prot_Ecto-sp9_F_contig1015.184.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1015.184.1
Unique Nameprot_Ecto-sp9_F_contig1015.184.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length670
Homology
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK0_9PHAE)

HSP 1 Score: 1159 bits (2999), Expect = 0.000e+0
Identity = 631/670 (94.18%), Postives = 640/670 (95.52%), Query Frame = 0
Query:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTPKIGDPINFSEDSSAGVKQELGGGSNNN-TGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKYN 669
            MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDV+SGP PKIGDPINFSEDSSA VK ELGGGSNNN TGHY XX   XXXXXXXX DVKPKVANNPYGASNKQXXXX AGG     XXXXXXXXXXXX ARGGAANNPYA+RGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMR WNNARGSG LFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYEL FDSSTQINPINDDSRI SATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHA+F+S RAGKQLDKRNLILVDDTCTEINLTLWGDMAKADG RWEGNPVVAFKGVKLS++NGRSLNSLN+STLVNDPDVPETADLRAWFDAAGGGSSFKSVT XXXXXXXX   AKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYML+MQISDNTGKAWVTAFNDQ VELL NRTADELFQMKEEGNDAELEELFSEACFKTYM TLRVK DMYNDETRSRKTLQR+APVDVKAECAALLDAIAKYN
Sbjct:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPAPKIGDPINFSEDSSARVKPELGGGSNNNNTGHYGXXSKPXXXXXXXXRDVKPKVANNPYGASNKQXXXXXAGGGNNNYXXXXXXXXXXXX-ARGGAANNPYANRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELNFDSSTQINPINDDSRISSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAQFVS-RAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKLSEYNGRSLNSLNSSTLVNDPDVPETADLRAWFDAAGGGSSFKSVTVXXXXXXXXDEVAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLNMQISDNTGKAWVTAFNDQAVELLDNRTADELFQMKEEGNDAELEELFSEACFKTYMFTLRVKTDMYNDETRSRKTLQRMAPVDVKAECAALLDAIAKYN 668          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU1_ECTSI)

HSP 1 Score: 799 bits (2063), Expect = 2.880e-287
Identity = 410/420 (97.62%), Postives = 414/420 (98.57%), Query Frame = 0
Query:  250 MRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKYN 669
            MR WNNARGSG LFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEA+EANKVLDVIAVVKSVEDHA+F+S RAGKQLDKRNLILVDDTCTEINLTLWGDMAKADG RWEGNPVVAFKGVKLSDF+GRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELL NRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVK DMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKYN
Sbjct:    1 MRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEALEANKVLDVIAVVKSVEDHAQFVS-RAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKLSDFSGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLDNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKTDMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKYN 419          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ94_HETAK)

HSP 1 Score: 467 bits (1202), Expect = 1.480e-153
Identity = 285/679 (41.97%), Postives = 421/679 (62.00%), Query Frame = 0
