prot_Ecto-sp9_F_contig9812.17901.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: DEAD/DEAH (box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI) HSP 1 Score: 403 bits (1036), Expect = 4.460e-130 Identity = 224/259 (86.49%), Postives = 232/259 (89.58%), Query Frame = 0
Query: 56 MGGDDGLQSAGAPSESRRLELRFPQKNTAGTGKAKVSKRLQLVHGGTSDSAAAAVDWREDRDQRARSGGALNPSAKGKRRSGAGGAGSEGGGKEDEGPPGAEDGAAE-LRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
MGG+DGLQSAG P ESRRLELRFPQKNTA GGTSD AAAAV WRE+RDQRARSGGALNPSAKGKR G G AGSEGGGK+DEGPPGAE+GAAE LRFDPLR LEYLKSLPIYEDQAVYSETLPGR+GEYEDTLRPLH E+KAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVI+AIVG RPDAVALYLFPTKALAQDQLRSLKELVGASPYLS+RVRPMTLDGDTPFRE
Sbjct: 1 MGGNDGLQSAGPPCESRRLELRFPQKNTA--------------DGGTSDRAAAAVGWRENRDQRARSGGALNPSAKGKRPRGEGRAGSEGGGKQDEGPPGAEEGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRSGEYEDTLRPLHPELKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIDAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSQRVRPMTLDGDTPFRE 245
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE) HSP 1 Score: 359 bits (922), Expect = 3.540e-110 Identity = 240/429 (55.94%), Postives = 241/429 (56.18%), Query Frame = 0
Query: 56 MGGDDGLQSAGAPSESRRLELRFPQKNTAGTGKAKVSKRLQLVH----------------------------------------------------------------------------------------------------------------------GG----------------------------------------------------TSDSAAAAVDWREDRDQRARSGGALNPSAKGKRRSGAGGAGSEGGGKEDEGPPGAEDGAAE-LRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
MGGDDGLQSA APSESRRLELRF QKNTAGTGKAKVSKRLQLV GG TSDSAA A DWRE+ DQRARSGGALN SAKGKR GAGG GSEGGGKE EGPPGAEDGAAE LRFDPLR LEYLKSLPIYEDQAVYSETLPGRAGEYEDT RPLH EVKAALERSKGV RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVG RPDAVALYLFPTKALAQDQLRSLK LVGASPYLSERVRPMTLDGDTPFRE
Sbjct: 1 MGGDDGLQSARAPSESRRLELRFLQKNTAGTGKAKVSKRLQLVRQAMLDHAEGRTRRLPDGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTAAVTALGCDQGSRSANNGSGSXXXXXXXXXXXXXXXXXXXXXXXXGEFCGKGGKRGARTSAPGGNHHDRASRAGVDSRGKRPPATGTALSLLAPLSDSPAYTTVCGXXXXXXXXXXTSDSAAQAADWRENHDQRARSGGALNRSAKGKRPRGAGGTGSEGGGKEVEGPPGAEDGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTKRPLHPEVKAALERSKGVARLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASPYLSERVRPMTLDGDTPFRE 429
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFF7_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.320e-36 Identity = 80/137 (58.39%), Postives = 98/137 (71.53%), Query Frame = 0
Query: 175 KSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKA----ALERSKGVTRLFKHQALAIDAAAA-GRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLD 306
K LP Y DQ ++ ETLP RAGE+ + L L E+ AL++SKG++RLF+HQA AIDAA G HVALST TSSGKSV FNV V+ +V +PDAVA+YLFPTKALAQDQL S + L+G SP L V P+T+D
Sbjct: 1 KGLPFYRDQVMHVETLPPRAGEFVE-LSDLAVEIAPCVLEALQKSKGISRLFRHQADAIDAAVGHGMHVALSTGTSSGKSVAFNVPVLHRLV-EQPDAVAIYLFPTKALAQDQLGSFQGLIGGSPALESSVLPLTVD 135
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5) HSP 1 Score: 129 bits (323), Expect = 1.900e-29 Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 0
Query: 164 RFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFR 312
+FDP L++L LP+ + +++ ETLP RA + + RPL + ++ L G+ RLF HQA ++AA G HV +STATSSGKS+V+++ +EA++ + VALY+FPTKALAQDQLRSL+E VGA +L + VR LD DTP R
Sbjct: 254 QFDPKEILDHLLRLPLAKGHSLHVETLPARAPVFGELERPLPSPLQHTLA-DLGIQRLFSHQAEGVNAARDGAHVMISTATSSGKSLVYHLPTMEALLSDPHNTVALYIFPTKALAQDQLRSLREFVGAG-WLGDAVRADCLDADTPAR 400
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Probable (ATP-dependent helicase hrq1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S2L8_9CHLO) HSP 1 Score: 127 bits (320), Expect = 5.020e-29 Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 0
