prot_Ecto-sp9_F_contig9947.18012.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9947.18012.1
Unique Nameprot_Ecto-sp9_F_contig9947.18012.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length102
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9947.18012.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU3_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.130e-34
Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0 
Query:    1 MPGGTHNRRRNHGHQGTDAAAATSAENETSGRAAGAPQVAQAATLVVPDLGVGGVSGSSEVVPAAAXXXXXXXXXXXXXXXXXDLENAAAGAGGRKGNRSE 101
            MPGGTH+RRR+HGHQGTDAAA TSAENETSGRAAG PQVAQAATLVVPDLGVGGVSGSS+VVPAAAXXXXXXXXXXXXXXXXX LENAAAGAGGRK NRSE
Sbjct: 1087 MPGGTHHRRRSHGHQGTDAAANTSAENETSGRAAGGPQVAQAATLVVPDLGVGGVSGSSDVVPAAAXXXXXXXXXXXXXXXXXXLENAAAGAGGRKANRSE 1187
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BLAST of mRNA_Ecto-sp9_F_contig9947.18012.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW2_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 9.560e-14
Identity = 48/77 (62.34%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:   25 AENETSGRAAGAPQVAQAATLVVPDLGVGGVSGSSEVVPAAAXXXXXXXXXXXXXXXXXDLENAAAGAGGRKGNRSE 101
            AENETSGR  G PQVAQAATLVVPD GVGGV GSSE VP AA                  LEN AA AGGR+G RSE
Sbjct: 1100 AENETSGRVVGGPQVAQAATLVVPDPGVGGVPGSSEAVPPAAAESSGSGRGKGSSAPAH-LENTAADAGGRRGIRSE 1175
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9947.18012.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.130e-3493.07protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.560e-1462.34protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9947contigEcto-sp9_F_contig9947:2123..2428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9947.18012.1mRNA_Ecto-sp9_F_contig9947.18012.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9947 1975..4122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9947.18012.1 ID=prot_Ecto-sp9_F_contig9947.18012.1|Name=mRNA_Ecto-sp9_F_contig9947.18012.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=102bp
MPGGTHNRRRNHGHQGTDAAAATSAENETSGRAAGAPQVAQAATLVVPDL
GVGGVSGSSEVVPAAAAAESSGSGRGRGSSAPADLENAAAGAGGRKGNRS
E*
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