Query:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTPKIGDPINFSEDSSAGVKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNS-------------GPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSR-AGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAI 665
            MANL S G+I QI+ G     G  PT+QV+++KK+  AG DR+RL++SDGQ++AQ MLATQ N ++SS +L+ELCI+ L++Y+VN VQ +R++I L ++V SGP PK+GDP N    SS G    +                              +            XXX Y  G XXXXXXXXXXXXXX     GG ++N     G++N+             GPV R++ ++ Y PI+++NPYQNRWTIKAR+TK+ D+R W+NARG G+L SVDLLD +G+EI+ T FK+D D+ ++ LQEG+V++F+GG++KVANK+++S   +YE+TF S T +    D++ I    ++FV +  +   +A  V D+IAVVKS  + +  +S +  GK+L KR+L LVD +  E+ LT+WG+ A A   +WE +PVVAFKG++ SD+ G SL+SLN++ ++ +PD+PE   L AW+   GG +                    ++ +Q   ++ I    +G GEKPD+A VKA +S+++ D    PWYT+CP + C KK+TE  +  W CEKCN+ +  C+ RY+LS +  + +G+ WV+AFND+  E++ N+TADEL Q++ EGND   E  F+ A F+ ++  LR+K + YND+ R + +L RL PVD   E   LL+AI
Sbjct:    1 MANLTS-GSIQQIVNGEV--TGLTPTLQVINVKKVQGAGADRFRLIISDGQYYAQCMLATQLNHLVSSNELQELCIVKLTNYVVNNVQGRRIVIGLAVEVVSGPVPKVGDPQN----SSGGPAPAM----------------------------PAQXXXXXXXXXXXXXXXPYQQGSXXXXXXXXXXXXXXSSNPYGGGSSNSXXXXGNTNTNTXXXXXXXTTSTGPVARENPNAQYQPIASLNPYQNRWTIKARVTKRSDIRRWSNARGEGHLASVDLLDAEGTEIRATMFKEDCDRLYERLQEGKVFSFSGGRLKVANKQYTSIKNDYEITFGSETVVEGPLDEAGIEQNKFSFVDIAALSP-DAGMV-DLIAVVKSAGELSTIISKKQGGKELQKRDLTLVDRSGAEVRLTVWGESALAQA-QWEHSPVVAFKGLRASDYGGVSLSSLNSTVVMINPDLPEGHALHAWWTQQGGATQQTRSLSAAGPGGSRWVTKVQNRAQLGVIKDIP--GIGAGEKPDYAEVKAMLSYMRHDNG--PWYTSCPNDDCKKKMTEGFDQKWSCEKCNKQYDRCKHRYVLSTRFIEASGQDWVSAFNDE-AEMILNKTADELQQLQSEGNDVAYEAAFAAANFQHFVAQLRIKQETYNDQARLKLSLIRLKPVDPVEESRMLLEAI 636          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X4_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 5.750e-146
Identity = 291/666 (43.69%), Postives = 404/666 (60.66%), Query Frame = 0
Query:    5 ISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGT--DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTPKIGDPINFSEDSSAGVKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKY 668
            +++GAI +I+  A+G  G+ P VQV+S+KKMT A    +R+R+V+SDGQH  QSML T QN++I+SG + E C+I L ++I+N +  K ++I+L+  V SG  PKIGDP  F               ++      XXXXXXXXXXX       P  A +    S++        G  XXXXXXXXXXXXXXXX         Y   G + SGPVQR    ++Y PIS +NPY NRWTIKAR+T K ++R W+N RG G L SVDLLDE G E++GTFFK   DK+  +L+   VY F+GG++KVANK++SS   +YE+TF+S + I  + DD RI +    F ++ +++ +E N  +D++AVV+  +D A  + ++  ++++KRN+ LVDD+  E+  TLWG  AK       G+PV A                  +ST+V  PD+ E   L  W+    G        XXXXXXXX       D++QR  +  I +  LG  EKPD+A +KA ++FIK D E  PWYTACP EGCNKKV E M+  W+CEKC++++P C+RRY+ S+ +SD+TG+ W +AFND    +L   +ADELF+ K  G D   E+ F EAC+K Y+L +RVKA+M NDE R + T+    PVD   E AAL+ AI  Y
