prot_Ecto-sp9_F_contig9943.18009.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9943.18009.1
Unique Nameprot_Ecto-sp9_F_contig9943.18009.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length282
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9943.18009.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN9_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 2.110e-130
Identity = 261/283 (92.23%), Postives = 264/283 (93.29%), Query Frame = 0 
Query:    1 MRRPRAFTCSKLKAEPLPPPTRKPLGYALTSATTSVQASSSPCKCGKCGESPAAASSXXXXXXXXXXXXXSSRVREATSAGGQGSRTPPLAEALGPSNNGSPATAGRPRFRRLPRNAHLPRRSVFNNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRKRGSDRGEPRLRRMQGARHRRQRRFLDGLIFIQSSLRPTPPARGRLTKQGSTANGEEIPGTFLARSARPREEAGDVGYTAVAGKSIKWIYLKSD--RAATRDEDLPVFCSTTGW 281
            MRRPRAFTCSKLKAEPLPPPTRKPLGYALT ATTSVQASSSPCKCGKCGESP AAS XXXXXXXXXXXX SSR+REATSAGGQGSR PPLAEALGPSNNGSPATAGRPRFRRLPRNAHLPRRSVFNNP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DQRKRGSDRG   LRRMQGARHRRQRRFLDGL+FIQSSLRPTPPA GRLTKQ STANGEEIPGTFL RSARPREE GDVGYT VAGKSI WIYLK+D  RAATRDEDLPVFCSTT W
Sbjct:    1 MRRPRAFTCSKLKAEPLPPPTRKPLGYALTPATTSVQASSSPCKCGKCGESPTAASXXXXXXXXXXXXXSSSRIREATSAGGQGSRAPPLAEALGPSNNGSPATAGRPRFRRLPRNAHLPRRSVFNNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DQRKRGSDRG---LRRMQGARHRRQRRFLDGLVFIQSSLRPTPPASGRLTKQASTANGEEIPGTFLTRSARPREETGDVGYT-VAGKSIDWIYLKNDNDRAATRDEDLPVFCSTTRW 278
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9943.18009.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ16_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 6.050e-61
Identity = 159/179 (88.83%), Postives = 161/179 (89.94%), Query Frame = 0 
Query:    1 MRRPRAFTCSKLKAEPLPPPTRKPLGYALTSATTSVQASSSPCKCGKCGESPAAASSXXXXXXXXXXXXXSSRVREATSAGGQGSRTPPLAEALGPSNNGSPATAGRPRFRRLPRNAHLPRRSVFNNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRKRGSDRGEPR 179
            MRRPRAFTCSKLKAEPLPPPTRKPLGYALTSATTSVQASS PC+CGKCGESPAAASSXXXXXXXXXXXX SSR+REAT AGG GSRTP LAEALGPSNNGSPATAGRPRFRRLPRNAHLPRRSV NNP            XXXXXXXXXXXXXXXXXXXXXXXXXXDQRKRGSDRGEPR
Sbjct:    1 MRRPRAFTCSKLKAEPLPPPTRKPLGYALTSATTSVQASS-PCQCGKCGESPAAASSXXXXXXXXXXXXSSSRIREATFAGGHGSRTPLLAEALGPSNNGSPATAGRPRFRRLPRNAHLPRRSVLNNPPQLPAPPSTSLLXXXXXXXXXXXXXXXXXXXXXXXXXXDQRKRGSDRGEPR 178
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9943.18009.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.110e-13092.23protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.050e-6188.83protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9943contigEcto-sp9_F_contig9943:142..1920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9943.18009.1mRNA_Ecto-sp9_F_contig9943.18009.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9943 142..1920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9943.18009.1 ID=prot_Ecto-sp9_F_contig9943.18009.1|Name=mRNA_Ecto-sp9_F_contig9943.18009.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=282bp
MRRPRAFTCSKLKAEPLPPPTRKPLGYALTSATTSVQASSSPCKCGKCGE
SPAAASSSSPASSSSSQSPSSSRVREATSAGGQGSRTPPLAEALGPSNNG
SPATAGRPRFRRLPRNAHLPRRSVFNNPPPLPAPPSTSLLAAGGGELEEQ
GEERAGGLLVPPPPPSDQRKRGSDRGEPRLRRMQGARHRRQRRFLDGLIF
IQSSLRPTPPARGRLTKQGSTANGEEIPGTFLARSARPREEAGDVGYTAV
AGKSIKWIYLKSDRAATRDEDLPVFCSTTGW*
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