prot_Ecto-sp9_F_contig9971.18037.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9971.18037.1
Unique Nameprot_Ecto-sp9_F_contig9971.18037.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length72
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9971.18037.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGZ6_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.470e-10
Identity = 41/56 (73.21%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:   19 PHPLSARSSVPGTVGVKRSH--VSKPSASQPGQAAGPPVTAARRAKKDVKLVSAAT 72
            P   S R S   TVGVKRSH  VSKP+ASQPG+AAGPPVTAAR AKK  KLVSAAT
Sbjct:  430 PSHSSGRPSSRKTVGVKRSHSTVSKPAASQPGEAAGPPVTAARGAKKGGKLVSAAT 485
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BLAST of mRNA_Ecto-sp9_F_contig9971.18037.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL43_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.140e-6
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:   31 TVGVKRSH--VSKPSASQPGQAAGPPVTAARRAKKDVKLVSAAT 72
            TVGVKRS   VSKP+A+QPGQAA P +TAARRAKK  KLVSAAT
Sbjct:   48 TVGVKRSPSTVSKPAATQPGQAARPTLTAARRAKKGGKLVSAAT 91
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9971.18037.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.470e-1073.21protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.140e-677.27protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9971contigEcto-sp9_F_contig9971:4352..4567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9971.18037.1mRNA_Ecto-sp9_F_contig9971.18037.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9971 4352..4568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9971.18037.1 ID=prot_Ecto-sp9_F_contig9971.18037.1|Name=mRNA_Ecto-sp9_F_contig9971.18037.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=72bp
VERVLKRTTSAKHMLLFTPHPLSARSSVPGTVGVKRSHVSKPSASQPGQA
AGPPVTAARRAKKDVKLVSAAT
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