Sbjct:    6 VTQGAIQRIIT-ASGQDGFLPIVQVLSIKKMTAAAGQGERYRVVVSDGQHHQQSMLTTSQNDLITSGQMVEGCLICLDEFILNQIGAKSIVIILRASVLSGAMPKIGDPTAFER-------------ADGXXXXXXXXXXXXXXXXTRATATAPLAALSSRWRSSR--------GRAXXXXXXXXXXXXXXXXXXXXXXXGGYGHSGGA-SGPVQRHDSGASYTPISDLNPYMNRWTIKARVTAKSEIRRWSNQRGEGYLASVDLLDEFGGEVRGTFFKDAVDKYLPMLEVNSVYTFSGGRIKVANKQYSSLQNDYEITFNSDSVIEKVADDKRIKAMNLTFRRIADLKDVEVNATIDILAVVRDFQDMA-MIMTKNNREVEKRNITLVDDSGAEVVCTLWGAHAKLPDDALRGSPVAAXXXXXXXXXXXXXXXXXXSSTVVLAPDLEEARALHNWWTRYAGXXXXXXXXXXXXXXXXPRSDPY-DVAQRLGVAGIKEEQLGLKEKPDYASLKAYVAFIKHDSENGPWYTACPTEGCNKKVVEEMDQGWRCEKCSRSYPNCRRRYIASLAMSDHTGQTWFSAFNDVAQPMLAQHSADELFEWKTSGQDELFEDTFVEACWKQYVLRVRVKAEMVNDEQRIKSTIVDAEPVDPVKESAALIRAIKAY 646          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TYW6_9STRA)

HSP 1 Score: 437 bits (1124), Expect = 8.920e-142
Identity = 271/677 (40.03%), Postives = 394/677 (58.20%), Query Frame = 0
Query:    5 ISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAG--TDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTPKIGDPINFSEDSSAG-VKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGA-----ANNP----YASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDP-DVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKY 668
            + RG + +I     G     P +QV+ ++K++NA   ++R+R+VLSDG+++  +MLATQQN +++SG LK   ++ L  Y+VN VQ KR++IL+  DV       +G P +    +SA    +    G+                         P     P       XXXX    XXXXXXXXXXXXXXX     GG      A  P    Y+S    NS PV R   D   MPI+A+N Y ++WTIKAR+T K  +R W+NARG G+LF+VDLLD  G EI+ TFFK   D++  +LQEG+VY F+GG++K+A K+++S   +YE+TFD +  I P +D+  I    Y F K+ ++E +     +D++AVVKS  +    +S +  K+L KR+L+LVDD+ TEI +TLWGD A+ DGG+W  NPV+A KGVK+SD+NGRSL+ L +S    D  D PE   LR W+ A  G     S++            A   ++QR  L +I D  LG   + ++  VK T++ ++ +G   PWYTA P+EG   KVTET EG W CE+  +T+  C+RR++LS+ ++D +G  WVTAFND    LLG +TADE ++M+  G++   +E FS+  FK  +  LRVK +  NDE R + ++  +  V+ K EC  L++ IAK+
Sbjct:    3 LDRGILRRI---DNGEMDLKPVLQVIHIRKISNANGPSERFRIVLSDGENYNTAMLATQQNGVVNSGALKVHSLVRLGYYMVNEVQGKRILILINFDVVGEAERILGKPQDLHSGASADKFDKNAAAGA-------------------------PPARPQPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAMPGGGEPARTAPKPEYGTYSSSMMGNSAPVARVESDDRIMPIAALNLYNSKWTIKARVTSKSAIRRWSNARGEGHLFNVDLLDGQGGEIRATFFKDACDRFEPLLQEGRVYTFSGGRLKLAKKEYTSIKNDYEITFDRNADIRPSDDEGGIKRIKYNFTKIGDIEKVAPGATIDLVAVVKSCGECNSIMSQKLSKELFKRDLVLVDDSNTEIQMTLWGDRAREDGGQWMSNPVIAVKGVKVSDYNGRSLSLLQSSNFSTDTTDSPEAGRLRQWWSANQGNVQTTSISAKSGGGGA----AGTSVAQRQPLSTIKDEGLGTKGETEYLAVKGTVTLLQTNGNNDPWYTAAPEEGVLFKVTETTEGQWFCERNGKTYDTCKRRFVLSLVLTDYSGNTWVTAFNDPAELLLGGKTADECYEMRARGDEQGYKECFSKGQFKQCIFKLRVKTEQLNDEQRVKTSIVTIRDVNYKEECRQLIEEIAKF 647          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Ustilago hordei (strain Uh4875-4) TaxID=1128400 RepID=I2FRR5_USTH4)

HSP 1 Score: 421 bits (1083), Expect = 6.600e-136
Identity = 256/680 (37.65%), Postives = 387/680 (56.91%), Query Frame = 0
Query:    3 NLISRGAINQIMGGATGAAGY-NPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTP-KIGDPINFSE--DSSAGVKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNSG-PVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKA--DGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXX-AKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKY 668