Query: 167 PLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTL-DGDTP 310
P L +L+++ Y+DQ V++E +P RA +Y + PL + V+AAL ++GVT LF HQA AIDAA AG+HV + T+T+SGKS+ +N+ ++EA+V P A ALY+FPTKALAQDQLR+LKEL A+ ++ + + DGDTP
Sbjct: 605 PEAFLAHLRTVSWYKDQIVHTEQIPARAAQYSEPAAPLSSPVRAALS-ARGVTHLFTHQAQAIDAARAGKHVVVCTSTASGKSLCYNLPILEALVRD-PQATALYMFPTKALAQDQLRALKELCAAA--FGDKAPCIDIYDGDTP 745
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYB9_CAFRO) HSP 1 Score: 120 bits (302), Expect = 9.830e-27 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 0
Query: 152 GPPGAEDGAAELRFDPLRTLEYLKSL-PIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDT 309
GP + EL P+ + SL P Y DQ + T+ R ++ D RP+H ++ A+ ++G+T+ F+HQ+LAIDAA AG+HV +ST+TSSGKS+VF+V V + ++ R AVA+ +FPTKALAQDQLR+++E S L+ VR TLDGD+
Sbjct: 192 GPSKPDLSMVELTLRPVGSSMQRSSLRPWYVDQLRHVHTILPRPAKFRDVERPVHPAIRMAMH-ARGITKFFEHQSLAIDAALAGKHVVISTSTSSGKSLVFSVPVFDRLLRDRA-AVAILIFPTKALAQDQLRAVREFCRGSATLASAVRAATLDGDS 348
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Helicase (ATP-binding domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497AP77_9CHLR) HSP 1 Score: 112 bits (279), Expect = 3.230e-26 Identity = 70/143 (48.95%), Postives = 92/143 (64.34%), Query Frame = 0
Query: 171 LEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVG---TRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTP 310
LEYLK+ P Y Q V+ E +P R Y + RPL ++ AL+R+ G+ L+ HQA AI+A G +V ++T T+SGK++V+N+ V+EAI+G TR A YLFPTKALAQDQLRSL ELV +R T DGDTP
Sbjct: 8 LEYLKAAPFYRGQIVHVERIPARKARYGELERPLPEPLQQALKRA-GIRGLYTHQADAINAIRRGENVIVATGTASGKTLVYNIPVLEAILGDWRTR----AFYLFPTKALAQDQLRSLGELVNNG---LPSIRYGTYDGDTP 142
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: DEAD/DEAH (box helicase (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C7L1I0_9BACT) HSP 1 Score: 111 bits (278), Expect = 7.910e-26 Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 0
Query: 171 LEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
L LKS Y Q + E LP R Y + +H V+ AL+R+ G+ RL++HQA AI A AG+HVA+ T SSGK++ +N+ V+EA++ T+ + ALY+FPTKALAQDQLR L+EL L E + T DGDTP E
Sbjct: 10 LRELKSQDWYRGQITHIEVLPARGAIYSEPQIAIHHRVRTALQRA-GIQRLYQHQADAIAAIRAGKHVAIITGASSGKTLCYNIPVLEALL-TQREMRALYIFPTKALAQDQLRKLREL-----GLFEHIIAWTYDGDTPVSE 145
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 TaxID=1973912 RepID=A0A2M7KNY8_9BACT) HSP 1 Score: 117 bits (293), Expect = 1.430e-25 Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = 0
Query: 163 LRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
+ D +E LK+ P Y Q V+ E LPGR +Y + PLH + AL R +G+ RL++HQ A+ A AGRHV + TAT+SGK++ +N VIEAI+ R ALYLFPTKALAQDQLR L EL L ++ T DGDTP ++
Sbjct: 1 MPLDCANLVEELKAAPDYNGQIVHHEILPGRRAKYAELDPPLHPSLAEALGR-QGIKRLYQHQVEALTLARAGRHVMVVTATASGKTLCYNAPVIEAILADRGTR-ALYLFPTKALAQDQLRKLNEL-----DLFPTLKAATYDGDTPAKD 144
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: DEAD/DEAH (box helicase (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CKQ6_9BACT) HSP 1 Score: 114 bits (284), Expect = 1.970e-25 Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 0
Query: 180 YEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTP 310
Y Q E LP R Y PLH ++ L R++G+ L+ HQA AIDA AAGR+V + T T+SGK++ +N+ V+++++ + P+A ALYLFPTKALAQDQL +LK L A LS VRP T DGDTP
Sbjct: 16 YRGQIAAVEELPARPARYAPPQTPLHPVLRQML-RAEGIEELYLHQARAIDALAAGRNVVVVTGTASGKTMCYNLPVLQSLLES-PEARALYLFPTKALAQDQLGTLKRLAAADLILSGTVRPATYDGDTP 144 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig9812.17901.1 ID=prot_Ecto-sp9_F_contig9812.17901.1|Name=mRNA_Ecto-sp9_F_contig9812.17901.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=316bpback to top |