prot_Ecto-sp9_F_contig9895.17966.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9895.17966.1
Unique Nameprot_Ecto-sp9_F_contig9895.17966.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length372
Homology
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL8_ECTSI)

HSP 1 Score: 686 bits (1769), Expect = 2.430e-236
Identity = 365/372 (98.12%), Postives = 368/372 (98.92%), Query Frame = 0
Query:    1 MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNISLNASFASIMEGLGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAVDASGGGGSKRADPVSSEDEFMDALSHHSGAEDEGESNGDALRQATAGLEEKESAPVAPAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFEDVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYCLLGEAAAVRHSPMLLKVALCEDEATGVRACAMQ 372
            MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQN+SLNASFASIMEGLGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAV++SGGG SKRADP SSEDEFMDALSHHSGAE EGESNGDALRQATAGLEEKES PVAPAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFEDVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYCLLGEAAAVRHSPMLLKVALCEDEATGVRACAMQ
Sbjct:  308 MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNVSLNASFASIMEGLGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAVESSGGG-SKRADPPSSEDEFMDALSHHSGAEGEGESNGDALRQATAGLEEKESTPVAPAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFEDVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYCLLGEAAAVRHSPMLLKVALCEDEATGVRACAMQ 678          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W1_9PHAE)

HSP 1 Score: 606 bits (1563), Expect = 4.300e-206
Identity = 331/372 (88.98%), Postives = 335/372 (90.05%), Query Frame = 0
Query:    1 MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNISLNASFASIMEGLGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAVDASGGGGSKRADPVSSEDEFMDALSHHSGAEDEGESNGDALRQATAGLEEKESAPVAPAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFEDVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYCLLGEAAAVRHSPMLLKVALCEDEATGVRACAMQ 372
            MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQ                            DVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVS QN+SLNASFASIMEGLGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAV+ SGGG SKRADP SSEDEFMDALSHHSGAED GESNGDALRQ TAGLEEKE+ PVA AGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFEDVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKY LLGEAAAVRHSPMLLK+ALCEDEATGVRACAMQ
Sbjct:  287 MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQ----------------------------DVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSPQNVSLNASFASIMEGLGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGKAVETSGGG-SKRADPASSEDEFMDALSHHSGAEDAGESNGDALRQVTAGLEEKETVPVALAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFEDVIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYSLLGEAAAVRHSPMLLKIALCEDEATGVRACAMQ 629          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Nuclear (condensing complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU77_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 9.050e-19
Identity = 58/122 (47.54%), Postives = 84/122 (68.85%), Query Frame = 0
Query:    1 MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISD 122
            +SA ++E RL TIL +T  LC  +E VAQ+  + + + +G        Q+F+L+Q+LK+A   DF+EEAGR RLVTLL+ LLLD       VE +M ALA+A+ S+ +FVR+VAEL+SD+S+
Sbjct:  407 LSAADREERLGTILPETPHLCAFVEAVAQQ--DGLQESLG--------QLFILQQMLKMARMVDFSEEAGRHRLVTLLRALLLDPFSPSDLVEVAMRALASANPSKGEFVRVVAELISDLSE 518          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=2 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A180G8M0_PUCT1)

HSP 1 Score: 65.5 bits (158), Expect = 8.200e-8
Identity = 41/143 (28.67%), Postives = 78/143 (54.55%), Query Frame = 0
Query:    7 ETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVE------------YQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNI 137
            ET+L+ ++     L  ++E   Q + EL+    G + +++E             + FVL +LL +A  AD+ +E+GRR++ +LL+DL+ D  + H  +   +  L+   T E DF+R++ ELV ++   + T P N  +++N+
Sbjct:  448 ETKLDEVMPVVTALAFRMEHNFQALTELLQSVEGLSPSQIEDEETAEKVQLAAQKTFVLRELLTVAMLADYGDESGRRKMFSLLRDLVSDQLLPHSLIPGCLEVLSKLSTGERDFMRVIVELVQELRCNLDTDP-NFTTSKNV 589          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=6 Tax=Puccinia TaxID=5296 RepID=E3JQ75_PUCGT)

HSP 1 Score: 63.2 bits (152), Expect = 4.510e-7
Identity = 41/143 (28.67%), Postives = 77/143 (53.85%), Query Frame = 0
Query:    7 ETRLETILTDTMTLCGQIE-------VVAQEVKELVSKDVGDNDARVEYQV-----FVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNI 137
            ET+L+ ++     L  ++E        + Q V++L    + D +   + Q+     FVL +LL +A  AD+ +E GRR++ +LL+DL+ D  + H  +   +  L+   T E DF+R++ ELV ++   + T P N  +++N+
Sbjct:  453 ETKLDEVMPVVTALAFRMEHNFQALTELLQTVEQLSPSQMEDEETAEKVQLAAQKTFVLRELLTVAMLADYGDEIGRRKMFSLLRDLVSDPLLPHSLIPGCLEVLSKLSTGERDFMRVIVELVQELRCNLDTDP-NFTTSKNV 594          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=3 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5SYE0_9BASI)