            N +S+GAI Q++  A  A    NP  Q++S+KK+  + T      DR+R++LSDG H+AQSMLA+Q+  M+ SG+L++ C++ +S Y  N VQN+R++ILL L+V+  PT  ++G P N  +   S  GVKQE  GG+ N  G+                     + NN  G +        AG                     GG A  P  S  S N+G P+          PI  ++PYQNRWTIKAR+T K D+R W+N RG G LFSV+LLD+ G EIK T F    D+++ +L+E  VY  +  KV +A K+FS+   EYE+TF++ST+I    D + +    Y FV++NE+E++E N+  DVI V+ S  + +E +S  + + + KR L LVD     + LTLWG  A+   +    +  PV+AFKGVK+ DF GRSL+  ++ST++ +PD+ E+  LR W+D  G  + F++ +             A  ++++R T+  + D NLG  EKPD+  ++AT+ +IK +     +YTACP +GCNKKVT   E  W+CEKC++++   + RY+LS  ++D TG+ W++ FN+   +L+G  +A EL Q++E  +++E       A  + Y+   R K D +ND+TR R T+ R APVD     A L+DAI  Y
Sbjct:    4 NDLSQGAIAQMIQTADPANSVQNPICQILSIKKIQASATSASNVGDRYRIILSDGVHYAQSMLASQKRSMVESGELEKHCLVRISQYASNSVQNRRILILLDLEVAHKPTADRLGSPTNVDDAIKSEGGVKQE--GGAGNALGN-------------------SNLGNNSAGRTTPATSAAGAGKI-------------------GGGAGRPGGS--SVNAGMPI---------YPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLDDSG-EIKATGFNDTVDRFYSLLKENHVYLISKAKVNIAKKQFSNLQNEYEITFENSTEIEECTDATDVPEVKYEFVRINELESVEPNQTCDVIGVLDSYGELSEIVSKASQRPVQKRELTLVDQGGKSVRLTLWGKNAETFPNNAGVDEKPVIAFKGVKVGDFGGRSLSMFSSSTMLINPDITESHVLRGWYDNDGARAQFEAFSNAGVGGGALGAAGAGGNMAERRTIAQVKDENLGMTEKPDYFNIRATVVYIKQENL---YYTACPSDGCNKKVTLDHENNWRCEKCDRSYEAPEYRYILSTNVADATGQIWLSGFNEDATKLIG-MSAGELHQLRE-NSESEYSAALHRAANRMYLFNCRAKMDTFNDQTRVRYTISRSAPVDFAKAGAELVDAIKVY 626          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XXN4_9BASI)

HSP 1 Score: 419 bits (1078), Expect = 3.690e-135
Identity = 262/679 (38.59%), Postives = 375/679 (55.23%), Query Frame = 0
Query:    5 ISRGAINQ-IMGGATGAAGYNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTP-KIGDPINFSEDSSAG-----VKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKA--DGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKY 668
            ++ GAI Q I    T     NP  Q++S+KK+    T      DR+R++LSDG H+AQ+MLA+Q+  M+ SG+L++ CI+ +  Y  N VQN+R++ILL L V SGP P ++G+PIN  E   AG     VKQE G                            P  A     A          GG    XXXXXXXXXXX        A  P                      PI  ++PYQNRWTIKAR+T K D+R W+N RG G LFSV+LLDE G EIK T F    D+++ +LQE  VY  +  +V +A K+FS+   EYE+TF++ T+I    D S +    Y FV++NE+E++E N+  DVI V+   ++ +E +S  + + + KR L LVD +   + LTLWG  A+   +    +  PV+AFKGVK+ DF GRSL+  ++ST+  +PD+ E   LR WFD  G  S FK  T               ++++R T+  + D N+G  EKPD+  V+AT+ +IK D     +YTACP +GCNKKVT+ M+G W+CEKC++++P  + RY+LS  ++D++G+ W++ FND   +L+G  TA EL Q++EE ++ E       A  + Y+   R K D +ND  R R T+ R  PVD       L++AI  Y
Sbjct:    6 LTHGAIAQMIQSSDTSNLVQNPVCQILSIKKIQATSTTAANVGDRYRIILSDGVHYAQAMLASQKRTMVESGELEKNCIVKVLQYAANSVQNRRILILLDLQVLSGPAPDRLGNPINVDEAQKAGGEAGPVKQESGA---------------------------PAAAA---AAGRTTPATSAFGGKPAAXXXXXXXXXXXRPGGSSIHAGMPI--------------------YPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGDGKLFSVNLLDESG-EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLTNEYEITFENQTEIEECTDASDVPEVKYEFVRINELESVEPNQTCDVIGVLDKYDELSEIVSKASQRPVQKRELSLVDQSGRSVRLTLWGKNAETFPNNAGVDEKPVIAFKGVKVGDFGGRSLSMFSSSTMTINPDIAEAHMLRGWFDNDGAHSEFKPYTNAGGSGGAAGGTG--NLAERRTIAQVKDENMGMSEKPDYFNVRATVVYIKQDNL---YYTACPSDGCNKKVTQDMDGNWRCEKCDRSYPAPEYRYILSTNVADSSGQMWLSGFNDDATKLIG-MTAGELHQLREE-SETEFAAALHRAANRMYVFNCRAKMDTFNDTARVRYTISRANPVDFAKAGLELVEAIRAY 626          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7F5_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 2.040e-132
