prot_Ecto-sp9_F_contig980.17892.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig980.17892.1
Unique Nameprot_Ecto-sp9_F_contig980.17892.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length482
Homology
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: Similar (to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 823 bits (2126), Expect = 5.500e-299
Identity = 440/481 (91.48%), Postives = 449/481 (93.35%), Query Frame = 0
Query:    1 METCNLPGFYVDPPAFDIELEEFGTLPMRRLEAVRLLREGQTTPAQVSEASPAQKALTADARLLLPDGHGDRPSEAKHQRADLASHFILKLACCGGKGGEVQPGTEASKRDDSSGRCEEVDRRSSRREWFVRAEKDLFKARLHWHLQQNEGGGSKEGIAGRCNGGTSSTDIGARASIADRLEALRLFYNLEWLQPVGPAAPYCSRMEKQRESGHESSYAREGVSTSSXXXXXXXXXXXXXXXXXXXXXXXRDGDDPFREHYRSSTPGACSSGDASHGTLERQLPPSSKRKKLPQSFAVKGGGDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARKRNQLSAL 481
            METC  PG YVDPP FDIELEEFGTLPMRRLEAVRLLREGQTTPAQV EASPAQKALTADARLLL  GHGDRPSEAK+QRADLASHFILKLACCG  GG VQPGTEASKRDDSSGRCEEVDRRSSRREWFVRAE+DLF+ARLHWHLQQNEGGGSKEGIAGRCNGG SS D+GARASIADRLEALR+FYNLEWLQPVGPAAP CSRMEKQRESGHE S+AREGV TSS      XXXXXXXXXXXXXXXXX DGDDPFREH RS +PGACS GDASH TLERQLPPSS+RKKLP+S A KGG DIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEAD RVAEVLRQVR AVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFL NAGMEVDEILGLWREEFPKGMPADEYARKRNQLSAL
Sbjct:    1 METCKPPGLYVDPPDFDIELEEFGTLPMRRLEAVRLLREGQTTPAQVPEASPAQKALTADARLLLLHGHGDRPSEAKNQRADLASHFILKLACCGATGGGVQPGTEASKRDDSSGRCEEVDRRSSRREWFVRAERDLFEARLHWHLQQNEGGGSKEGIAGRCNGGASSADLGARASIADRLEALRIFYNLEWLQPVGPAAPDCSRMEKQRESGHEGSHAREGVCTSSYGGKGCXXXXXXXXXXXXXXXXXXDGDDPFREHSRSYSPGACSRGDASHVTLERQLPPSSERKKLPESVAFKGGSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQLSAL 481          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 102 bits (253), Expect = 1.670e-19
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 0
Query:  306 YLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAI---ITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            +   PF +VL L+++R+V L  G A +  + L   VV  +   L   LA+  R LP +E D R+  +L  + +            G D  N+  +    IT   ID L++  FPLCMR     LR+ HHLKY  RLQ   FL   G+ +D+ L  WREEF K M +D++ ++
Sbjct:  191 FYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLSTLHQRYI---------GTDYSNKKASFTGEITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFDKQ 353          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE)

HSP 1 Score: 100 bits (250), Expect = 3.940e-19
Identity = 61/172 (35.47%), Postives = 87/172 (50.58%), Query Frame = 0
Query:  306 YLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRS---MAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            +   PF +VL LV++R+V L  G A +  D L   V+  +   L   LAI  R LP +E D R+  +L  + +            G D  N+    +  +T   ID L++  FPLCMR     LR+ HHLKY  RLQ   FL   G+ +D+ L  WREEF K M  D++ ++
Sbjct:  190 FYKVPFIEVLDLVKNRKVFLEKGYAYIPEDDLVITVLSAYRAHLSHALAITSRALPQLEEDTRLISMLSTLHQRYI---------GTDYTNKKPNFIGDVTPDQIDSLSKTSFPLCMRNLHDTLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDVDKFDKQ 352          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit n=3 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2DE49_CYPVA)

