prot_Ecto-sp9_F_contig9673.17774.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9673.17774.1
Unique Nameprot_Ecto-sp9_F_contig9673.17774.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length348
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9673.17774.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA9_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 4.140e-197
Identity = 295/313 (94.25%), Postives = 298/313 (95.21%), Query Frame = 0 
Query:   36 RAENFQLDTTLPMSAETFARLARSQEFYRSTRAETKLSKQQVMELGDWVVWEFQNEDEEAPRSSGNSEEVVPHPPLDRIRPACLGLEGGGLEGRPGSHPSATTGQGGQQTAVVADTKMQMVRNLRRIYAAASSPTPXXXXXDGAGAQTAVSVAHNMFSNVGARRPGPFLRPHRHXXXXXXXXX-GEPQQMYRKVRLKYAVSSPIGSSQNEGAQGHTLREGEDEVTYTETDCISGLPMFRGNLVVKTTFRVTRSEHDPENSVRVKVCVVVGDVKLSRAIAWLSKGVKYAIRDSGTKQAAKTLQDMVEAKSKAWL 347
            RAEN QLDTTLP+SAE FARLARSQEFYRSTRAETKLSKQQVMELGDWVVWEFQNEDEEAPRSS NSEEVVP+PPLDRIRP CLGLEGGGL+GRPGSHPSATTGQG QQTAVVADTKMQMVRNLRRIYAAASSPT      DGAGAQTAVSVAHNMFSNV ARRPGPFLRPHRH XXXXXXXX  EPQQMYRKVRLKYAVSSPIGSSQNEGAQGHTLREGEDEVTYTETDCISGLPMFRGNLVVKTTFRVTRSEHDPENSVRVKVCVVVGDVKLSRAIAWLSKGVKYAIRDSGTKQAAKTLQDMVEAKSKAWL
Sbjct:    9 RAENVQLDTTLPISAEMFARLARSQEFYRSTRAETKLSKQQVMELGDWVVWEFQNEDEEAPRSSRNSEEVVPYPPLDRIRPVCLGLEGGGLQGRPGSHPSATTGQGAQQTAVVADTKMQMVRNLRRIYAAASSPTHSPPQPDGAGAQTAVSVAHNMFSNVVARRPGPFLRPHRHQXXXXXXXXXSEPQQMYRKVRLKYAVSSPIGSSQNEGAQGHTLREGEDEVTYTETDCISGLPMFRGNLVVKTTFRVTRSEHDPENSVRVKVCVVVGDVKLSRAIAWLSKGVKYAIRDSGTKQAAKTLQDMVEAKSKAWL 321
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9673.17774.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB0_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.770e-48
Identity = 121/268 (45.15%), Postives = 143/268 (53.36%), Query Frame = 0 
Query:   77 VMELGDWVVWEFQNEDEEAPRSSGNSEEVVPHPPLDRIRPACLGLEGGGLEGRPGSHPSATTGQGGQQTAVVADTKMQMVRNLRRIYAAASSPTPXXXXXDGAGAQTAVSVAHNMFSNVGARRPGPFLRPHRHXXXXXXXXXGEPQQMYRKVRLKYAVSSPIGSSQNEGAQGHTLREGEDEVTYTETDCISGLPMFRGNLVVKTTFRVTRSEHDPENSVRVKVCVVVGDVKLSRAIAWL-SKGVKYAIRDSGTKQAAKTLQDMV-EAK 342
            V+E+GDWV WEFQ EDEE    S   +E+VP PP         G + GGL+G              +Q    A+ K   V                       G    +   H      G +                      P+Q+YRK+RL+ +VSSP G+S N+  QGHTL E EDEVTYTETDCIS LPMFRGNLVVKTTFRVTRSE DPENSVRVKV VVV DVKL R + WL SK V+ ++RD G KQAA T+  MV EAK
Sbjct: 1003 VVEIGDWVPWEFQCEDEEVLSKSEELQEIVPSPPR--------GGKYGGLKG--------------EQKPPNAEPKRPEV-----------------------GKNNNIGGGHGEEKTSGEK----------------------PRQIYRKIRLRTSVSSPFGTSHNDALQGHTLSESEDEVTYTETDCISKLPMFRGNLVVKTTFRVTRSEDDPENSVRVKVTVVVRDVKLIRGMGWLMSKAVQKSVRDGGKKQAANTMNAMVLEAK 1203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9673.17774.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.140e-19794.25protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.770e-4845.15protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..37
score: 0.749

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9673contigEcto-sp9_F_contig9673:967..5003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9673.17774.1mRNA_Ecto-sp9_F_contig9673.17774.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9673 91..5029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9673.17774.1 ID=prot_Ecto-sp9_F_contig9673.17774.1|Name=mRNA_Ecto-sp9_F_contig9673.17774.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=348bp
MAHNSMSSMAMSWSSRCLSLSLVWITLLDIDVASVRAENFQLDTTLPMSA
ETFARLARSQEFYRSTRAETKLSKQQVMELGDWVVWEFQNEDEEAPRSSG
NSEEVVPHPPLDRIRPACLGLEGGGLEGRPGSHPSATTGQGGQQTAVVAD
TKMQMVRNLRRIYAAASSPTPSPPQPDGAGAQTAVSVAHNMFSNVGARRP
GPFLRPHRHQQQQQQQRQGEPQQMYRKVRLKYAVSSPIGSSQNEGAQGHT
LREGEDEVTYTETDCISGLPMFRGNLVVKTTFRVTRSEHDPENSVRVKVC
VVVGDVKLSRAIAWLSKGVKYAIRDSGTKQAAKTLQDMVEAKSKAWL*
back to top