Identity = 254/656 (38.72%), Postives = 376/656 (57.32%), Query Frame = 0
Query:   19 GAAGYNPTVQVVSLKKMT----NAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTP-KIGDPINFSEDSSAGVKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKYN 669
            G   ++P VQV+  K++       G  R+RL++SDG H+ Q+MLATQ N +I+ G + E  +I L ++I N VQ ++++I+L+  V S     ++GDP+ + +  +AG    + GG     G                   KP   ++  G+SN      Y  G                     GAA    A      SGPV R     + +PI+ +NPY NRW IKAR+T K D++ W+NA+G G LFSVDLLDE   EI+ TFFK+  +K++ +L++G VY F+GGK+K A +++SS    YE TFD++++I  + DD +I SA Y+F K+ E+E    N  +DVI VVK+    +   + + G++++KR L L DDT TE+ LT+WG+ A     +WE +P+VAFKGVK+SD+NGRSL ++  S +   PD+PE   L  W+ +AG      +  XXXXXXXXXXXX     + R  L  I +  LG GEKPD+  VKAT+++IK D +  PWY +C    C +KVTE +   + CEKC +  PEC  RY+L++  +D++G  +++ F++    LLG R+A+EL   K     A  +  F EA F T++L LRVKA+  NDE R + T+  + PV++  E   L+ AI  YN
Sbjct:   62 GQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGK--AAGGNGGMQGGQPV-YGQQPQQAPALNTMAGASVPYKP-AGSSSAGSSNAGAYPPYNSG---------------------GAAGGYRAP-----SGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGA-----TXXXXXXXXXXXXXXXXXXFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIKSDPD--PWYRSCTSPDCKRKVTEQLNSYF-CEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILLG-RSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A061HBD0_9BASI)

HSP 1 Score: 407 bits (1047), Expect = 1.240e-130
Identity = 239/679 (35.20%), Postives = 368/679 (54.20%), Query Frame = 0
Query:    5 ISRGAINQIMGGATGAAGY-NPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTP-KIGDPINFSEDS-----SAGVKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAK--ADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKY 668
            +++GAI +++     + G  NP  Q++S+KK+++  T      DR+R++LSDG HFAQ+MLA+Q+ +M  +G++    ++ +  Y  N VQN+R++ILL L+V  GPTP ++G P    + +      A VKQE G  +                        KP +   P G+S       Y                                                    PI  ++PYQN+WTIKAR+T K D+R W+N RG G LFSV LLDE G EIK T F    D+++ +LQE +VY  +  KV +A K+FS+ + EYE+ F++ST+I    D S +    Y FV ++++E +E N+  DVI V++S  + +E +S  + + + KR L LVD +   + LT+WG  A+        +  PV+A KGVK+ DF GRSL+   +ST++ +PD+PE+  LR W+D  G  ++FK  +            A  ++++R ++  + D NLG  EKPD+  ++ATI +IK D     WYTACP + CNKKV +  +G W+CEKC+++  E Q RY+LS  ++D +G+ W++ FND   +++G +TA EL+Q++EE N++E   +   A  + YM   R K D +ND TR R T+ R APVD       L +AI  Y
Sbjct:    6 LTQGAIARMVESTDTSNGVQNPVCQILSIKKISSTSTANPNVGDRYRIILSDGVHFAQAMLASQKRQMAENGEIDRNSVVRVLQYSSNNVQNRRILILLDLEVIGGPTPERLGAPKALEDQARPAGAGAPVKQENGATA-------PATSYGGAGAGASAGSTKPAMGGRPGGSSMNAGLPIY----------------------------------------------------PIEGLSPYQNKWTIKARVTSKSDIRHWSNQRGEGKLFSVKLLDESG-EIKATGFNDAVDRFYGLLQENKVYLISKAKVSIAKKQFSNLSNEYEIMFENSTEIEECTDASDVPEVKYEFVPIDQLENVEPNQTCDVIGVLESYGEVSEIVSKASQRPVSKRELTLVDQSGRSVRLTMWGKSAENFPQNQGVDDKPVIAVKGVKVGDFGGRSLSMFGSSTMMVNPDIPESHGLRGWYDNDGATANFKPYSNVGMAGAGGAG-AGGNLAERRSIAQVRDENLGMSEKPDYFNIRATIVYIKQDNL---WYTACPSDSCNKKVNQENDGLWRCEKCDKSFEEPQYRYLLSTNVADMSGQMWLSGFNDDAEQIIG-KTASELYQIREE-NESEYTAVLHRAANRMYMFNCRAKQDTFNDTTRVRYTISRAAPVDFAKAGHELAEAIKAY 618          