HSP 1 Score: 99.8 bits (247), Expect = 9.120e-19
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query:  276 HGTLERQLPPSSKRKKLPQSFAVKGGG--DIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDAD-NRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEY 471
            + T+  Q     K K L  S+ V G    +  +   PF+  L LVR+R+V L+DG A +  + +   V+  F  RL + LA+  R LP V +D+R+  +L  +  +           G D    +++  I+ + ID LA K FPLCMR+  + LR  HHL++  R+Q   FL   G+ +++ L  WR EF +G + AD++
Sbjct:  146 YNTISVQEKNQLKEKLLNSSYIVSGVTLENEDFYKVPFQDALDLVRARKVYLKDGYAFIPHNDIVTIVLNDFRTRLSKALALTARSLPAVHSDERLQPLLNHLSHSY---------LGQDYSIQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRENHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFIRGKVDADKF 336          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit n=3 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2Q406_FUNHE)

HSP 1 Score: 99.4 bits (246), Expect = 1.220e-18
Identity = 61/198 (30.81%), Postives = 102/198 (51.52%), Query Frame = 0
Query:  276 HGTLERQLPPSSKRKKLPQSFAVKGGG-DIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEY 471
            + T+  +     K + L  S  V G   +  +   PF+  L LVR+R+V L++G A +   ++   V+  F  RL + LA+  R LP V +D+R+  +L  +  +       G         +++  I+ + ID LA K FPLCMR+  + LR  HHL+Y  R+Q   FL   G+ +++ L  W+ EF +G + AD++
Sbjct:  147 YNTISGEEKEQLKNELLNSSHGVSGVSLEHDFYKVPFQDALDLVRTRKVYLKEGYAYIPQSEIVAIVLNDFRTRLSKALALTARSLPAVHSDERLQPLLNHLSHSYFGQDYSG--------QKNVGKISLEQIDSLAGKSFPLCMRQLHKALRENHHLRYGGRMQYGLFLKGIGLSLEQALQFWKMEFIQGKVDADKF 336          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL)

HSP 1 Score: 98.2 bits (243), Expect = 1.860e-18
Identity = 66/174 (37.93%), Postives = 90/174 (51.72%), Query Frame = 0
Query:  302 GDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEAD-DRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            G   Y   PF +   LV  R VLL +G A ++ + L E  V HF+  LR  L    R LP  +AD +R++  L ++     SL     R  L   N+    +T +NIDQ+AEKHFPLCM+   R  R  HHLKY  R+Q   FL   G  V E +  +R+EF K +P   + R+
Sbjct:  142 GSSRYFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSLHPA--RSILQPKNQLR--VTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDRE 311          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MHZ5_9AGAM)

HSP 1 Score: 98.2 bits (243), Expect = 2.560e-18
Identity = 66/223 (29.60%), Postives = 107/223 (47.98%), Query Frame = 0
Query:  257 FREHYRSSTPGACSSGDASHG----TLERQLPPSS-KRKKLPQSFAVKGGGDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            FR  Y +S P        +H     T++ Q  P+  K+ +   + A     +  Y   P+ +V  LV +RRV L+ G A +     P  + Q F+  L   L    + LP ++ DDR+  +L  + +   + VSG  R G   D      +T   +D++A KHFP+CMR     LR + HLK+  RLQ   FL   G+ V+E +  WR+ + + M  D++ ++
Sbjct:  122 FRVRYENSAPADREKFIEAHNVGGDTVDVQKDPALLKQLQKVAASAAHATLEKSYYKVPWTQVPDLVATRRVYLKGGFAYVPLSLQPNIIYQKFQQNLERALEQTAKALPRLDEDDRLVPILEHLSKGFVAGVSGEYRAGEGIDGE----VTADMVDEIARKHFPMCMRSLHETLRADRHLKHAGRLQFTLFLKAMGVSVEEAIVFWRKGYGQSMTDDKFNKE 340          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YH99_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.080e-18
Identity = 60/166 (36.14%), Postives = 86/166 (51.81%), Query Frame = 0
Query:  310 PFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEAD-DRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            PF +V  LVR RRV++R G  L+   ++  A + HF+  L++ L   +  +P +  + DR+  VL        SLV   G R        +A      IDQ+AEKHFPLCM++    LR  HHLKY  R+Q   FL   G  V E L  +R EF K +P  ++ ++
Sbjct:   95 PFHEVSALVRQRRVVVRKGCCLIPSHEMDYAALHHFKRSLKQQLGDLQCAIPALGPELDRLTPVLDGFLAKAHSLVGSSGSRSRTRPRLEVA-----GIDQVAEKHFPLCMKQLHHKLRENHHLKYDGRVQYRLFLKGVGFSVYETLQFFRTEFTKKIPPAKFEKE 255          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087SZT7_STEMI)

