mRNA_Ecto-sp9_F_contig97.17802.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: AAA (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE) HSP 1 Score: 300 bits (767), Expect = 1.660e-96 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 1
Query: 1 ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMV FDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM
Sbjct: 410 ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVRFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 561
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.230e-76 Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 1
Query: 1 ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
AS KGLLLFVDEADAFLRRR+TE ISEDLRNALNAFLYRTGE+TDKFMLVYASNQPEQFDWAVNDRIDEMVPF+LPGR+ER+RM+NLYM +LL GKAK I V G+EDSHLQ AD TEGFSGREI+KLAIAWQAAAYG+ ++F ELM
Sbjct: 396 ASNKGLLLFVDEADAFLRRRSTERISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFELPGRDERMRMINLYMNKFLLAKTGKAKTIVVQGVEDSHLQAAADATEGFSGREISKLAIAWQAAAYGSAGTTFTPELM 547
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4I1_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.390e-71 Identity = 115/154 (74.68%), Postives = 128/154 (83.12%), Query Frame = 1
Query: 1 ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAK--VIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
AS KGLLLFVDEADAFLRRR+ E ISEDLRNALNAFLYRTGE+T KFMLVYASNQP+QFDWA+NDRIDEMV F LPG EER RMV+LYMK YLLD AK I V+ IED+H+ + A TE FSGREIAKLAIAWQAAAYG+ D++FN +M
Sbjct: 50 ASNKGLLLFVDEADAFLRRRSVEHISEDLRNALNAFLYRTGEATGKFMLVYASNQPDQFDWAINDRIDEMVEFQLPGLEERKRMVSLYMKKYLLDQQDAAKGRAITVEDIEDNHIDEAAKATEHFSGREIAKLAIAWQAAAYGSVDATFNPSIM 203
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW12_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.960e-69 Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 1
Query: 1 ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDP--------PGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
AS +GLLLF+DE+DAFLR+R+TE +SEDLRNALNAFLYRTGE T+KFMLVYASNQPEQFDWA+NDRIDEMV F LP +EER+RM+ LYM YL P K++ V+G+EDS+++ +AD TEGFSGREI+KLAIAWQAAAYG+ D++F ELM
Sbjct: 62 ASNRGLLLFIDESDAFLRKRSTEAMSEDLRNALNAFLYRTGEPTNKFMLVYASNQPEQFDWAINDRIDEMVEFALPSKEERVRMIQLYMDKYLYRSGEGGGFFSPASTKIL-VNGVEDSNIESIADRTEGFSGREISKLAIAWQAAAYGSADATFTVELM 220
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKW4_9STRA) HSP 1 Score: 206 bits (525), Expect = 6.300e-63 Identity = 96/149 (64.43%), Postives = 128/149 (85.91%), Query Frame = 1
Query: 10 KGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
KG+L+FVDEADAFLR+R+TE ISED+RNALNAFLYRTGE++ KFM+VYASNQPEQFDWA+NDRID+MV F LP +ER+RM++ YM ++LL PP +K I V+G++++ ++ A TEG+SGREI+KLAIAWQAAAYGT +++ + +L+
Sbjct: 206 KGVLIFVDEADAFLRKRSTERISEDMRNALNAFLYRTGEASYKFMIVYASNQPEQFDWAINDRIDDMVEFRLPSFDERVRMISQYMDSFLLHPPAGSKTITVEGVDEALIRSFASATEGYSGREISKLAIAWQAAAYGTDNATIDVDLL 354
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA) HSP 1 Score: 207 bits (528), Expect = 4.830e-62 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 1
Query: 4 SRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAK-----VIRVDGIE---DSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
S+KGLLLF+DE+DAFLR+R+TE ISEDLRNALNAFLYRTGE TDKFMLVYASNQPEQFDWAVNDRIDEMV FDLPG EER RM+++Y+ YL D G + V+ DG D L A T+GFSGREIAKLAIAWQA+AYG+ D++F +L+
Sbjct: 329 SKKGLLLFIDESDAFLRKRSTENISEDLRNALNAFLYRTGEPTDKFMLVYASNQPEQFDWAVNDRIDEMVEFDLPGLEERRRMIDMYLSKYLRDAEGSSSGAKKIVVSFDGEGGGYDKILDQAAARTDGFSGREIAKLAIAWQASAYGSSDNTFTEQLL 487