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Match: Replication (protein A subunit n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JN56_9EUKA)

HSP 1 Score: 405 bits (1041), Expect = 4.330e-129
Identity = 257/663 (38.76%), Postives = 373/663 (56.26%), Query Frame = 0
Query:   19 GAAGYNPTVQVVSLKKMTNAGT---DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVSSGPTPKIGDPINFSEDSSAGVKQELGGGSNNNTGHYXXXXXXXXXXXXXXXDVKPKVANNPYGASNKQXXXXYAGGXXXXXXXXXXXXXXXXXXARGGAANNPYASRG-SSNSGPVQRQSQDSAY----MPISAINPYQNRWTIKARITKKGDMRTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFS-SFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGGRWEG------NPVVAFKGVKLSDFNGRSLNSLNASTLVNDPD-VPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLAPVDVKAECAALLDAI 665
            G A   P +QV+ +K++ N G    DR+RL LSDG  F QSMLATQ N+++++G+L++ C++ L+++I NVVQN+++II L + V SGP P IG+P     +S       + GG  NN G Y                V P   N         XXXX    XX                 R  AA  P  S G  SN G    +++ S       PISA+NPY NRWTIKAR+T KGD++T++NARGSG + +V  LDE+G EI+ T F    DK   + +   VY  + G +K ANK+FS     EYE+T D    +  I+DD  IGS  ++FVK++++E +  N+V+DVI VV  +   +E  +   G QL +RNL L DD+   + LTLWGD  KA+  +W+        P++A + V++SDFNGRSL+S + S L  DPD + E   LR WFD+        SV+             +   ++R  L +I D +LGN +K D    KAT+ FIK D     WY +CP + C KKVT      W+CEKC++++   + RYMLS+ ++D+T   WV+AF D G ++LG  TAD+L  +KE  N AE + +FSEA FK+Y+  ++ K + YNDE+R + ++  + P+D ++E   +LD+I
Sbjct:   20 GHAEKQPLLQVLDVKRIGNPGAPQGDRYRLQLSDGVFFTQSMLATQLNDLVANGELQQHCVVQLTEHICNVVQNRKIIIALGMIVKSGPVPVIGNPRQL--ESPPITSDGVTGG--NNPGQYQQNNPKSSFQQSSYQSV-PGNQNQXXXXXXXXXXXXXXXXXXSHNNPSNRQMPNSAPQQRNAAAVAPSYSGGMQSNRGASIAKAEGSLQGIPLTPISALNPYNNRWTIKARVTNKGDIKTYSNARGSGKILNVVFLDEEGGEIRATMFNDTVDKLNPVFELNGVYLVSKGTLKPANKQFSRGIKHEYEMTLDDRATVERISDDPSIGSMKWSFVKISQIEQINNNEVVDVIGVVIDIGHRSEITTKSKGNQLSRRNLKLADDSDCSVELTLWGD--KAEDQQWDDFMAQKHTPILACRHVRVSDFNGRSLSSTSDSGLFVDPDNIAEAGSLRFWFDSRNPTQHLSSVSSAGG--------GRGGQAERKLLSAIKDEDLGNKDKADVFSAKATVVFIKHDSAC--WYPSCPDDSCKKKVTGDENNGWRCEKCDKSYDRPKYRYMLSLSLNDSTAGCWVSAFGDDGTKILG-LTADDLQALKE-NNPAEYDRVFSEALFKSYIFKIKAKMETYNDESRVKLSVLAIDPMDFRSETTRMLDSI 663          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1015.184.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Replication0.000e+094.18protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
Replication2.880e-28797.62protein A subunit n=1 Tax=Ectocarpus siliculosus T... [more]
Replication1.480e-15341.97protein A subunit n=1 Tax=Heterosigma akashiwo Tax... [more]
Replication5.750e-14643.69protein A subunit n=1 Tax=Tribonema minus TaxID=30... [more]
Replication8.920e-14240.03protein A subunit n=1 Tax=Pinguiococcus pyrenoidos... [more]