HSP 1 Score: 97.8 bits (242), Expect = 3.440e-18
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 0
Query:  304 IGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAI---ITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            I +   PF +VL L+++R+V L+ G A +  D +   +   +   L   LAI  R LP +E D R+  +L  + +            G D  NR +     IT + ID L++  FPLCM+     LRR HHLKY  RLQ   FL   G+ +++ L  WR+EF K M  D++ ++
Sbjct:  187 IDFYKVPFVEVLDLIKNRKVFLKKGFAYIPEDDMVITIASAYRAHLSHSLAITSRALPQLEEDTRLISMLSTLHQRYI---------GTDYSNRKVDYAGDITPEFIDGLSKTSFPLCMQNLHETLRRNHHLKYNGRLQYGLFLKGIGLTLEDALRFWRQEFTKIMDNDKFDKQ 351          
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Match: DNA (primase large subunit n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165H454_9APHY)

HSP 1 Score: 97.4 bits (241), Expect = 5.000e-18
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 0
Query:  306 YLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 474
            Y    + +V  LV  RRVLL+ G A +   +    V Q F+ RL + L +  + LP ++ D R+  +L  + +     ++G       A + S   IT   ID LA KHFPLCMR     LRREHHLK+  RLQ   FL   G+ +DE +  WR  F   M  D++ ++
Sbjct:  189 YYKVKWTRVPDLVEKRRVLLKGGMAYVPSREQSSIVFQEFQTRLTKALEMTAKALPRLDEDTRIVPILDNLSQG---FLAGVSSEWSTATSSSAGEITADMIDDLARKHFPLCMRNLHETLRREHHLKHFGRLQYGLFLKVLGLSIDEAITFWRRSF-SNMQDDKFNKE 353          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig980.17892.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Similar5.500e-29991.48to DNA primase large subunit, partial n=2 Tax=Ecto... [more]
DNA1.670e-1934.88primase large subunit n=2 Tax=Parasteatoda tepidar... [more]
DNA3.940e-1935.47primase large subunit n=1 Tax=Araneus ventricosus ... [more]
DNA9.120e-1932.50primase large subunit n=3 Tax=Cyprinodon TaxID=287... [more]
DNA1.220e-1830.81primase large subunit n=3 Tax=Fundulus heteroclitu... [more]
Uncharacterized1.860e-1837.93protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
DNA2.560e-1829.60primase large subunit n=1 Tax=Botryobasidium botry... [more]
Uncharacterized3.080e-1836.14protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
DNA3.440e-1833.91primase large subunit (Fragment) n=2 Tax=Stegodyph... [more]
DNA5.000e-1835.50primase large subunit n=1 Tax=Laetiporus sulphureu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.930.80coord: 4..152
e-value: 1.2E-14
score: 56.2
coord: 279..376
e-value: 3.2E-14
score: 54.8
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 308..472
e-value: 3.9E-31
score: 108.4
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 304..474
coord: 9..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig980contigEcto-sp9_F_contig980:20942..23088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig980.17892.1mRNA_Ecto-sp9_F_contig980.17892.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig980 20187..23088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig980.17892.1 ID=prot_Ecto-sp9_F_contig980.17892.1|Name=mRNA_Ecto-sp9_F_contig980.17892.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=482bp
METCNLPGFYVDPPAFDIELEEFGTLPMRRLEAVRLLREGQTTPAQVSEA
SPAQKALTADARLLLPDGHGDRPSEAKHQRADLASHFILKLACCGGKGGE
VQPGTEASKRDDSSGRCEEVDRRSSRREWFVRAEKDLFKARLHWHLQQNE
GGGSKEGIAGRCNGGTSSTDIGARASIADRLEALRLFYNLEWLQPVGPAA
PYCSRMEKQRESGHESSYAREGVSTSSSGGKGCGGGGGSGSGGGSAGRRR
RDGDDPFREHYRSSTPGACSSGDASHGTLERQLPPSSKRKKLPQSFAVKG
GGDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLR
EGLAIAERGLPGVEADDRVAEVLRQVRRAVDSLVSGGGRRGLDADNRSMA
IITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGME
VDEILGLWREEFPKGMPADEYARKRNQLSAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc