57%), Query Frame = 1
Query: 682 LRRYESFEAYATEQSASGNAILPVPIVRPPGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEK--KRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRD-----TMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
LRR+ESFE + E+S + + +P+V GK ++P II+G + GT L S L HP++ + E + DPE + EWPGD L S G++L +A V+ S+ + + T +P YF LAPYR+K+ +P ++V++LRDPT R
Sbjct: 126 LRRFESFEEF-VERSRAEDGPAAMPVVPLDGK----HVTLPSVIIVGARRSGTSTLFSMLSQHPAVGSMAPEPRPELSCGFMAQDPETFPQEAEWPGDNLEKE-LPASVLGKLLEEFARP--YTVSESRHEGVDAPNLVTTAVSPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNR 293
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: sulfotransferase (n=1 Tax=Alcanivorax sp. 1008 TaxID=2816853 RepID=UPI001DCEF52E) HSP 1 Score: 68.2 bits (165), Expect = 3.400e-9 Identity = 47/138 (34.06%), Postives = 64/138 (46.38%), Query Frame = 1
Query: 775 KVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
K R++P IIIGTQ GT +L +L HP L ++E H+FD GL P L R+ + R E++PLY F PLAP R+ +LP A+L+L+LR+PTER
Sbjct: 25 KFTAGGRALPSFIIIGTQKGGTTSLFHYLSQHPQLVPSYRKEVHYFD----------------------GGLKPKRDNFALGERWYRSNFPLRKHIRQGQQAFEASPLYVFHPLAPERIHALLPDAKLILLLREPTER 140
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: heparan (sulfate (glucosamine) 3-O-sulfotransferase 1-like1 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AE220A) HSP 1 Score: 63.9 bits (154), Expect = 1.100e-7 Identity = 49/145 (33.79%), Postives = 67/145 (46.21%), Query Frame = 1
Query: 754 PIVRPPGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
P+V PPG S+ +P +IIIG + GT+ L L HP + + E HFFDW + K +W + + P + TVE TP YF PLAP R++ + A+L+LILRDPTER
Sbjct: 48 PLVGPPG----TSKRVPQSIIIGVRKGGTRALLEMLDIHPDIV-VAATEVHFFDW----DENYAKGLDW--------------------------YRNLMPFSFEQQITVEKTPGYFTSPLAPERIRRMNGSAKLLLILRDPTER 157
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: sulfotransferase (domain-containing protein n=2 Tax=Acaryochloris marina TaxID=155978 RepID=UPI001BAFD6D8) HSP 1 Score: 63.5 bits (153), Expect = 1.270e-7 Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 790 SRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPS-DPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
SR++P +IIG Q GT +L +L H +S +E HFFD P D K+ W LS + RA K V K T +S+PLY F P+ P R+ ++P A+L+ ILR+PTER
Sbjct: 37 SRNLPDFMIIGAQKSGTSSLYYYLSQHSQISPSYVKEVHFFDGGLKPDFDNFKQGQSW-----------------YLSHF-PRAGKTVKNQK-----TFDSSPLYIFNPIVPKRISEIIPKAKLIAILRNPTER 147
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: Sulfotransferase (n=2 Tax=Elapidae TaxID=8602 RepID=A0A670YM97_PSETE) HSP 1 Score: 61.2 bits (147), Expect = 1.370e-7 Identity = 48/143 (33.57%), Postives = 64/143 (44.76%), Query Frame = 1
Query: 760 VRPPGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
VRPPG SR IP IIIG + GT+ L L HP++ + E HFFDW + K +W +++ P + T+E TP YF P AP R+ + +L+LILRDPTER
Sbjct: 46 VRPPG----TSRQIPQTIIIGVRKGGTRALLEMLDVHPNIV-VAATEVHFFDW----DENYVKGIDW--------------------------YRSLMPFSYENQITIEKTPGYFTSPQAPERIHDMNSSIKLLLILRDPTER 153
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Match: Sulfotransferase (n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QGE2_9TELE) HSP 1 Score: 62.4 bits (150), Expect = 3.420e-7 Identity = 51/153 (33.33%), Postives = 70/153 (45.75%), Query Frame = 1
Query: 730 SGNAILPVPIVRPPGKVPEASRSIPLAIIIGTQARGTQNLRSHLLTHPSLSGLRQEEAHFFDWFWFPSDPEKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVAPSKRDTMATVESTPLYFFFPLAPYRMKMVLPPARLVLILRDPTER 1188
S NA +P + PPG +S+ +P +IIIG + GT+ L L HP ++ E HFFDW + K +W Y D+ P T+E TP YF P+AP R+ + P +L+LILRDPTER
Sbjct: 34 SENASIPPSSLPPPG----SSKHMPHSIIIGVRKGGTRALLEMLDIHPEVTAAATE-VHFFDW----DENYFKGLQW---------------------YQDQM-----PYSFPNQITIEKTPGYFTSPVAPERIHAMNPSIKLLLILRDPTER 151 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10192.224.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10192.224.1 >prot_Ecto-sp9_F_contig10192.224.1 ID=prot_Ecto-sp9_F_contig10192.224.1|Name=mRNA_Ecto-sp9_F_contig10192.224.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=397bp SRAWLLPARCSPSAPRTASDHSSAEKKKRRPRGRGPPARPPPPPPLPLPRback to top mRNA from alignment at Ecto-sp9_F_contig10192:375..4555+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10192.224.1 ID=mRNA_Ecto-sp9_F_contig10192.224.1|Name=mRNA_Ecto-sp9_F_contig10192.224.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4181bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10192:375..4555+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10192:375..4555+ >mRNA_Ecto-sp9_F_contig10192.224.1 ID=mRNA_Ecto-sp9_F_contig10192.224.1|Name=mRNA_Ecto-sp9_F_contig10192.224.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2382bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10192:375..4555+ (Ectocarpus species9 EcSCA_722f female)back to top |