Replication6.600e-13637.65protein A subunit n=1 Tax=Ustilago hordei (strain ... [more]
Replication3.690e-13538.59protein A subunit n=1 Tax=Testicularia cyperi TaxI... [more]
Replication2.040e-13238.72protein A subunit n=1 Tax=Nannochloropsis gaditana... [more]
Replication1.240e-13035.20protein A subunit n=2 Tax=Pseudozyma flocculosa Ta... [more]
Replication4.330e-12938.76protein A subunit n=1 Tax=Cyanoptyche gloeocystis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 224..334
e-value: 9.7E-39
score: 133.8
NoneNo IPR availableGENE3D2.40.50.140coord: 474..669
e-value: 1.6E-65
score: 222.0
NoneNo IPR availableGENE3D2.40.50.140coord: 335..473
e-value: 5.5E-34
score: 118.7
NoneNo IPR availableGENE3D2.40.50.140coord: 4..116
e-value: 1.1E-31
score: 111.1
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 25..662
NoneNo IPR availablePANTHERPTHR23273:SF4REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNITcoord: 25..662
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 238..323
e-value: 1.2E-9
score: 38.0
IPR013955Replication factor A, C-terminalPFAMPF08646Rep_fac-A_Ccoord: 511..660
e-value: 1.5E-46
score: 157.7
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 5..100
e-value: 1.1E-23
score: 83.2
IPR004591Replication factor A protein 1TIGRFAMTIGR00617TIGR00617coord: 206..667
e-value: 5.3E-153
score: 508.7
IPR031657Replication protein A, OB domainPFAMPF16900REPA_OB_2coord: 347..444
e-value: 1.1E-27
score: 95.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 225..335
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 491..668
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 342..462
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1015contigEcto-sp9_F_contig1015:1491..11674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1015.184.1mRNA_Ecto-sp9_F_contig1015.184.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1015 618..11674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1015.184.1 ID=prot_Ecto-sp9_F_contig1015.184.1|Name=mRNA_Ecto-sp9_F_contig1015.184.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=670bp
MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDG
QHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDV
SSGPTPKIGDPINFSEDSSAGVKQELGGGSNNNTGHYGGGSKPNTGGYGA
GQDVKPKVANNPYGASNKQANNPYAGGGNNNNYGGGGGNYGGGGGARGGA
ANNPYASRGSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDM
RTWNNARGSGNLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFT
GGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEM
EAMEANKVLDVIAVVKSVEDHAEFLSSRAGKQLDKRNLILVDDTCTEINL
TLWGDMAKADGGRWEGNPVVAFKGVKLSDFNGRSLNSLNASTLVNDPDVP
ETADLRAWFDAAGGGSSFKSVTVRNGGGGGGDEAAKKDISQRYTLQSITD
GNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGA
WQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLGNRTADE
LFQMKEEGNDAELEELFSEACFKTYMLTLRVKADMYNDETRSRKTLQRLA
PVDVKAECAALLDAIAKYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004365NA-bd_OB_tRNA
IPR013955Rep_factor-A_C
IPR007199Rep_factor-A_N
IPR004591Rfa1
IPR031657REPA_OB_2
IPR012340NA-bd_OB-fold