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: AAA (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L2_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.740e-61 Identity = 104/151 (68.87%), Postives = 122/151 (80.79%), Query Frame = 1
Query: 4 SRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
SR+G++LFVDEADAFLRRR+TE ISED+RNALNAFLYRTGE+TD+FM+VYASNQPEQFD A+NDRIDE+VPFDLPG EER RM++ YM YLL+ I G+E+ H+ A TEGFSGREI+KLAIAWQAAAYG+ F ELM
Sbjct: 366 SRRGVVLFVDEADAFLRRRSTEVISEDMRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDELVPFDLPGVEERRRMLDSYMLKYLLEAHAARSGIAALGVEEHHMAAAAAATEGFSGREISKLAIAWQAAAYGSEKCEFTPELM 516
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: AAA (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA) HSP 1 Score: 206 bits (525), Expect = 7.080e-61 Identity = 101/146 (69.18%), Postives = 126/146 (86.30%), Query Frame = 1
Query: 4 SRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPG-KAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSS 438
+RKG+LLFVDEADAFLRRR+TE +SE+LRNALNAFLYRTGE++DKFM+V+ASNQPEQFDWA+NDRIDEMV F+LPG EERL MV +Y++ Y+L+PP KA+ I V+GI + ++ A +T GFSGREI+KLAIAWQAAAYG + +
Sbjct: 402 TRKGVLLFVDEADAFLRRRSTEHMSEELRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMVDFNLPGEEERLEMVTIYLEKYVLNPPSTKARPITVEGIGEEEVKYAAKVTVGFSGREISKLAIAWQAAAYGAREGA 547
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1G8_9STRA) HSP 1 Score: 192 bits (489), Expect = 9.410e-60 Identity = 105/169 (62.13%), Postives = 121/169 (71.60%), Query Frame = 1
Query: 25 FVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLD----------------PPGKA---------KVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
FVDEADAFLRRR+TE ISEDLRNALNAFLYRTGE+TD+FM+VYASNQPEQFD A+NDRIDEMV F LPG EER RM+ Y+++YLLD P GK+ + VDGIE+ H++ AD TEGFSGREI+KLAIAWQAAAYG + F LM
Sbjct: 1 FVDEADAFLRRRSTEQISEDLRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDEMVHFKLPGLEERQRMLTHYLRHYLLDGHHHGEDIFDQKTDGKPAGKSVSGFFGAAPTQVTVDGIEERHIRFAADRTEGFSGREISKLAIAWQAAAYGNEKAHFTPALM 169
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WET7_9STRA) HSP 1 Score: 195 bits (496), Expect = 5.850e-59 Identity = 95/151 (62.91%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 4 SRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELM 456
SR+GLLLFVDE+DAFLR+R+T+ ISED+RNALNAFL+RTGE++DKFM+VYASNQPEQFDWA+NDRIDEMV F LPG EER RM+ YM + L P + D ++++ + TE FSGREI+KLAIAWQAAAYGT + N +L+
Sbjct: 167 SRRGLLLFVDESDAFLRKRSTQYISEDMRNALNAFLFRTGEASDKFMIVYASNQPEQFDWAINDRIDEMVEFALPGFEERRRMIAYYMHSLLSSPTQATPITIADDVDEAAVDSAVHATENFSGREISKLAIAWQAAAYGTSPPTLNLQLL 317 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig97.17802.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig97.17802.1 >prot_Ecto-sp9_F_contig97.17802.1 ID=prot_Ecto-sp9_F_contig97.17802.1|Name=mRNA_Ecto-sp9_F_contig97.17802.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=152bp ASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVback to top mRNA from alignment at Ecto-sp9_F_contig97:15461..17104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig97.17802.1 ID=mRNA_Ecto-sp9_F_contig97.17802.1|Name=mRNA_Ecto-sp9_F_contig97.17802.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1644bp|location=Sequence derived from alignment at Ecto-sp9_F_contig97:15461..17104- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig97:15461..17104- >mRNA_Ecto-sp9_F_contig97.17802.1 ID=mRNA_Ecto-sp9_F_contig97.17802.1|Name=mRNA_Ecto-sp9_F_contig97.17802.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp9_F_contig97:15461..17104- (Ectocarpus species9 EcSCA_722f female)back to top |