HSP 1 Score: 62.8 bits (151), Expect = 5.990e-7
Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 0
Query:    7 ETRLETILTDTMTLCGQIEVVAQEVKELVS-------KDVGDNDARVEYQV-----FVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNISLNASFASIMEGLGDVGDGTPNRSF 162
            ET+L+ ++     L  ++E   Q + EL+          + D +   + Q+     FVL +LL +A  AD+ +E GRR++ +LL+DL+ D  + H  +   +  L+   T E DF+R++ ELV ++   + T P N  +++N+  N   A       +  +G    SF
Sbjct:  456 ETKLDEVMPVVTALAFRMEHNFQALTELLHAIEQLSPSQMEDEEPAEKVQLAAQKTFVLRELLTVAMLADYGDEIGRRKMFSLLRDLVSDPLLPHSLIPGCLEVLSKLSTGERDFMRVIVELVQELRCNLDTDP-NFATSKNVDGNPDGAEDXXXXSEPDEGAGEASF 622          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R8F9_MELLP)

HSP 1 Score: 60.5 bits (145), Expect = 3.250e-6
Identity = 40/136 (29.41%), Postives = 70/136 (51.47%), Query Frame = 0
Query:    5 EKETRLETILTDTMTLCGQIE---VVAQEVKELVSK----DVGDNDARV-----EYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRP 128
            + E RL+ ++     L  +IE       E  EL+SK    D+ D + +      E + FVL++LL +A  AD+ +E GRR++ +LL+DL++D  +    +   +  L    T E DF+R++ E V ++   +   P
Sbjct:  446 QDEARLDQVMPVVTALAFRIEHNFTALSEALELISKTSSTDMADEETQEIVRKGEAKTFVLKELLSVAMLADYGDETGRRKMFSLLRDLIVDQLLPLPLIAGCLEILLKLSTGERDFMRVIVESVQELRGNLEADP 581          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGI3_PYTOL)

HSP 1 Score: 60.1 bits (144), Expect = 4.350e-6
Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   50 VFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALA---AAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQ 135
            +FVL+QLL+L    D+ +E GRR L+  L  +L D++M    + S M  +A   A   S+ DFVR+VAE++SD+ D + +    D + +
Sbjct:  427 IFVLQQLLELGRSLDYQDEFGRRLLLDALAKILRDLEMDSQLIPSVMELMAHIYALDNSQNDFVRVVAEIISDLYDPVDSMDDEDKTNE 515          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6UZE6_9BASI)

HSP 1 Score: 60.1 bits (144), Expect = 4.410e-6
Identity = 39/134 (29.10%), Postives = 70/134 (52.24%), Query Frame = 0
Query:    7 ETRLETILTDTMTLCGQIEVVAQEVKELVS-------KDVGDNDARVEYQV-----FVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRP 128
            ET+L+ ++     L  ++E   Q + EL+          + D +   + Q+     FVL +LL +A  AD+ +E GRR++ +LL+DL+ D  + H  +   +  L+   T E DF+R++ ELV ++   + T P
Sbjct:  450 ETKLDEVMPVVTALAFRMEHNFQALTELLHTVEQLSPSQMEDEETAEKVQLAAQKTFVLRELLTVAMLADYGDEIGRRKMFSLLRDLVSDPLLPHSLIPGCLEVLSKLSTGERDFMRVIVELVQELRCNLDTDP 583          
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Match: Cnd3 (domain-containing protein (Fragment) n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PNE5_9ASCO)

HSP 1 Score: 58.9 bits (141), Expect = 8.910e-6
Identity = 30/84 (35.71%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   51 FVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVST 134
            FV+EQLL +    DF++E GRR++++LL+++L + ++    +E S+  L     +E DF +++ E++SDI D   T P +D  T
Sbjct:  386 FVVEQLLIICETLDFSDEVGRRKMLSLLRNILTEDNVGDKIIEKSVQVLRKVTVNERDFSQVLTEIISDIQD---TLPADDDQT 466          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9895.17966.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
Cnd32.430e-23698.12domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Cnd34.300e-20688.98domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Nuclear9.050e-1947.54condensing complex subunit n=1 Tax=Tribonema minus... [more]
Cnd38.200e-828.67domain-containing protein n=2 Tax=Puccinia tritici... [more]
Cnd34.510e-728.67domain-containing protein n=6 Tax=Puccinia TaxID=5... [more]
Cnd35.990e-727.38domain-containing protein n=3 Tax=Puccinia coronat... [more]
Cnd33.250e-629.41domain-containing protein n=1 Tax=Melampsora laric... [more]
Uncharacterized4.350e-637.08protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Cnd34.410e-629.10domain-containing protein n=1 Tax=Puccinia sorghi ... [more]
Cnd38.910e-635.71domain-containing protein (Fragment) n=1 Tax=Nadso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027165Condensin complex subunit 3PANTHERPTHR14418CONDENSIN COMPLEX SUBUNIT 3-RELATEDcoord: 3..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9895contigEcto-sp9_F_contig9895:306..4429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9895.17966.1mRNA_Ecto-sp9_F_contig9895.17966.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9895 306..4435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9895.17966.1 ID=prot_Ecto-sp9_F_contig9895.17966.1|Name=mRNA_Ecto-sp9_F_contig9895.17966.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=372bp
MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSKDVGDNDARVEYQV
FVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALA
AAHTSEADFVRIVAELVSDISDLIHTRPTNDVSTQNISLNASFASIMEGL
GDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPMACMSEEGGK
AVDASGGGGSKRADPVSSEDEFMDALSHHSGAEDEGESNGDALRQATAGL
EEKESAPVAPAGDSEQDMRRLFRILDILSVLLSKTKRTLARDATLTAFED
VIMDVFKWTAEVLPTLIPDLQYFGPTLREQAVQTLGKYCLLGEAAAVRHS
PMLLKVALCEDEATGVRACAMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027165CND3