prot_Ecto-sp9_F_contig9796.17882.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9796.17882.1
Unique Nameprot_Ecto-sp9_F_contig9796.17882.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length189
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9796.17882.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST9_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 1.110e-71
Identity = 118/131 (90.08%), Postives = 123/131 (93.89%), Query Frame = 0 
Query:   48 LRCSSTGKLLYRGRVEEGSNCPANIAKKLELLAEREPVGIVKMLAASSETPGGLPAVLREAEGLRDLEVLVKNLGGDLSINLLDQEGAEVLEATIGECNNGDGSFHQPGADLKTAKIHRASQAALKVSTSG 178
            LR +  G  + RGRV+EGSNCPANIAKKLELLAEREPVGIVKMLAASSETPGGLPAVLREAEGLRDLEVLVKNLGGDLSINLL+QEGAEVLEATIGECNNGDGSFHQPGADLKTAKIHRASQAALKV+  G
Sbjct:   29 LRWNIYGVCIRRGRVKEGSNCPANIAKKLELLAEREPVGIVKMLAASSETPGGLPAVLREAEGLRDLEVLVKNLGGDLSINLLNQEGAEVLEATIGECNNGDGSFHQPGADLKTAKIHRASQAALKVAMEG 159
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9796.17882.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK49_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.460e-21
Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 0 
Query:   90 MLAASSETPGGLPAVLREAEGLRDLEVLVKNLGGDLSINLLDQEGAEVLEATIGECNNGDGSFHQPGAD-LKTAKIHRASQAALKVSTSGTSVLECNINYG 189
            MLA++S    GLPA LR A+GLR  +   + LGG  SINL + E   VLEATIGECNNG+ +FH+  A+  KTAK+ RASQ  +K+S SGT V E N+N G
Sbjct:    1 MLASTSGMSVGLPATLRAAQGLRGQKNSCEQLGGQKSINLDEGEDTRVLEATIGECNNGESNFHERVAEPTKTAKVLRASQTTIKLSNSGTGVFEKNVNDG 101
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9796.17882.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.110e-7190.08protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.460e-2154.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9796contigEcto-sp9_F_contig9796:964..2528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9796.17882.1mRNA_Ecto-sp9_F_contig9796.17882.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9796 964..2528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9796.17882.1 ID=prot_Ecto-sp9_F_contig9796.17882.1|Name=mRNA_Ecto-sp9_F_contig9796.17882.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=189bp
PTRRKRRLEARTPSNKRPRRLGFGEEEEEEEDEVEAGEPDESDLRRRLRC
SSTGKLLYRGRVEEGSNCPANIAKKLELLAEREPVGIVKMLAASSETPGG
LPAVLREAEGLRDLEVLVKNLGGDLSINLLDQEGAEVLEATIGECNNGDG
SFHQPGADLKTAKIHRASQAALKVSTSGTSVLECNINYG
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