prot_Ecto-sp9_F_contig9917.17985.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9917.17985.1
Unique Nameprot_Ecto-sp9_F_contig9917.17985.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length46
Homology
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM04_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.950e-19
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGPPVREFSGPDKTL 45
            +VRKVNDKLFIGLGY+QAFGGKYNSAPFVMEGPPV EFS PDK+L
Sbjct:  305 EVRKVNDKLFIGLGYIQAFGGKYNSAPFVMEGPPVGEFSSPDKSL 349          
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Match: Uncharacterized (protein n=2 Tax=Syntrophaceae TaxID=213468 RepID=A0A091ALL0_9DELT)

HSP 1 Score: 50.8 bits (120), Expect = 3.610e-7
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGPPVREFSGPDK 43
            ++RK+ND LF+GLGYM   GGK N APF + GP  +E+ G D+
Sbjct:   34 EIRKINDNLFLGLGYMALGGGKINPAPFALIGP-AKEWVGVDQ 75          
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-9 TaxID=2013759 RepID=A0A2N2F743_9DELT)

HSP 1 Score: 50.4 bits (119), Expect = 4.070e-6
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGPPVREFSGPDK 43
            ++RK+ND LFIGLGYM   GGK N APF++ GP  + + G DK
Sbjct:  162 ELRKINDNLFIGLGYMALGGGKINPAPFLVIGPATK-WVGTDK 203          
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A847ZAA1_9DELT)

HSP 1 Score: 48.9 bits (115), Expect = 1.640e-5
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    1 QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGP 33
            ++R++ND+LF+GLGYM   GGK N APF + GP
Sbjct:  173 EIRRINDRLFLGLGYMALGGGKINPAPFALVGP 205          
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) TaxID=96561 RepID=A8ZZW4_DESOH)

HSP 1 Score: 48.5 bits (114), Expect = 2.280e-5
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGPPVREFSGPD 42
            +VRKVND+L++G+G +    GKYN  PFV+ GPP   ++GPD
Sbjct:  166 EVRKVNDRLYLGIGRLTVTFGKYNPMPFVLIGPPG-PWTGPD 206          
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3N5IIR5_9DELT)

HSP 1 Score: 47.4 bits (111), Expect = 6.050e-5
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGPPVREFSGPD 42
            ++RK+N+ LFIG+GYM   GG  N APFV+ GP  +E+ G D
Sbjct:  173 EIRKINNHLFIGIGYMGLGGGSINPAPFVLIGP-AKEWVGVD 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9917.17985.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized1.950e-1988.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.610e-753.49protein n=2 Tax=Syntrophaceae TaxID=213468 RepID=A... [more]
Uncharacterized4.070e-655.81protein (Fragment) n=1 Tax=Deltaproteobacteria bac... [more]
Uncharacterized1.640e-557.58protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=... [more]
Uncharacterized2.280e-552.38protein n=1 Tax=Desulfococcus oleovorans (strain D... [more]
Uncharacterized6.050e-552.38protein n=1 Tax=Deltaproteobacteria bacterium TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9917contigEcto-sp9_F_contig9917:3886..4023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9917.17985.1mRNA_Ecto-sp9_F_contig9917.17985.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9917 3886..4023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9917.17985.1 ID=prot_Ecto-sp9_F_contig9917.17985.1|Name=mRNA_Ecto-sp9_F_contig9917.17985.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=46bp
QVRKVNDKLFIGLGYMQAFGGKYNSAPFVMEGPPVREFSGPDKTL*
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